Direct single-molecule measurements of phycocyanobilin photophysics in monomeric C-phycocyanin
Abstract
Phycobilisomes are highly organized pigment-protein antenna complexes found in the photosynthetic apparatus of cyanobacteria and rhodophyta that harvest solar energy and transport it to the reaction center. A detailed bottom-up model of pigment organization and energy transfer in phycobilisomes is essential to understanding photosynthesis in these organisms, and informing rational design of artificial light-harvesting systems. Particularly, heterogeneous photophysical behaviors of these proteins, which cannot be predicted de novo, may play an essential role in rapid light adaptation and photoprotection. Furthermore, the delicate architecture of these pigment-protein scaffolds sensitizes them to external perturbations, e.g: surface attachment, which can be avoided by study in free solution or in vivo. We present the first single-molecule characterization of C-phycocyanin (C-PC), a three-pigment biliprotein that self-assembles to form the mid-antenna rods of cyanobacterial phycobilisomes. Using the Anti-Brownian Electrokinetic (ABEL) trap to counteract Brownian motion of single particles in real-time, we directly monitor the changing photophysical states of individual C-PC monomers from Spirulina platensis in free solution by simultaneous readout of their brightness, fluorescence anisotropy, fluorescence lifetime, and emission spectra. These include single-chromophore emission states for each of the three covalently bound phycocyanobilins, providing the first direct measurement of the spectra and photophysics of these chemicallymore »
- Authors:
-
- Department of Chemistry, Stanford University, Stanford, CA 94305
- Publication Date:
- Research Org.:
- Stanford Univ., CA (United States). Dept. of Chemistry
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES)
- OSTI Identifier:
- 1377085
- Alternate Identifier(s):
- OSTI ID: 1377406
- Grant/Contract Number:
- FG02-07ER15892
- Resource Type:
- Published Article
- Journal Name:
- Proceedings of the National Academy of Sciences of the United States of America
- Additional Journal Information:
- Journal Name: Proceedings of the National Academy of Sciences of the United States of America Journal Volume: 114 Journal Issue: 37; Journal ID: ISSN 0027-8424
- Publisher:
- Proceedings of the National Academy of Sciences
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY; 59 BASIC BIOLOGICAL SCIENCES; photosynthetic protein; C-phycocyanin; ABEL trap; single-molecule spectroscopy; photodynamics
Citation Formats
Squires, Allison H., and Moerner, W. E. Direct single-molecule measurements of phycocyanobilin photophysics in monomeric C-phycocyanin. United States: N. p., 2017.
Web. doi:10.1073/pnas.1705435114.
Squires, Allison H., & Moerner, W. E. Direct single-molecule measurements of phycocyanobilin photophysics in monomeric C-phycocyanin. United States. https://doi.org/10.1073/pnas.1705435114
Squires, Allison H., and Moerner, W. E. Mon .
"Direct single-molecule measurements of phycocyanobilin photophysics in monomeric C-phycocyanin". United States. https://doi.org/10.1073/pnas.1705435114.
@article{osti_1377085,
title = {Direct single-molecule measurements of phycocyanobilin photophysics in monomeric C-phycocyanin},
author = {Squires, Allison H. and Moerner, W. E.},
abstractNote = {Phycobilisomes are highly organized pigment-protein antenna complexes found in the photosynthetic apparatus of cyanobacteria and rhodophyta that harvest solar energy and transport it to the reaction center. A detailed bottom-up model of pigment organization and energy transfer in phycobilisomes is essential to understanding photosynthesis in these organisms, and informing rational design of artificial light-harvesting systems. Particularly, heterogeneous photophysical behaviors of these proteins, which cannot be predicted de novo, may play an essential role in rapid light adaptation and photoprotection. Furthermore, the delicate architecture of these pigment-protein scaffolds sensitizes them to external perturbations, e.g: surface attachment, which can be avoided by study in free solution or in vivo. We present the first single-molecule characterization of C-phycocyanin (C-PC), a three-pigment biliprotein that self-assembles to form the mid-antenna rods of cyanobacterial phycobilisomes. Using the Anti-Brownian Electrokinetic (ABEL) trap to counteract Brownian motion of single particles in real-time, we directly monitor the changing photophysical states of individual C-PC monomers from Spirulina platensis in free solution by simultaneous readout of their brightness, fluorescence anisotropy, fluorescence lifetime, and emission spectra. These include single-chromophore emission states for each of the three covalently bound phycocyanobilins, providing the first direct measurement of the spectra and photophysics of these chemically identical molecules in their native protein environment. We also further show that a simple Förster Resonant Energy Transfer (FRET) network model accurately predicts the observed photophysical states of C-PC, and suggests highly variable quenching behavior of one of the chromophores, which should inform future studies of higher-order complexes.},
doi = {10.1073/pnas.1705435114},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
number = 37,
volume = 114,
place = {United States},
year = {2017},
month = {8}
}
https://doi.org/10.1073/pnas.1705435114
Web of Science
Works referenced in this record:
Estimating the Dimension of a Model
journal, March 1978
- Schwarz, Gideon
- The Annals of Statistics, Vol. 6, Issue 2
Unraveling the Electronic Structure of Individual Photosynthetic Pigment-Protein Complexes
journal, July 1999
- van Oijen, A. M.
