RNAi pathways in Mucor : A tale of proteins, small RNAs and functional diversity
- Authors:
- Publication Date:
- Sponsoring Org.:
- USDOE
- OSTI Identifier:
- 1373448
- Grant/Contract Number:
- ACO2-05CH11231
- Resource Type:
- Publisher's Accepted Manuscript
- Journal Name:
- Fungal Genetics and Biology
- Additional Journal Information:
- Journal Name: Fungal Genetics and Biology Journal Volume: 90 Journal Issue: C; Journal ID: ISSN 1087-1845
- Publisher:
- Elsevier
- Country of Publication:
- United States
- Language:
- English
Citation Formats
Torres-Martínez, Santiago, and Ruiz-Vázquez, Rosa M. RNAi pathways in Mucor : A tale of proteins, small RNAs and functional diversity. United States: N. p., 2015.
Web. doi:10.1016/j.fgb.2015.11.006.
Torres-Martínez, Santiago, & Ruiz-Vázquez, Rosa M. RNAi pathways in Mucor : A tale of proteins, small RNAs and functional diversity. United States. https://doi.org/10.1016/j.fgb.2015.11.006
Torres-Martínez, Santiago, and Ruiz-Vázquez, Rosa M. Sat .
"RNAi pathways in Mucor : A tale of proteins, small RNAs and functional diversity". United States. https://doi.org/10.1016/j.fgb.2015.11.006.
@article{osti_1373448,
title = {RNAi pathways in Mucor : A tale of proteins, small RNAs and functional diversity},
author = {Torres-Martínez, Santiago and Ruiz-Vázquez, Rosa M.},
abstractNote = {},
doi = {10.1016/j.fgb.2015.11.006},
journal = {Fungal Genetics and Biology},
number = C,
volume = 90,
place = {United States},
year = {Sat Nov 21 00:00:00 EST 2015},
month = {Sat Nov 21 00:00:00 EST 2015}
}
Free Publicly Available Full Text
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https://doi.org/10.1016/j.fgb.2015.11.006
https://doi.org/10.1016/j.fgb.2015.11.006
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Cited by: 28 works
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Works referenced in this record:
Ribonuclease revisited: structural insights into ribonuclease III family enzymes
journal, February 2007
- MacRae, Ian J.; Doudna, Jennifer A.
- Current Opinion in Structural Biology, Vol. 17, Issue 1
Differentiation-Dependent Expression of 17β-Hydroxysteroid Dehydrogenase, Type 10, in the Rodent Testis: Effect of Aging in Leydig Cells
journal, July 2003
- Ivell, Richard; Balvers, Marga; Anand, Ravinder J. K.
- Endocrinology, Vol. 144, Issue 7
Calcineurin Plays Key Roles in the Dimorphic Transition and Virulence of the Human Pathogenic Zygomycete Mucor circinelloides
journal, September 2013
- Lee, Soo Chan; Li, Alicia; Calo, Silvia
- PLoS Pathogens, Vol. 9, Issue 9
Two classes of small antisense RNAs in fungal RNA silencing triggered by non-integrative transgenes
journal, August 2003
- Nicolas, F. E.
- The EMBO Journal, Vol. 22, Issue 15
Reproduction without sex: conidiation in the filamentous fungus Trichoderma
journal, October 2010
- Steyaert, Johanna M.; Weld, Richard J.; Mendoza-Mendoza, Artemio
- Microbiology, Vol. 156, Issue 10
On the origin and functions of RNA-mediated silencing: from protists to man
journal, May 2006
- Cerutti, Heriberto; Casas-Mollano, J. Armando
- Current Genetics, Vol. 50, Issue 2
QIP, a Protein That Converts Duplex siRNA Into Single Strands, Is Required for Meiotic Silencing by Unpaired DNA
journal, September 2010
- Xiao, Hua; Alexander, William G.; Hammond, Thomas M.
- Genetics, Vol. 186, Issue 1
One Juliet and four Romeos: VeA and its methyltransferases
journal, January 2015
- Sarikaya-Bayram, Özlem; Palmer, Jonathan M.; Keller, Nancy
- Frontiers in Microbiology, Vol. 6
SAD-3, a Putative Helicase Required for Meiotic Silencing by Unpaired DNA, Interacts with Other Components of the Silencing Machinery
journal, October 2011
- Hammond, Thomas M.; Xiao, Hua; Boone, Erin C.
