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Title: Structure of photosystem II and substrate binding at room temperature

Authors:
 [1];  [2];  [1];  [1];  [1];  [3];  [1];  [1];  [4];  [5];  [1];  [6];  [7];  [6];  [2];  [2];  [1];  [8];  [3];  [3] more »;  [3];  [3];  [3];  [1];  [1];  [2];  [9];  [9];  [1];  [6];  [6];  [1];  [10];  [11];  [11];  [12];  [11];  [4];  [4];  [4];  [4];  [4];  [4];  [4];  [4];  [4];  [4];  [4];  [13];  [13];  [1];  [1];  [1];  [14];  [11];  [8];  [2];  [15];  [16];  [1];  [17];  [2];  [18];  [6];  [1];  [19];  [1];  [1] « less
+ Show Author Affiliations
  1. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Molecular Biophysics and Integrated Bioimaging Division
  2. Humboldt Univ. of Berlin (Germany). Institute of Biology
  3. Umea University (Sweden). Institutionen for Kemi, Kemiskt Biologiskt Centrum
  4. SLAC National Accelerator Lab., Menlo Park, CA (United States). Linac Coherent Light Source (LCLS)
  5. SLAC National Accelerator Lab., Menlo Park, CA (United States). Stanford PULSE Institute and SSRL
  6. SLAC National Accelerator Lab., Menlo Park, CA (United States). Stanford PULSE Institute
  7. SLAC National Accelerator Lab., Menlo Park, CA (United States). Linac Coherent Light Source (LCLS) and Stanford PULSE Institute
  8. Institute for Methods and Instrumentation on Synchrotron Radiation Research, Helmholtz Zentrum, Berlin (Germany)
  9. SLAC National Accelerator Lab., Menlo Park, CA (United States). Stanford Synchrotron Radiation Lightsource (SSRL)
  10. Univ. of Oxford (United Kingdom). Department of Biochemistry; Diamond Light Source Ltd, Harwell Science and Innovation Campus (United Kingdom)
  11. Diamond Light Source Ltd, Harwell Science and Innovation Campus (United Kingdom)
  12. Brookhaven National Lab. (BNL), Upton, NY (United States). National Synchrotron Light Source II (NSLS-II)
  13. Stanford Univ., CA (United States). Department of Molecular and Cellular Physiology and Howard Hughes Medical Institute
  14. STFC Rutherford Appleton Laboratory (United Kingdom). CCP4, Research Complex at Harwell
  15. Stanford Univ., CA (United States). Department of Molecular and Cellular Physiology, Department of Photon Science, and Department of Structural Biology
  16. Stanford Univ., CA (United States). Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Department of Photon Science, and Department of Structural Biology
  17. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Molecular Biophysics and Integrated Bioimaging Division; Univ. of California, Berkeley, CA (United States). Department of Bioengineering
  18. Umea University (Sweden). Institutionen for Kemi, Kemiskt Biologiskt Centrum; Ångström Laboratory, Uppsala University (Sweden). Department of Chemistry, Molecular Biomimetics
  19. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Molecular Biophysics and Integrated Bioimaging Division; SLAC National Accelerator Lab., Menlo Park, CA (United States). Linac Coherent Light Source (LCLS)
Publication Date:
Research Org.:
Brookhaven National Laboratory (BNL), Upton, NY (United States); SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
OSTI Identifier:
1376142
Alternate Identifier(s):
OSTI ID: 1361141
Report Number(s):
BNL-114083-2017-JA
Journal ID: ISSN 0028-0836
Grant/Contract Number:  
SC0012704; AC02-05CH11231; AC02-76SF00515
Resource Type:
Accepted Manuscript
Journal Name:
Nature (London)
Additional Journal Information:
Journal Name: Nature (London); Journal Volume: 540; Journal Issue: 7633; Journal ID: ISSN 0028-0836
Publisher:
Nature Publishing Group
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Young, Iris D., Ibrahim, Mohamed, Chatterjee, Ruchira, Gul, Sheraz, Fuller, Franklin D., Koroidov, Sergey, Brewster, Aaron S., Tran, Rosalie, Alonso-Mori, Roberto, Kroll, Thomas, Michels-Clark, Tara, Laksmono, Hartawan, Sierra, Raymond G., Stan, Claudiu A., Hussein, Rana, Zhang, Miao, Douthit, Lacey, Kubin, Markus, de Lichtenberg, Casper, Vo Pham, Long, Nilsson, Håkan, Cheah, Mun Hon, Shevela, Dmitriy, Saracini, Claudio, Bean, Mackenzie A., Seuffert, Ina, Sokaras, Dimosthenis, Weng, Tsu-Chien, Pastor, Ernest, Weninger, Clemens, Fransson, Thomas, Lassalle, Louise, Bräuer, Philipp, Aller, Pierre, Docker, Peter T., Andi, Babak, Orville, Allen M., Glownia, James M., Nelson, Silke, Sikorski, Marcin, Zhu, Diling, Hunter, Mark S., Lane, Thomas J., Aquila, Andy, Koglin, Jason E., Robinson, Joseph, Liang, Mengning, Boutet, Sébastien, Lyubimov, Artem Y., Uervirojnangkoorn, Monarin, Moriarty, Nigel W., Liebschner, Dorothee, Afonine, Pavel V., Waterman, David G., Evans, Gwyndaf, Wernet, Philippe, Dobbek, Holger, Weis, William I., Brunger, Axel T., Zwart, Petrus H., Adams, Paul D., Zouni, Athina, Messinger, Johannes, Bergmann, Uwe, Sauter, Nicholas K., Kern, Jan, Yachandra, Vittal K., and Yano, Junko. Structure of photosystem II and substrate binding at room temperature. United States: N. p., 2016. Web. doi:10.1038/nature20161.