- Science, Vol. 285, Issue 5426
Light Harvesting by Phycobilisomes
journal, June 1985
- Glazer, A. N.
- Annual Review of Biophysics and Biophysical Chemistry, Vol. 14, Issue 1, p. 47-77
Effect of salts on C-phycocyanin
journal, October 1971
- MacColl, Robert; Berns, Donald S.; Koven, Norman L.
- Archives of Biochemistry and Biophysics, Vol. 146, Issue 2
Single-molecule spectroscopy reveals photosynthetic LH2 complexes switch between emissive states
journal, June 2013
- Schlau-Cohen, G. S.; Wang, Q.; Southall, J.
- Proceedings of the National Academy of Sciences, Vol. 110, Issue 27
Time-resolved polarized absorption of C-phycocyanin from the cyanobacterium Westiellopsis prolifica
journal, July 1993
- Xia, Andong; Zhu, Jinchang; Wu, Huaju
- Journal of Photochemistry and Photobiology B: Biology, Vol. 19, Issue 2
Isolation and characterization of phycocyanins from the blue-green alga Spirulina platensis
journal, January 1979
- Boussiba, Samy; Richmond, Amos E.
- Archives of Microbiology, Vol. 120, Issue 2
Isolation and spectral characterization of phycobiliproteins
journal, January 1970
- Teale, F. W. J.; Dale, R. E.
- Biochemical Journal, Vol. 116, Issue 2
Dissecting pigment architecture of individual photosynthetic antenna complexes in solution
journal, October 2015
- Wang, Quan; Moerner, W. E.
- Proceedings of the National Academy of Sciences, Vol. 112, Issue 45
Allophycocyanin and phycocyanin crystal structures reveal facets of phycobilisome assembly
journal, March 2013
- Marx, Ailie; Adir, Noam
- Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1827, Issue 3
Structure and molecular organization of the photosynthetic accessory pigments of cyanobacteria and red algae
journal, January 1977
- Glazer, Alexander N.
- Molecular and Cellular Biochemistry, Vol. 18, Issue 2-3
Studies on chromophore coupling in isolated phycobiliproteins
journal, January 1990
- Holzwarth, Alfred R.; Bittersmann, Edith; Reuter, Wolfgang
- Biophysical Journal, Vol. 57, Issue 1
Structure of C-phycocyanin from Spirulina platensis at 2.2 Å resolution: a novel monoclinic crystal form for phycobiliproteins in phycobilisomes
journal, May 2001
- Wang, Xin-Quan; Li, Le-Nong; Chang, Wen-Rui
- Acta Crystallographica Section D Biological Crystallography, Vol. 57, Issue 6
Single-Molecule Identification of Quenched and Unquenched States of LHCII
journal, February 2015
- Schlau-Cohen, Gabriela S.; Yang, Hsiang-Yu; Krüger, Tjaart P. J.
- The Journal of Physical Chemistry Letters, Vol. 6, Issue 5
Lifetime and Spectrally Resolved Characterization of the Photodynamics of Single Fluorophores in Solution Using the Anti-Brownian Electrokinetic Trap
journal, November 2012
- Wang, Quan; Moerner, W. E.