- G3 Genes|Genomes|Genetics, Vol. 1, Issue 5
The RNAi machinery regulates growth and development in the filamentous fungus Trichoderma atroviride: Function of sRNAs in Trichoderma
journal, June 2013
- Carreras-Villaseñor, Nohemi; Esquivel-Naranjo, Edgardo U.; Villalobos-Escobedo, J. Manuel
- Molecular Microbiology, Vol. 89, Issue 1
RNA Interference Pathways in Fungi: Mechanisms and Functions
journal, October 2012
- Chang, Shwu-Shin; Zhang, Zhenyu; Liu, Yi
- Annual Review of Microbiology, Vol. 66, Issue 1
Genetic control of asexual sporulation in filamentous fungi
journal, December 2012
- Park, Hee-Soo; Yu, Jae-Hyuk
- Current Opinion in Microbiology, Vol. 15, Issue 6
Evolution of the RNA-dependent RNA polymerase (RdRP) genes: Duplications and possible losses before and after the divergence of major eukaryotic groups
journal, November 2009
- Zong, Jie; Yao, Xuan; Yin, Jinyuan
- Gene, Vol. 447, Issue 1
Calcineurin orchestrates dimorphic transitions, antifungal drug responses and host-pathogen interactions of the pathogenic mucoralean fungusMucor circinelloides
journal, June 2015
- Lee, Soo Chan; Li, Alicia; Calo, Silvia
- Molecular Microbiology, Vol. 97, Issue 5
Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
journal, February 1998
- Fire, Andrew; Xu, SiQun; Montgomery, Mary K.
- Nature, Vol. 391, Issue 6669
Cell Integrity Signaling and Response to Stress in Fission Yeast
journal, December 2010
- Perez, Pilar; Cansado, Jose
- Current Protein & Peptide Science, Vol. 11, Issue 8
The Schizosaccharomyces pombe mam1 gene encodes an ABC transporter mediating secretion of M-factor
journal, June 1997
- Christensen, P. U.; Davey, J.; Nielsen, O.
- Molecular and General Genetics MGG, Vol. 255, Issue 2
Necrotizing Cutaneous Mucormycosis after a Tornado in Joplin, Missouri, in 2011
journal, December 2012
- Neblett Fanfair, Robyn; Benedict, Kaitlin; Bos, John
- New England Journal of Medicine, Vol. 367, Issue 23
The RNAi machinery controls distinct responses to environmental signals in the basal fungus Mucor circinelloides
journal, March 2015
- Nicolás, Francisco E.; Vila, Ana; Moxon, Simon
- BMC Genomics, Vol. 16, Issue 1
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
journal, June 2011
- Goodwin, Stephen B.; Ben M'Barek, Sarrah; Dhillon, Braham
- PLoS Genetics, Vol. 7, Issue 6
Novel Perspectives on Mucormycosis: Pathophysiology, Presentation, and Management
journal, July 2005
- Spellberg, Brad; Edwards, John; Ibrahim, Ashraf
- Clinical Microbiology Reviews, Vol. 18, Issue 3
Small silencing RNAs: an expanding universe
journal, February 2009
- Ghildiyal, Megha; Zamore, Phillip D.
- Nature Reviews Genetics, Vol. 10, Issue 2
Zygomycosis: the re-emerging fungal infection
journal, March 2006
- Chayakulkeeree, M.; Ghannoum, M. A.; Perfect, J. R.
- European Journal of Clinical Microbiology & Infectious Diseases, Vol. 25, Issue 4
Sporangiospore Size Dimorphism Is Linked to Virulence of Mucor circinelloides
journal, June 2011
- Li, Charles H.; Cervantes, Maria; Springer, Deborah J.