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Young, Iris D., Ibrahim, Mohamed, Chatterjee, Ruchira, Gul, Sheraz, Fuller, Franklin D., Koroidov, Sergey, Brewster, Aaron S., Tran, Rosalie, Alonso-Mori, Roberto, Kroll, Thomas, Michels-Clark, Tara, Laksmono, Hartawan, Sierra, Raymond G., Stan, Claudiu A., Hussein, Rana, Zhang, Miao, Douthit, Lacey, Kubin, Markus, de Lichtenberg, Casper, Vo Pham, Long, Nilsson, Håkan, Cheah, Mun Hon, Shevela, Dmitriy, Saracini, Claudio, Bean, Mackenzie A., Seuffert, Ina, Sokaras, Dimosthenis, Weng, Tsu-Chien, Pastor, Ernest, Weninger, Clemens, Fransson, Thomas, Lassalle, Louise, Bräuer, Philipp, Aller, Pierre, Docker, Peter T., Andi, Babak, Orville, Allen M., Glownia, James M., Nelson, Silke, Sikorski, Marcin, Zhu, Diling, Hunter, Mark S., Lane, Thomas J., Aquila, Andy, Koglin, Jason E., Robinson, Joseph, Liang, Mengning, Boutet, Sébastien, Lyubimov, Artem Y., Uervirojnangkoorn, Monarin, Moriarty, Nigel W., Liebschner, Dorothee, Afonine, Pavel V., Waterman, David G., Evans, Gwyndaf, Wernet, Philippe, Dobbek, Holger, Weis, William I., Brunger, Axel T., Zwart, Petrus H., Adams, Paul D., Zouni, Athina, Messinger, Johannes, Bergmann, Uwe, Sauter, Nicholas K., Kern, Jan, Yachandra, Vittal K., & Yano, Junko. Structure of photosystem II and substrate binding at room temperature. United States. https://doi.org/10.1038/nature20161
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Young, Iris D., Ibrahim, Mohamed, Chatterjee, Ruchira, Gul, Sheraz, Fuller, Franklin D., Koroidov, Sergey, Brewster, Aaron S., Tran, Rosalie, Alonso-Mori, Roberto, Kroll, Thomas, Michels-Clark, Tara, Laksmono, Hartawan, Sierra, Raymond G., Stan, Claudiu A., Hussein, Rana, Zhang, Miao, Douthit, Lacey, Kubin, Markus, de Lichtenberg, Casper, Vo Pham, Long, Nilsson, Håkan, Cheah, Mun Hon, Shevela, Dmitriy, Saracini, Claudio, Bean, Mackenzie A., Seuffert, Ina, Sokaras, Dimosthenis, Weng, Tsu-Chien, Pastor, Ernest, Weninger, Clemens, Fransson, Thomas, Lassalle, Louise, Bräuer, Philipp, Aller, Pierre, Docker, Peter T., Andi, Babak, Orville, Allen M., Glownia, James M., Nelson, Silke, Sikorski, Marcin, Zhu, Diling, Hunter, Mark S., Lane, Thomas J., Aquila, Andy, Koglin, Jason E., Robinson, Joseph, Liang, Mengning, Boutet, Sébastien, Lyubimov, Artem Y., Uervirojnangkoorn, Monarin, Moriarty, Nigel W., Liebschner, Dorothee, Afonine, Pavel V., Waterman, David G., Evans, Gwyndaf, Wernet, Philippe, Dobbek, Holger, Weis, William I., Brunger, Axel T., Zwart, Petrus H., Adams, Paul D., Zouni, Athina, Messinger, Johannes, Bergmann, Uwe, Sauter, Nicholas K., Kern, Jan, Yachandra, Vittal K., and Yano, Junko. Mon . "Structure of photosystem II and substrate binding at room temperature". United States. https://doi.org/10.1038/nature20161. https://www.osti.gov/servlets/purl/1376142.
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@article{osti_1376142,
title = {Structure of photosystem II and substrate binding at room temperature},
author = {Young, Iris D. and Ibrahim, Mohamed and Chatterjee, Ruchira and Gul, Sheraz and Fuller, Franklin D. and Koroidov, Sergey and Brewster, Aaron S. and Tran, Rosalie and Alonso-Mori, Roberto and Kroll, Thomas and Michels-Clark, Tara and Laksmono, Hartawan and Sierra, Raymond G. and Stan, Claudiu A. and Hussein, Rana and Zhang, Miao and Douthit, Lacey and Kubin, Markus and de Lichtenberg, Casper and Vo Pham, Long and Nilsson, Håkan and Cheah, Mun Hon and Shevela, Dmitriy and Saracini, Claudio and Bean, Mackenzie A. and Seuffert, Ina and Sokaras, Dimosthenis and Weng, Tsu-Chien and Pastor, Ernest and Weninger, Clemens and Fransson, Thomas and Lassalle, Louise and Bräuer, Philipp and Aller, Pierre and Docker, Peter T. and Andi, Babak and Orville, Allen M. and Glownia, James M. and Nelson, Silke and Sikorski, Marcin and Zhu, Diling and Hunter, Mark S. and Lane, Thomas J. and Aquila, Andy and Koglin, Jason E. and Robinson, Joseph and Liang, Mengning and Boutet, Sébastien and Lyubimov, Artem Y. and Uervirojnangkoorn, Monarin and Moriarty, Nigel W. and Liebschner, Dorothee and Afonine, Pavel V. and Waterman, David G. and Evans, Gwyndaf and Wernet, Philippe and Dobbek, Holger and Weis, William I. and Brunger, Axel T. and Zwart, Petrus H. and Adams, Paul D. and Zouni, Athina and Messinger, Johannes and Bergmann, Uwe and Sauter, Nicholas K. and Kern, Jan and Yachandra, Vittal K. and Yano, Junko},
abstractNote = {},
doi = {10.1038/nature20161},
journal = {Nature (London)},
number = 7633,
volume = 540,
place = {United States},
year = {2016},
month = {11}
}
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Works referenced in this record:

Native-like Photosystem II Superstructure at 2.44 Å Resolution through Detergent Extraction from the Protein Crystal
journal, November 2014

The Coherent X-ray Imaging (CXI) instrument at the Linac Coherent Light Source (LCLS)
journal, March 2010

On-line mass spectrometry: membrane inlet sampling
journal, August 2009

  • Beckmann, Katrin; Messinger, Johannes; Badger, Murray Ronald
  • Photosynthesis Research, Vol. 102, Issue 2-3
  • DOI: 10.1007/s11120-009-9474-7

Nature of biological electron transfer
journal, February 1992

  • Moser, Christopher C.; Keske, Jonathan M.; Warncke, Kurt
  • Nature, Vol. 355, Issue 6363
  • DOI: 10.1038/355796a0

Structures and Energetics for O 2 Formation in Photosystem II
journal, December 2009

  • Siegbahn, Per E. M.
  • Accounts of Chemical Research, Vol. 42, Issue 12
  • DOI: 10.1021/ar900117k

NH 3 Binding to the S 2 State of the O 2 -Evolving Complex of Photosystem II: Analogue to H 2 O Binding during the S 2 → S 3 Transition
journal, September 2015

New Python-based methods for data processing
journal, June 2013

  • Sauter, Nicholas K.; Hattne, Johan; Grosse-Kunstleve, Ralf W.
  • Acta Crystallographica Section D Biological Crystallography, Vol. 69, Issue 7
  • DOI: 10.1107/S0907444913000863

Effects of Ammonia on the Structure of the Oxygen-Evolving Complex in Photosystem II As Revealed by Light-Induced FTIR Difference Spectroscopy
journal, November 2011

  • Hou, Li-Hsiu; Wu, Chia-Ming; Huang, Hsin-Ho
  • Biochemistry, Vol. 50, Issue 43
  • DOI: 10.1021/bi200943q

Towards automated crystallographic structure refinement with phenix.refine
journal, March 2012

  • Afonine, Pavel V.; Grosse-Kunstleve, Ralf W.; Echols, Nathaniel
  • Acta Crystallographica Section D Biological Crystallography, Vol. 68, Issue 4
  • DOI: 10.1107/S0907444912001308

Mechanism of photosynthetic water oxidation: combining biophysical studies of photosystem II with inorganic model chemistry
journal, January 2001

  • Vrettos, John S.; Limburg, Julian; Brudvig, Gary W.
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1503, Issue 1-2
  • DOI: 10.1016/S0005-2728(00)00214-0

Structural changes in the S3 state of the oxygen evolving complex in photosystem II
journal, May 2016

Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy
journal, July 2014

  • Kern, Jan; Tran, Rosalie; Alonso-Mori, Roberto
  • Nature Communications, Vol. 5, Issue 1
  • DOI: 10.1038/ncomms5371

Redox-coupled substrate water reorganization in the active site of Photosystem II—The role of calcium in substrate water delivery
journal, June 2016

  • Ugur, Ilke; Rutherford, A. William; Kaila, Ville R. I.
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1857, Issue 6
  • DOI: 10.1016/j.bbabio.2016.01.015

Reflections on substrate water and dioxygen formation
journal, August 2013

  • Cox, Nicholas; Messinger, Johannes
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1827, Issue 8-9
  • DOI: 10.1016/j.bbabio.2013.01.013

Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å
journal, April 2011

  • Umena, Yasufumi; Kawakami, Keisuke; Shen, Jian-Ren
  • Nature, Vol. 473, Issue 7345
  • DOI: 10.1038/nature09913

Improved statistics for determining the Patterson symmetry from unmerged diffraction intensities
journal, March 2006

  • Sauter, Nicholas K.; Grosse-Kunstleve, Ralf W.; Adams, Paul D.
  • Journal of Applied Crystallography, Vol. 39, Issue 2
  • DOI: 10.1107/S0021889805042299

Ammonia binds to the manganese site of the oxygen-evolving complex of photosystem II in the S2 state
journal, July 1986