- The Journal of Physical Chemistry B, Vol. 117, Issue 16
The microenvironment around the chromophores and its changes due to the association states in C-phycocyanin isolated from the cyanobacterium Mastigocladus laminosus
journal, October 1986
- Mimuro, Mamoru; Rümbeli, Robert; Füglistaller, Paul
- Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 851, Issue 3
Time-Dependent Fluorescence Depolarization Analysis in Three-Dimensional Microspectroscopy
journal, February 1995
- Koshioka, Masanori; Sasaki, Keiji; Masuhara, Hiroshi
- Applied Spectroscopy, Vol. 49, Issue 2
Elucidation of the molecular structures of components of the phycobilisome: reconstructing a giant
journal, July 2005
- Adir, Noam
- Photosynthesis Research, Vol. 85, Issue 1
Detection of Intensity Change Points in Time-Resolved Single-Molecule Measurements
journal, January 2005
- Watkins, Lucas P.; Yang, Haw
- The Journal of Physical Chemistry B, Vol. 109, Issue 1
Excitation transfer in C-phycocyanin. Förster transfer rate and exciton calculations based on new crystal structure data for C-phycocyanins from Agmenellum quadruplicatum and Mastigocladus laminosus
journal, November 1988
- Sauer, Kenneth; Scheer, Hugo
- Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 936, Issue 2
Comparison of Calculated and Experimentally Resolved Rate Constants for Excitation Energy Transfer in C-Phycocyanin. 1. Monomers
journal, May 1995
- Debreczeny, Martin P.; Sauer, Kenneth; Zhou, Jianhui
- The Journal of Physical Chemistry, Vol. 99, Issue 20
Cyanobacterial Phycobilisomes
journal, December 1998
- MacColl, Robert
- Journal of Structural Biology, Vol. 124, Issue 2-3
Monomeric C-phycocyanin at room temperature and 77 K: resolution of the absorption and fluorescence spectra of the individual chromophores and the energy-transfer rate constants
journal, September 1993
- Debreczeny, Martin P.; Sauer, Kenneth; Zhou, Jianhui
- The Journal of Physical Chemistry, Vol. 97, Issue 38
Spectral properties of single light-harvesting complexes in bacterial photosynthesis
journal, March 2010
- Saga, Yoshitaka; Shibata, Yutaka; Tamiaki, Hitoshi
- Journal of Photochemistry and Photobiology C: Photochemistry Reviews, Vol. 11, Issue 1
Carbocyanine dye orientation in red cell membrane studied by microscopic fluorescence polarization
journal, June 1979
- Axelrod, D.
- Biophysical Journal, Vol. 26, Issue 3
Single Molecule Spectroscopy on the Light-Harvesting Complex II of Higher Plants
journal, July 2001
- Tietz, Carsten; Jelezko, Fedor; Gerken, Uwe
- Biophysical Journal, Vol. 81, Issue 1
Watching conformational- and photodynamics of single fluorescent proteins in solution
journal, January 2010
- Goldsmith, Randall H.; Moerner, W. E.
- Nature Chemistry, Vol. 2, Issue 3
Photo-Induced Conformational Flexibility in Single Solution-Phase Peridinin-Chlorophyll-Proteins
journal, August 2013
- Bockenhauer, Samuel D.; Moerner, W. E.
- The Journal of Physical Chemistry A, Vol. 117, Issue 35
Phycobilisomes: Structure and Dynamics
journal, October 1982
- Glazer, A. N.
- Annual Review of Microbiology, Vol. 36, Issue 1
Single-Molecule Fluorescence Analysis in Solution
journal, July 1996
- Keller, Richard A.; Ambrose, W. Patrick; Goodwin, Peter M.
- Applied Spectroscopy, Vol. 50, Issue 7
Photocurrent of a single photosynthetic protein
journal, September 2012
- Gerster, Daniel; Reichert, Joachim; Bi, Hai
- Nature Nanotechnology, Vol. 7, Issue 10
Crystal structure analysis and refinement at 2·5 Å of hexameric C-phycocyanin from the cyanobacterium Agmenellum quadruplicatum
journal, April 1986
- Schirmer, Tilman; Huber, Robert; Schneider, Monika
- Journal of Molecular Biology, Vol. 188, Issue 4
Number and Distribution of Chromophore Types in Native Phycobiliproteins
journal, August 1970
- Dale, R. E.; Teale, F. W. J.