- PLoS Pathogens, Vol. 7, Issue 6
Identification of microRNA-like RNAs in a plant pathogenic fungus Sclerotinia sclerotiorum by high-throughput sequencing
journal, February 2012
- Zhou, Jiahong; Fu, Yanping; Xie, Jiatao
- Molecular Genetics and Genomics, Vol. 287, Issue 4
Quelling: transient inactivation of gene expression in Neurospora crassa by transformation with homologous sequences
journal, November 1992
- Romano, Nicoletta; Macino, Giuseppe
- Molecular Microbiology, Vol. 6, Issue 22
Antifungal drug resistance evoked via RNAi-dependent epimutations
journal, July 2014
- Calo, Silvia; Shertz-Wall, Cecelia; Lee, Soo Chan
- Nature, Vol. 513, Issue 7519
Hairpin RNA induces secondary small interfering RNA synthesis and silencing in
trans
in fission yeast
journal, January 2010
- Simmer, Femke; Buscaino, Alessia; Kos‐Braun, Isabelle C.
- EMBO reports, Vol. 11, Issue 2
Fungal catalases: Function, phylogenetic origin and structure
journal, September 2012
- Hansberg, Wilhelm; Salas-Lizana, Rodolfo; Domínguez, Laura
- Archives of Biochemistry and Biophysics, Vol. 525, Issue 2
Carotene derivatives in sexual communication of zygomycete fungi
journal, October 2009
- Schimek, Christine; Wöstemeyer, Johannes
- Phytochemistry, Vol. 70, Issue 15-16
RNA Interference in Fungi: Pathways, Functions, and Applications
journal, July 2011
- Dang, Yunkun; Yang, Qiuying; Xue, Zhihong
- Eukaryotic Cell, Vol. 10, Issue 9
The MpkB MAP kinase plays a role in autolysis and conidiation of Aspergillus nidulans
journal, December 2013
- Kang, Ji Young; Chun, Jeesun; Jun, Sang-Cheol
- Fungal Genetics and Biology, Vol. 61
The piRNA pathway: a fly's perspective on the guardian of the genome
journal, December 2010
- Senti, Kirsten-André; Brennecke, Julius
- Trends in Genetics, Vol. 26, Issue 12
The novel globin protein fungoglobin is involved in low oxygen adaptation ofAspergillus fumigatus
journal, July 2014
- Hillmann, Falk; Linde, Jörg; Beckmann, Nicola
- Molecular Microbiology, Vol. 93, Issue 3
Small RNA sorting: matchmaking for Argonautes
journal, November 2010
- Czech, Benjamin; Hannon, Gregory J.
- Nature Reviews Genetics, Vol. 12, Issue 1
Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase
journal, May 1999
- Cogoni, Carlo; Macino, Giuseppe
- Nature, Vol. 399, Issue 6732
Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
journal, April 2010
- Nicolas, Francisco Esteban; Moxon, Simon; de Haro, Juan P.
- Nucleic Acids Research, Vol. 38, Issue 16
Identification and Functional Demonstration of miRNAs in the Fungus Cryptococcus neoformans
journal, December 2012
- Jiang, Nan; Yang, Yaping; Janbon, Guilhem
- PLoS ONE, Vol. 7, Issue 12
Two distinct RNA-dependent RNA polymerases are required for initiation and amplification of RNA silencing in the basal fungus Mucor circinelloides: The rdrp genes of Mucor circinelloides
journal, December 2011
- Calo, Silvia; Nicolás, Francisco E.; Vila, Ana
- Molecular Microbiology, Vol. 83, Issue 2
A Single Argonaute Gene Participates in Exogenous and Endogenous RNAi and Controls Cellular Functions in the Basal Fungus Mucor circinelloides
journal, July 2013
- Cervantes, María; Vila, Ana; Nicolás, Francisco E.