  • Beck, Warren F.; De Paula, Julio C.; Brudvig, Gary W.
  • Journal of the American Chemical Society, Vol. 108, Issue 14
  • DOI: 10.1021/ja00274a027

Improved crystal orientation and physical properties from single-shot XFEL stills
journal, November 2014

  • Sauter, Nicholas K.; Hattne, Johan; Brewster, Aaron S.
  • Acta Crystallographica Section D Biological Crystallography, Vol. 70, Issue 12
  • DOI: 10.1107/S1399004714024134

A five-coordinate Mn( iv ) intermediate in biological water oxidation: spectroscopic signature and a pivot mechanism for water binding
journal, January 2016

  • Retegan, Marius; Krewald, Vera; Mamedov, Fikret
  • Chemical Science, Vol. 7, Issue 1
  • DOI: 10.1039/C5SC03124A

The Coherent X-ray Imaging instrument at the Linac Coherent Light Source
journal, April 2015

  • Liang, Mengning; Williams, Garth J.; Messerschmidt, Marc
  • Journal of Synchrotron Radiation, Vol. 22, Issue 3
  • DOI: 10.1107/S160057751500449X

Simultaneous Femtosecond X-ray Spectroscopy and Diffraction of Photosystem II at Room Temperature
journal, February 2013

Automated diffraction image analysis and spot searching for high-throughput crystal screening
journal, January 2006

  • Zhang, Zepu; Sauter, Nicholas K.; van den Bedem, Henry
  • Journal of Applied Crystallography, Vol. 39, Issue 1
  • DOI: 10.1107/S0021889805040677

Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser
journal, July 2014

  • Kupitz, Christopher; Basu, Shibom; Grotjohann, Ingo
  • Nature, Vol. 513, Issue 7517
  • DOI: 10.1038/nature13453

No observable conformational changes in PSII
journal, May 2016

  • Sauter, Nicholas K.; Echols, Nathaniel; Adams, Paul D.
  • Nature, Vol. 533, Issue 7603
  • DOI: 10.1038/nature17983

Structural Changes of the Oxygen-evolving Complex in Photosystem II during the Catalytic Cycle
journal, June 2013

  • Glöckner, Carina; Kern, Jan; Broser, Matthias
  • Journal of Biological Chemistry, Vol. 288, Issue 31
  • DOI: 10.1074/jbc.M113.476622

18O-Water exchange in photosystem II: Substrate binding and intermediates of the water splitting cycle
journal, February 2008

FEM: feature-enhanced map
journal, February 2015

  • Afonine, Pavel V.; Moriarty, Nigel W.; Mustyakimov, Marat
  • Acta Crystallographica Section D Biological Crystallography, Vol. 71, Issue 3
  • DOI: 10.1107/S1399004714028132

Zwischenmolekulare Energiewanderung und Fluoreszenz
journal, January 1948

A statistic for local intensity differences: robustness to anisotropy and pseudo-centering and utility for detecting twinning
journal, June 2003

  • Padilla, Jennifer E.; Yeates, Todd O.
  • Acta Crystallographica Section D Biological Crystallography, Vol. 59, Issue 7
  • DOI: 10.1107/S0907444903007947

Robust indexing for automatic data collection
journal, May 2004

  • Sauter, Nicholas K.; Grosse-Kunstleve, Ralf W.; Adams, Paul D.
  • Journal of Applied Crystallography, Vol. 37, Issue 3
  • DOI: 10.1107/S0021889804005874

Interaction of ammonia with the water splitting enzyme of photosystem II
journal, January 1990

  • Boussac, Alain; Rutherford, A. William; Styring, Stenbjorn
  • Biochemistry, Vol. 29, Issue 1
  • DOI: 10.1021/bi00453a003

Ammonia Binds to the Dangler Manganese of the Photosystem II Oxygen-Evolving Complex
journal, July 2015

  • Oyala, Paul H.; Stich, Troy A.; Debus, Richard J.
  • Journal of the American Chemical Society, Vol. 137, Issue 27
  • DOI: 10.1021/jacs.5b04768

Accurate macromolecular structures using minimal measurements from X-ray free-electron lasers
journal, March 2014

  • Hattne, Johan; Echols, Nathaniel; Tran, Rosalie
  • Nature Methods, Vol. 11, Issue 5
  • DOI: 10.1038/nmeth.2887

Diffraction-geometry refinement in the DIALS framework
journal, March 2016

  • Waterman, David G.; Winter, Graeme; Gildea, Richard J.
  • Acta Crystallographica Section D Structural Biology, Vol. 72, Issue 4
  • DOI: 10.1107/S2059798316002187

Biological Water Oxidation
journal, March 2013

  • Cox, Nicholas; Pantazis, Dimitrios A.; Neese, Frank
  • Accounts of Chemical Research, Vol. 46, Issue 7
  • DOI: 10.1021/ar3003249

Purification, characterisation and crystallisation of photosystem II from Thermosynechococcus elongatus cultivated in a new type of photobioreactor
journal, January 2005

  • Kern, J.; Loll, B.; Lüneberg, C.
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1706, Issue 1-2
  • DOI: 10.1016/j.bbabio.2004.10.007

