Edge illumination X-ray phase tomography of multi-material samples using a single-image phase retrieval algorithm

Zamir, Anna; Diemoz, Paul C.; Vittoria, Fabio A.; Hagen, Charlotte K.; Endrizzi, Marco; Olivo, Alessandro

doi:10.1364/OE.25.011984

Title: Edge illumination X-ray phase tomography of multi-material samples using a single-image phase retrieval algorithm

Authors:: Zamir, Anna; Diemoz, Paul C.; Vittoria, Fabio A.; Hagen, Charlotte K.; Endrizzi, Marco; Olivo, Alessandro

Publication Date:: Fri May 12 00:00:00 EDT 2017

Sponsoring Org.:: USDOE

OSTI Identifier:: 1356747

Grant/Contract Number:: AC02-06CH11357

Resource Type:: Published Article

Journal Name:: Optics Express

Additional Journal Information:: Journal Name: Optics Express Journal Volume: 25 Journal Issue: 10; Journal ID: ISSN 1094-4087

Publisher:: Optical Society of America (OSA)

Country of Publication:: United States

Language:: English

Citation Formats


                    Zamir, Anna, Diemoz, Paul C., Vittoria, Fabio A., Hagen, Charlotte K., Endrizzi, Marco, and Olivo, Alessandro. Edge illumination X-ray phase tomography of multi-material samples using a single-image phase retrieval algorithm.  United States: N. p., 2017. 
Web.  doi:10.1364/OE.25.011984.

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                    Zamir, Anna, Diemoz, Paul C., Vittoria, Fabio A., Hagen, Charlotte K., Endrizzi, Marco, & Olivo, Alessandro. Edge illumination X-ray phase tomography of multi-material samples using a single-image phase retrieval algorithm.  United States.  https://doi.org/10.1364/OE.25.011984

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                    Zamir, Anna, Diemoz, Paul C., Vittoria, Fabio A., Hagen, Charlotte K., Endrizzi, Marco, and Olivo, Alessandro. Fri .  
"Edge illumination X-ray phase tomography of multi-material samples using a single-image phase retrieval algorithm".  United States.  https://doi.org/10.1364/OE.25.011984.

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@article{osti_1356747,

  title        = {Edge illumination X-ray phase tomography of multi-material samples using a single-image phase retrieval algorithm},

  author       = {Zamir, Anna and Diemoz, Paul C. and Vittoria, Fabio A. and Hagen, Charlotte K. and Endrizzi, Marco and Olivo, Alessandro},

  abstractNote = {},

  doi          = {10.1364/OE.25.011984},

  journal      = {Optics Express},

  number       = 10,

  volume       = 25,

  place        = {United States},

  year         = {Fri May 12 00:00:00 EDT 2017},

  month        = {Fri May 12 00:00:00 EDT 2017}

}

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Works referenced in this record:

Strategies for efficient and fast wave optics simulation of coded-aperture and other x-ray phase-contrast imaging methods
journal, January 2013

Vittoria, Fabio A.; Diemoz, Paul C.; Endrizzi, Marco
Applied Optics, Vol. 52, Issue 28
DOI: 10.1364/AO.52.006940

Modelling of a novel x-ray phase contrast imaging technique based on coded apertures
journal, October 2007

Olivo, A.; Speller, R.
Physics in Medicine and Biology, Vol. 52, Issue 22
DOI: 10.1088/0031-9155/52/22/001

Edge-illumination X-ray phase contrast imaging: matching the imaging method to the detector technology
journal, November 2014

Endrizzi, M.; Diemoz, P. C.; Hagen, C. K.
Journal of Instrumentation, Vol. 9, Issue 11
DOI: 10.1088/1748-0221/9/11/C11004

Simultaneous phase and amplitude extraction from a single defocused image of a homogeneous object
journal, April 2002

Paganin, D.; Mayo, S. C.; Gureyev, T. E.
Journal of Microscopy, Vol. 206, Issue 1
DOI: 10.1046/j.1365-2818.2002.01010.x

X-ray phase-contrast imaging with polychromatic sources and the concept of effective energy
journal, May 2013

Munro, Peter R. T.; Olivo, Alessandro
Physical Review A, Vol. 87, Issue 5
DOI: 10.1103/PhysRevA.87.053838

Phase and absorption retrieval using incoherent X-ray sources
journal, August 2012

Munro, P. R. T.; Ignatyev, K.; Speller, R. D.
Proceedings of the National Academy of Sciences, Vol. 109, Issue 35
DOI: 10.1073/pnas.1205396109

Phase retrieval and differential phase-contrast imaging with low-brilliance X-ray sources
journal, March 2006