- PLoS ONE, Vol. 8, Issue 7
Regulation of mRNA Translation and Stability by microRNAs
journal, June 2010
- Fabian, Marc Robert; Sonenberg, Nahum; Filipowicz, Witold
- Annual Review of Biochemistry, Vol. 79, Issue 1
Functional Diversity of RNAi-Associated sRNAs in Fungi
journal, July 2013
- Nicolás, Francisco; Ruiz-Vázquez, Rosa
- International Journal of Molecular Sciences, Vol. 14, Issue 8
DCL-1 colocalizes with other components of the MSUD machinery and is required for silencing
journal, May 2008
- Alexander, William G.; Raju, Namboori B.; Xiao, Hua
- Fungal Genetics and Biology, Vol. 45, Issue 5
Dicer-Dependent Biogenesis of Small RNAs and Evidence for MicroRNA-Like RNAs in the Penicillin Producing Fungus Penicillium chrysogenum
journal, May 2015
- Dahlmann, Tim A.; Kück, Ulrich
- PLOS ONE, Vol. 10, Issue 5
Regulation of Autolysis in Aspergillus nidulans
journal, March 2008
- Emri, Tamás; Molnár, Zsolt; Szilágyi, Melinda
- Applied Biochemistry and Biotechnology, Vol. 151, Issue 2-3
Diverse Pathways Generate MicroRNA-like RNAs and Dicer-Independent Small Interfering RNAs in Fungi
journal, June 2010
- Lee, Heng-Chi; Li, Liande; Gu, Weifeng
- Molecular Cell, Vol. 38, Issue 6
Mutants defective in a Mucor circinelloides dicer-like gene are not compromised in siRNA silencing but display developmental defects
journal, June 2007
- Nicolás, Francisco E.; de Haro, Juan P.; Torres-Martínez, Santiago
- Fungal Genetics and Biology, Vol. 44, Issue 6
The DNA/RNA-Dependent RNA Polymerase QDE-1 Generates Aberrant RNA and dsRNA for RNAi in a Process Requiring Replication Protein A and a DNA Helicase
journal, October 2010
- Lee, Heng-Chi; Aalto, Antti P.; Yang, Qiuying
- PLoS Biology, Vol. 8, Issue 10
MicroRNA-Like Small RNAs Prediction in the Development of Antrodia cinnamomea
journal, April 2015
- Lin, Yan-Liang; Ma, Li-Ting; Lee, Yi-Ru
- PLOS ONE, Vol. 10, Issue 4
An Arabidopsis RNase III-like protein, AtRTL2, cleaves double-stranded RNA in vitro
journal, October 2010
- Kiyota, Eri; Okada, Ryo; Kondo, Naoko
- Journal of Plant Research, Vol. 124, Issue 3
Heme biosynthesis and its regulation: towards understanding and improvement of heme biosynthesis in filamentous fungi
journal, June 2011
- Franken, Angelique C. W.; Lokman, B. Christien; Ram, Arthur F. J.
- Applied Microbiology and Biotechnology, Vol. 91, Issue 3
Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans
journal, April 1990
- Napoli, Carolyn; Lemieux, Christine; Jorgensen, Richard
- The Plant Cell, Vol. 2, Issue 4
Identification of MicroRNA-Like RNAs in Mycelial and Yeast Phases of the Thermal Dimorphic Fungus Penicillium marneffei
journal, August 2013
- Lau, Susanna K. P.; Chow, Wang-Ngai; Wong, Annette Y. P.
- PLoS Neglected Tropical Diseases, Vol. 7, Issue 8
Identification of microRNA-Like RNAs in the Filamentous Fungus Trichoderma reesei by Solexa Sequencing
journal, October 2013
- Kang, Kang; Zhong, Jiasheng; Jiang, Liang
- PLoS ONE, Vol. 8, Issue 10
A Single dicer Gene Is Required for Efficient Gene Silencing Associated with Two Classes of Small Antisense RNAs in Mucor circinelloides
journal, August 2009
- de Haro, Juan P.; Calo, Silvia; Cervantes, María
- Eukaryotic Cell, Vol. 8, Issue 10
Efficient gene silencing by expression of double stranded RNA in Neurospora crassa
journal, November 2004
- Goldoni, Marina; Azzalin, Gianluca; Macino, Giuseppe
- Fungal Genetics and Biology, Vol. 41, Issue 11
RNAi function, diversity, and loss in the fungal kingdom
journal, October 2013
- Billmyre, R. Blake; Calo, Silvia; Feretzaki, Marianna
- Chromosome Research, Vol. 21, Issue 6-7
Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3′ETS in Arabidopsis
journal, December 2007
- Comella, P.; Pontvianne, F.; Lahmy, S.
- Nucleic Acids Research, Vol. 36, Issue 4
Identification and characterization of genes induced during sexual differentiation in Schizosaccharomyces pombe
journal, July 1994
- Sato, Shusei; Suzuki, Hideki; Widyastuti, Utut
- Current Genetics, Vol. 26, Issue 1
A Non-canonical RNA Silencing Pathway Promotes mRNA Degradation in Basal Fungi
journal, April 2015
- Trieu, Trung Anh; Calo, Silvia; Nicolás, Francisco E.
- PLOS Genetics, Vol. 11, Issue 4