Alternative mechanisms for O 2 release and O–O bond formation in the oxygen evolving complex of photosystem II
journal, January 2015

  • Li, Xichen; Siegbahn, Per E. M.
  • Physical Chemistry Chemical Physics, Vol. 17, Issue 18
  • DOI: 10.1039/C5CP00138B

Mn 4 Ca Cluster in Photosynthesis: Where and How Water is Oxidized to Dioxygen
journal, March 2014

  • Yano, Junko; Yachandra, Vittal
  • Chemical Reviews, Vol. 114, Issue 8
  • DOI: 10.1021/cr4004874

Native structure of photosystem II at 1.95 Å resolution viewed by femtosecond X-ray pulses
journal, November 2014

  • Suga, Michihiro; Akita, Fusamichi; Hirata, Kunio
  • Nature, Vol. 517, Issue 7532
  • DOI: 10.1038/nature13991

An Algorithm for Automatic Indexing of Oscillation Images using Fourier Analysis
journal, December 1997

  • Steller, I.; Bolotovsky, R.; Rossmann, M. G.
  • Journal of Applied Crystallography, Vol. 30, Issue 6
  • DOI: 10.1107/S0021889897008777

Data processing
journal, October 1999

  • Rossmann, Michael G.; van Beek, Cornelis G.
  • Acta Crystallographica Section D Biological Crystallography, Vol. 55, Issue 10
  • DOI: 10.1107/S0907444999008379

Simulation of the isotropic EXAFS spectra for the S 2 and S 3 structures of the oxygen evolving complex in photosystem II
journal, March 2015

  • Li, Xichen; Siegbahn, Per E. M.; Ryde, Ulf
  • Proceedings of the National Academy of Sciences, Vol. 112, Issue 13
  • DOI: 10.1073/pnas.1422058112

A proposal for water oxidation in photosystem II
journal, January 1998

  • Pecoraro, V. L.; Baldwin, M. J.; Caudle, M. T.
  • Pure and Applied Chemistry, Vol. 70, Issue 4
  • DOI: 10.1351/pac199870040925

PHENIX: a comprehensive Python-based system for macromolecular structure solution
journal, January 2010

  • Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
  • Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221
  • DOI: 10.1107/S0907444909052925

Electrochemically produced hydrogen peroxide affects Joliot-type oxygen-evolution measurements of photosystem II
journal, September 2014

  • Pham, Long Vo; Messinger, Johannes
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1837, Issue 9
  • DOI: 10.1016/j.bbabio.2014.01.013

XFEL diffraction: developing processing methods to optimize data quality
journal, January 2015

Electronic structure of the oxygen-evolving complex in photosystem II prior to O-O bond formation
journal, August 2014

COOPERATION OF CHARGES IN PHOTOSYNTHETIC O 2 EVOLUTION–I. A LINEAR FOUR STEP MECHANISM
journal, June 1970

Improvements in serial femtosecond crystallography of photosystem II by optimizing crystal uniformity using microseeding procedures
journal, July 2015

  • Ibrahim, Mohamed; Chatterjee, Ruchira; Hellmich, Julia
  • Structural Dynamics, Vol. 2, Issue 4
  • DOI: 10.1063/1.4919741

Ammonia binding to the oxygen-evolving complex of photosystem II identifies the solvent-exchangeable oxygen bridge ( -oxo) of the manganese tetramer
journal, September 2013

  • Perez Navarro, M.; Ames, W. M.; Nilsson, H.
  • Proceedings of the National Academy of Sciences, Vol. 110, Issue 39
  • DOI: 10.1073/pnas.1304334110

Detection of one slowly exchanging substrate water molecule in the S3 state of photosystem II.
journal, April 1995

  • Messinger, J.; Badger, M.; Wydrzynski, T.
  • Proceedings of the National Academy of Sciences, Vol. 92, Issue 8
  • DOI: 10.1073/pnas.92.8.3209

Binding of amines to the oxygen-evolving center of photosystem II
journal, October 1986

Accessing protein conformational ensembles using room-temperature X-ray crystallography
journal, September 2011

  • Fraser, J. S.; van den Bedem, H.; Samelson, A. J.
  • Proceedings of the National Academy of Sciences, Vol. 108, Issue 39
  • DOI: 10.1073/pnas.1111325108

Ammonia binds to the catalytic manganese of the oxygen-evolving complex of photosystem II. Evidence by electron spin-echo envelope modulation spectroscopy
journal, May 1989

  • Britt, R. David; Zimmermann, Jean Luc; Sauer, Kenneth
  • Journal of the American Chemical Society, Vol. 111, Issue 10
  • DOI: 10.1021/ja00192a006

Phaser crystallographic software
journal, July 2007

  • McCoy, Airlie J.; Grosse-Kunstleve, Ralf W.; Adams, Paul D.
  • Journal of Applied Crystallography, Vol. 40, Issue 4
  • DOI: 10.1107/S0021889807021206

Nanoflow electrospinning serial femtosecond crystallography
journal, October 2012

  • Sierra, Raymond G.; Laksmono, Hartawan; Kern, Jan
  • Acta Crystallographica Section D Biological Crystallography, Vol. 68, Issue 11, p. 1584-1587
  • DOI: 10.1107/S0907444912038152

