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Title: Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica

Abstract

Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

Authors:
 [1];  [1];  [2];  [1];  [2];  [2];  [2];  [2];  [2];  [2];  [3];  [4];  [1]
  1. McGill Univ., Montreal, QC (Canada)
  2. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  3. National Research Council Canada, Montreal, QC (Canada)
  4. Pennsylvania State University, Altoona, PA (United States). Altoona College
Publication Date:
Research Org.:
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
OSTI Identifier:
1378776
Grant/Contract Number:  
AC02-05CH11231
Resource Type:
Accepted Manuscript
Journal Name:
Genome Announcements
Additional Journal Information:
Journal Volume: 4; Journal Issue: 2; Journal ID: ISSN 2169-8287
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; 54 ENVIRONMENTAL SCIENCES

Citation Formats

Goordial, Jacqueline, Raymond-Bouchard, Isabelle, Riley, Robert, Ronholm, Jennifer, Shapiro, Nicole, Woyke, Tanja, LaButti, Kurt M., Tice, Hope, Amirebrahimi, Mojgan, Grigoriev, Igor V., Greer, Charles, Bakermans, Corien, and Whyte, Lyle. Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica. United States: N. p., 2016. Web. doi:10.1128/genomeA.00069-16.
Goordial, Jacqueline, Raymond-Bouchard, Isabelle, Riley, Robert, Ronholm, Jennifer, Shapiro, Nicole, Woyke, Tanja, LaButti, Kurt M., Tice, Hope, Amirebrahimi, Mojgan, Grigoriev, Igor V., Greer, Charles, Bakermans, Corien, & Whyte, Lyle. Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica. United States. doi:10.1128/genomeA.00069-16.
Goordial, Jacqueline, Raymond-Bouchard, Isabelle, Riley, Robert, Ronholm, Jennifer, Shapiro, Nicole, Woyke, Tanja, LaButti, Kurt M., Tice, Hope, Amirebrahimi, Mojgan, Grigoriev, Igor V., Greer, Charles, Bakermans, Corien, and Whyte, Lyle. Thu . "Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica". United States. doi:10.1128/genomeA.00069-16. https://www.osti.gov/servlets/purl/1378776.
@article{osti_1378776,
title = {Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica},
author = {Goordial, Jacqueline and Raymond-Bouchard, Isabelle and Riley, Robert and Ronholm, Jennifer and Shapiro, Nicole and Woyke, Tanja and LaButti, Kurt M. and Tice, Hope and Amirebrahimi, Mojgan and Grigoriev, Igor V. and Greer, Charles and Bakermans, Corien and Whyte, Lyle},
abstractNote = {Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.},
doi = {10.1128/genomeA.00069-16},
journal = {Genome Announcements},
number = 2,
volume = 4,
place = {United States},
year = {2016},
month = {3}
}

Journal Article:
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