- Photochemistry and Photobiology, Vol. 12, Issue 2
Quantum Coherent Energy Transfer over Varying Pathways in Single Light-Harvesting Complexes
journal, June 2013
- Hildner, R.; Brinks, D.; Nieder, J. B.
- Science, Vol. 340, Issue 6139
Exciton Self Trapping in Photosynthetic Pigment–Protein Complexes Studied by Single-Molecule Spectroscopy
journal, August 2012
- Kunz, Ralf; Timpmann, Kõu; Southall, June
- The Journal of Physical Chemistry B, Vol. 116, Issue 36
Optimization of high-sensitivity fluorescence detection
journal, September 1990
- Mathies, Richard A.; Peck, Konan.; Stryer, Lubert.
- Analytical Chemistry, Vol. 62, Issue 17, p. 1786-1791
A practical guide to single-molecule FRET
journal, May 2008
- Roy, Rahul; Hohng, Sungchul; Ha, Taekjip
- Nature Methods, Vol. 5, Issue 6
Phycocyanin in physical chemical studies
journal, June 1989
- Berns, Donald S.; MacColl, Robert
- Chemical Reviews, Vol. 89, Issue 4
Photophysical Properties of Phycobiliproteins from Phycobilisomes: Fluorescence Lifetimes, Quantum Yields, and Polarization Spectra
journal, July 1978
- Grabowski, Jozef; Gantt, Elisabeth
- Photochemistry and Photobiology, Vol. 28, Issue 1
FÖRSTER TRANSFER CALCULATIONS BASED ON CRYSTAL STRUCTURE DATA FROM Agmenellum quadruplicatum C-PHYCOCYANIN
journal, September 1987
- Sauer, Kenneth; Scheer, Hugo; Sauer, Peter
- Photochemistry and Photobiology, Vol. 46, Issue 3
Controlling Light Harvesting with Light
journal, September 2016
- Gwizdala, Michal; Berera, Rudi; Kirilovsky, Diana
- Journal of the American Chemical Society, Vol. 138, Issue 36
Spectrally resolved anti-Brownian electrokinetic (ABEL) trapping of single peridinin-chlorophyll-proteins in solution
conference, June 2012
- Bockenhauer, Samuel D.; Wang, Quan; Moerner, W. E.
- SPIE Photonics Europe, SPIE Proceedings
Spectroscopic Properties of C-Phycocyanin and of Its α and β Subunits
journal, August 1973
- Glazer, Alexander N.; Fang, Suen; Brown, Douglas M.
- Journal of Biological Chemistry, Vol. 248, Issue 16
Single-Molecule Detection in Capillary Electrophoresis: Molecular Shot Noise as a Fundamental Limit to Chemical Analysis
journal, January 1996
- Chen, DaYong; Dovichi, Norman J.
- Analytical Chemistry, Vol. 68, Issue 4
Single-Molecule Fluorescence Spectroscopy of Photosynthetic Systems
journal, March 2016
- Kondo, Toru; Chen, Wei Jia; Schlau-Cohen, Gabriela S.
- Chemical Reviews, Vol. 117, Issue 2
Phycobilisomes: Light-Harvesting Pigment Complexes
journal, December 1975
- Gantt, Elisabeth
- BioScience, Vol. 25, Issue 12
Probing Single Biomolecules in Solution Using the Anti-Brownian Electrokinetic (ABEL) Trap
journal, March 2012
- Wang, Quan; Goldsmith, Randall H.; Jiang, Yan
- Accounts of Chemical Research, Vol. 45, Issue 11
Method for trapping and manipulating nanoscale objects in solution
journal, February 2005
- Cohen, Adam E.; Moerner, W. E.
- Applied Physics Letters, Vol. 86, Issue 9
Internal Conversion in the Photosynthetic Mechanism of Blue-Green Algae
journal, March 1950
- Arnold, W.
- The Journal of General Physiology, Vol. 33, Issue 4