The New Macromolecular Femtosecond Crystallography (MFX) Instrument at LCLS
journal, January 2016

Concentric-flow electrokinetic injector enables serial crystallography of ribosome and photosystem II
journal, November 2015

  • Sierra, Raymond G.; Gati, Cornelius; Laksmono, Hartawan
  • Nature Methods, Vol. 13, Issue 1
  • DOI: 10.1038/nmeth.3667

PARP1 exhibits enhanced association and catalytic efficiency with γH2A.X-nucleosome
journal, December 2019

Cavin1 intrinsically disordered domains are essential for fuzzy electrostatic interactions and caveola formation
journal, February 2021

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
text, January 2010

  • Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
  • Apollo - University of Cambridge Repository
  • DOI: 10.17863/cam.45787
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    • Angewandte Chemie International Edition, Vol. 58, Issue 25
    • DOI: 10.1002/anie.201903738

    Rationalizing the 2.25 Å Resolution Crystal Structure of the Water Oxidising Complex of Photosystem II in the S 3 State
    journal, August 2017

    Across the Board: Licheng Sun on the Mechanism of O−O Bond Formation in Photosystem II
    journal, June 2019

    Local Structural Modification of Ca2+-Depleted Photosystem II Detected by Proton Matrix ENDOR
    journal, April 2018

    Unequal misses during the flash-induced advancement of photosystem II: effects of the S state and acceptor side cycles
    journal, September 2018

    • Pham, Long Vo; Janna Olmos, Julian David; Chernev, Petko
    • Photosynthesis Research, Vol. 139, Issue 1-3
    • DOI: 10.1007/s11120-018-0574-0

    Effect of sucrose-bound polynuclear iron oxyhydroxide nanoparticles on the efficiency of electron transport in the photosystem II membranes
    journal, May 2019

    International conference on “Photosynthesis and Hydrogen Energy Research for Sustainability-2019”: in honor of Tingyun Kuang, Anthony Larkum, Cesare Marchetti, and Kimiyuki Satoh
    journal, November 2019

    • Borisova-Mubarakshina, Maria M.; Tsygankov, Anatoly A.; Tomo, Tatsuya
    • Photosynthesis Research, Vol. 146, Issue 1-3
    • DOI: 10.1007/s11120-019-00687-w

    Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL
    journal, February 2017

    • Suga, Michihiro; Akita, Fusamichi; Sugahara, Michihiro
    • Nature, Vol. 543, Issue 7643
    • DOI: 10.1038/nature21400

    Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
    journal, October 2017

    Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy
    journal, February 2020

    • Woodhouse, Joyce; Nass Kovacs, Gabriela; Coquelle, Nicolas
    • Nature Communications, Vol. 11, Issue 1
    • DOI: 10.1038/s41467-020-14537-0

    The development of molecular water oxidation catalysts
    journal, April 2019

    • Matheu, Roc; Garrido-Barros, Pablo; Gil-Sepulcre, Marcos
    • Nature Reviews Chemistry, Vol. 3, Issue 5
    • DOI: 10.1038/s41570-019-0096-0

    Structures of the intermediates of Kok’s photosynthetic water oxidation clock
    journal, November 2018

    What Mn K β spectroscopy reveals concerning the oxidation states of the Mn cluster in photosystem II
    journal, January 2017

    • Petrie, Simon; Stranger, Rob; Pace, Ron J.
    • Phys. Chem. Chem. Phys., Vol. 19, Issue 40
    • DOI: 10.1039/c7cp04797e

    On the photocatalytic cycle of water splitting with small manganese oxides and the roles of water clusters as direct sources of oxygen molecules
    journal, January 2018

    • Yamamoto, Kentaro; Takatsuka, Kazuo
    • Physical Chemistry Chemical Physics, Vol. 20, Issue 9
    • DOI: 10.1039/c7cp07171j

    How to make an efficient and robust molecular catalyst for water oxidation
    journal, January 2017

    • Garrido-Barros, Pablo; Gimbert-Suriñach, Carolina; Matheu, Roc
    • Chemical Society Reviews, Vol. 46, Issue 20
    • DOI: 10.1039/c7cs00248c

    Water oxidation by a manganese–potassium cluster: Mn oxide as a kinetically dominant “true” catalyst for water oxidation
    journal, January 2018

    • Mousazade, Younes; Mohammadi, Mohammad Reza; Chernev, Petko
    • Catalysis Science & Technology, Vol. 8, Issue 17
    • DOI: 10.1039/c8cy01151f

    Efficient hydrogen production using photosystem I enhanced by artificial light harvesting dye
    journal, January 2019

    • Nagakawa, Haruki; Takeuchi, Ayano; Takekuma, Yuya
    • Photochemical & Photobiological Sciences, Vol. 18, Issue 2
    • DOI: 10.1039/c8pp00426a

    Significance of hydrogen bonding networks in the proton-coupled electron transfer reactions of photosystem II from a quantum-mechanics perspective
    journal, January 2019

    • Chai, Jun; Zheng, Zhaoyang; Pan, Hui
    • Physical Chemistry Chemical Physics, Vol. 21, Issue 17
    • DOI: 10.1039/c9cp00868c

    Inner-shell X-ray absorption spectra of the cationic series NH y + ( y = 0–3)
    journal, January 2019

    • Bari, Sadia; Inhester, Ludger; Schubert, Kaja
    • Physical Chemistry Chemical Physics, Vol. 21, Issue 30
    • DOI: 10.1039/c9cp02864a

    Co-existence of ferro- and antiferromagnetic interactions in a hexanuclear mixed-valence CoIII2MnII2MnIV2 cluster sustained by a multidentate Schiff base ligand
    journal, January 2019

    • Stetsiuk, Oleh; Synytsia, Valentyn; Petrusenko, Svitlana R.
    • Dalton Transactions, Vol. 48, Issue 31
    • DOI: 10.1039/c9dt02503k

    Artificial photosynthesis – concluding remarks
    journal, January 2019

    Pentanuclear iron catalysts for water oxidation: substituents provide two routes to control onset potentials
    journal, January 2019

    • Praneeth, Vijayendran K. K.; Kondo, Mio; Okamura, Masaya
    • Chemical Science, Vol. 10, Issue 17
    • DOI: 10.1039/c9sc00678h

    A synthetic manganese–calcium cluster similar to the catalyst of Photosystem II: challenges for biomimetic water oxidation
    journal, January 2020

    • Mousazade, Younes; Mohammadi, Mohammad Reza; Bagheri, Robabeh
    • Dalton Transactions
    • DOI: 10.1039/d0dt00536c

    Perspective: Opportunities for ultrafast science at SwissFEL
    journal, November 2017

    • Abela, Rafael; Beaud, Paul; van Bokhoven, Jeroen A.
    • Structural Dynamics, Vol. 4, Issue 6
    • DOI: 10.1063/1.4997222

    D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine Y Z for proton exit during water oxidation
    journal, October 2017

    • Nagao, Ryo; Ueoka-Nakanishi, Hanayo; Noguchi, Takumi
    • Journal of Biological Chemistry, Vol. 292, Issue 49
    • DOI: 10.1074/jbc.m117.815183

    Theory of chemical bonds in metalloenzymes XXI. Possible mechanisms of water oxidation in oxygen evolving complex of photosystem II
    journal, December 2017

    The Macromolecular Femtosecond Crystallography Instrument at the Linac Coherent Light Source
    journal, February 2019

    • Sierra, Raymond G.; Batyuk, Alexander; Sun, Zhibin
    • Journal of Synchrotron Radiation, Vol. 26, Issue 2
    • DOI: 10.1107/s1600577519001577

    Structure-factor amplitude reconstruction from serial femtosecond crystallography of two-dimensional membrane-protein crystals
    journal, January 2019

    Radiation damage in protein crystallography at X-ray free-electron lasers
    journal, January 2019

    Why we need to know the structure of phosphorylated chloroplast light-harvesting complex II
    journal, May 2017

    ‘Birth defects’ of photosystem II make it highly susceptible to photodamage during chloroplast biogenesis
    journal, February 2019

    • Shevela, Dmitry; Ananyev, Gennady; Vatland, Ann K.
    • Physiologia Plantarum, Vol. 166, Issue 1
    • DOI: 10.1111/ppl.12932

    Dynamic pH‐induced conformational changes of the PsbO protein in the fluctuating acidity of the thylakoid lumen
    journal, March 2019

    • Carius, Anke B.; Rogne, Per; Duchoslav, Miloš
    • Physiologia Plantarum, Vol. 166, Issue 1
    • DOI: 10.1111/ppl.12948

    Reactive oxygen species leave a damage trail that reveals water channels in Photosystem II
    journal, November 2017

    • Weisz, Daniel A.; Gross, Michael L.; Pakrasi, Himadri B.
    • Science Advances, Vol. 3, Issue 11
    • DOI: 10.1126/sciadv.aao3013

    Short-wavelength free-electron laser sources and science: a review
    text, January 2017

    • Seddon, E. A.; Clarke, J. A.; Dunning, D. J.
    • Deutsches Elektronen-Synchrotron, DESY, Hamburg
    • DOI: 10.3204/pubdb-2018-00596

    Recent Advances in Ultrafast Structural Techniques
    journal, April 2019

    Advances in X-ray free electron laser (XFEL) diffraction data processing applied to the crystal structure of the synaptotagmin-1 / SNARE complex
    journal, October 2016

    • Lyubimov, Artem Y.; Uervirojnangkoorn, Monarin; Zeldin, Oliver B.
    • eLife, Vol. 5
    • DOI: 10.7554/elife.18740

    Evolution from S 3 to S 4 States of the Oxygen-Evolving Complex in Photosystem II Monitored by Quantum Mechanics/Molecular Mechanics (QM/MM) Dynamics
    journal, June 2018

    • Narzi, Daniele; Capone, Matteo; Bovi, Daniele
    • Chemistry - A European Journal, Vol. 24, Issue 42
    • DOI: 10.1002/chem.201801709

    The Two Alternative Oxidation State Assignments of Manganese Ions: What S2 CW-EPR Multiline (ML) Signal Simulations Reveal?
    journal, February 2020

    Water oxidation in photosystem II
    journal, June 2019

    Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers
    journal, February 2017

    • Fuller, Franklin D.; Gul, Sheraz; Chatterjee, Ruchira
    • Nature Methods, Vol. 14, Issue 4
    • DOI: 10.1038/nmeth.4195

    Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate
    journal, November 2017

    • Tosha, Takehiko; Nomura, Takashi; Nishida, Takuma
    • Nature Communications, Vol. 8, Article No. 1585
    • DOI: 10.1038/s41467-017-01702-1

    Hydrophilicity and oxophilicity of the isolated CaMn 4 O 5 cationic cluster modeling inorganic core of the oxygen-evolving complex
    journal, January 2019

    • Zhang, Yufei; Masuzaki, Daigo; Mafuné, Fumitaka
    • Chemical Communications, Vol. 55, Issue 95
    • DOI: 10.1039/c9cc07818e

    Microfluidics: From crystallization to serial time-resolved crystallography
    journal, May 2017

    • Sui, Shuo; Perry, Sarah L.
    • Structural Dynamics, Vol. 4, Issue 3
    • DOI: 10.1063/1.4979640

    A novel chlorophyll protein complex in the repair cycle of photosystem II
    journal, October 2019

    • Weisz, Daniel A.; Johnson, Virginia M.; Niedzwiedzki, Dariusz M.
    • Proceedings of the National Academy of Sciences, Vol. 116, Issue 43
    • DOI: 10.1073/pnas.1909644116

    XFELs for structure and dynamics in biology
    journal, May 2017

    Using sound pulses to solve the crystal-harvesting bottleneck
    journal, October 2018

    • Samara, Yasmin N.; Brennan, Haley M.; McCarthy, Liam
    • Acta Crystallographica Section D Structural Biology, Vol. 74, Issue 10
    • DOI: 10.1107/s2059798318011506

    Perspective: Opportunities for ultrafast science at SwissFEL
    text, January 2017

    Calcium, conformational selection, and redox-active tyrosine YZ in the photosynthetic oxygen-evolving cluster
    journal, May 2018

    • Guo, Zhanjun; He, Jiayuan; Barry, Bridgette A.
    • Proceedings of the National Academy of Sciences, Vol. 115, Issue 22
    • DOI: 10.1073/pnas.1800758115

    Structure-factor amplitude reconstruction from serial femtosecond crystallography of two-dimensional membrane-protein crystals
    text, January 2019

    • Casadei, Cecilia M.; Nass, Karol; Barty, Anton
    • Deutsches Elektronen-Synchrotron, DESY, Hamburg
    • DOI: 10.3204/pubdb-2018-04823

    A convolutional neural network-based screening tool for X-ray serial crystallography
    journal, April 2018

    • Ke, Tsung-Wei; Brewster, Aaron S.; Yu, Stella X.
    • Journal of Synchrotron Radiation, Vol. 25, Issue 3, p. 655-670
    • DOI: 10.1107/s1600577518004873

    Radiation damage in protein crystallography at X-ray free-electron lasers
    journal, December 2017

    • Nass, Karol Jan
    • Acta Crystallographica Section A Foundations and Advances, Vol. 73, Issue a2
    • DOI: 10.1107/s2053273317085497

    Structural isomers of the S 2 state in photosystem II: do they exist at room temperature and are they important for function?
    journal, March 2019

    • Chatterjee, Ruchira; Lassalle, Louise; Gul, Sheraz
    • Physiologia Plantarum, Vol. 166, Issue 1
    • DOI: 10.1111/ppl.12947

    Perspective: Opportunities for ultrafast science at SwissFEL
    text, January 2017

    Unequal misses during the flash-induced advancement of photosystem II: effects of the S state and acceptor side cycles
    journal, September 2018

    • Pham, Long Vo; Janna Olmos, Julian David; Chernev, Petko
    • Photosynthesis Research, Vol. 139, Issue 1-3
    • DOI: 10.1007/s11120-018-0574-0

    Manganese(II) complexes with Bn-tpen as powerful catalysts of cyclohexene oxidation
    journal, May 2017

    • Rydel-Ciszek, Katarzyna; Charczuk, Maria; Pacześniak, Tomasz
    • Chemical Papers, Vol. 71, Issue 11
    • DOI: 10.1007/s11696-017-0201-0

    Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
    journal, October 2017

    Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate
    journal, November 2017

    • Tosha, Takehiko; Nomura, Takashi; Nishida, Takuma
    • Nature Communications, Vol. 8, Article No. 1585
    • DOI: 10.1038/s41467-017-01702-1

    Temperature dependence of protein-water interactions in a gated yeast aquaporin
    journal, June 2017

    Reactive oxygen species leave a damage trail that reveals water channels in Photosystem II
    journal, November 2017

    • Weisz, Daniel A.; Gross, Michael L.; Pakrasi, Himadri B.
    • Science Advances, Vol. 3, Issue 11
    • DOI: 10.1126/sciadv.aao3013

    Enzyme intermediates captured “on the fly” by mix-and-inject serial crystallography
    journal, May 2018

    Time-Resolved Macromolecular Crystallography at Pulsed X-ray Sources
    journal, March 2019

    • Schmidt, Marius
    • International Journal of Molecular Sciences, Vol. 20, Issue 6
    • DOI: 10.3390/ijms20061401

    Perspective: Opportunities for ultrafast science at SwissFEL
    text, January 2017

    A tool for visualizing protein motions in time-resolved crystallography
    text, January 2020

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