Pfeiffer, Franz; Weitkamp, Timm; Bunk, Oliver
Nature Physics, Vol. 2, Issue 4, p. 258-261
DOI: 10.1038/nphys265

A coded-aperture technique allowing x-ray phase contrast imaging with conventional sources
journal, August 2007

Olivo, Alessandro; Speller, Robert
Applied Physics Letters, Vol. 91, Issue 7
DOI: 10.1063/1.2772193

Low-dose phase contrast tomography with conventional x-ray sources: Low-dose phase contrast tomography with conventional x-ray sources
journal, June 2014

Hagen, C. K.; Munro, P. R. T.; Endrizzi, M.
Medical Physics, Vol. 41, Issue 7
DOI: 10.1118/1.4884297

The effect of the spatial sampling rate on quantitative phase information extracted from planar and tomographic edge illumination x-ray phase contrast images
journal, October 2014

Hagen, C. K.; Diemoz, P. C.; Endrizzi, M.
Journal of Physics D: Applied Physics, Vol. 47, Issue 45
DOI: 10.1088/0022-3727/47/45/455401

Achromatic approach to phase-based multi-modal imaging with conventional X-ray sources
journal, January 2015

Endrizzi, Marco; Vittoria, Fabio A.; Kallon, Gibril
Optics Express, Vol. 23, Issue 12
DOI: 10.1364/OE.23.016473

X-ray phase-contrast imaging: from pre-clinical applications towards clinics
journal, December 2012

Bravin, Alberto; Coan, Paola; Suortti, Pekka
Physics in Medicine and Biology, Vol. 58, Issue 1
DOI: 10.1088/0031-9155/58/1/R1

Deterministic phase retrieval: a Green’s function solution
journal, January 1983

Teague, Michael Reed
Journal of the Optical Society of America, Vol. 73, Issue 11
DOI: 10.1364/JOSA.73.001434

Phase-contrast imaging using polychromatic hard X-rays
journal, November 1996

Wilkins, S. W.; Gureyev, T. E.; Gao, D.
Nature, Vol. 384, Issue 6607
DOI: 10.1038/384335a0

Cartilage and Soft Tissue Imaging Using X-rays: Propagation-Based Phase-Contrast Computed Tomography of the Human Knee in Comparison With Clinical Imaging Techniques and Histology
journal, January 2014

Horng, Annie; Brun, Emmanuel; Mittone, Alberto
Investigative Radiology, Vol. 49, Issue 9
DOI: 10.1097/RLI.0000000000000063

Three-dimensional mouse brain cytoarchitecture revealed by laboratory-based x-ray phase-contrast tomography
journal, February 2017

Töpperwien, Mareike; Krenkel, Martin; Vincenz, Daniel
Scientific Reports, Vol. 7, Issue 1
DOI: 10.1038/srep42847

Requirements for dynamical differential phase contrast x-ray imaging with a laboratory source
journal, November 2016

Macindoe, David; Kitchen, Marcus J.; Irvine, Sarah C.
Physics in Medicine and Biology, Vol. 61, Issue 24
DOI: 10.1088/1361-6560/61/24/8720

On the possibilities of x‐ray phase contrast microimaging by coherent high‐energy synchrotron radiation
journal, December 1995

Snigirev, A.; Snigireva, I.; Kohn, V.
Review of Scientific Instruments, Vol. 66, Issue 12
DOI: 10.1063/1.1146073

In-Line Phase-Contrast X-ray Imaging and Tomography for Materials Science
journal, May 2012

Mayo, Sheridan C.; Stevenson, Andrew W.; Wilkins, Stephen W.
Materials, Vol. 5, Issue 12
DOI: 10.3390/ma5050937

On the origin of contrast in edge illumination X-ray phase-contrast imaging
journal, January 2014

Diemoz, Paul C.; Olivo, Alessandro
Optics Express, Vol. 22, Issue 23
DOI: 10.1364/OE.22.028199

2D and 3D X-ray phase retrieval of multi-material objects using a single defocus distance
journal, January 2010

Beltran, M. A.; Paganin, D. M.; Uesugi, K.
Optics Express, Vol. 18, Issue 7
DOI: 10.1364/OE.18.006423

Image formation principles in coded-aperture based x-ray phase contrast imaging
journal, October 2008

Olivo, A.; Speller, R.
Physics in Medicine and Biology, Vol. 53, Issue 22
DOI: 10.1088/0031-9155/53/22/012

Demonstration of X-Ray Talbot Interferometry
journal, July 2003

Momose, Atsushi; Kawamoto, Shinya; Koyama, Ichiro
Japanese Journal of Applied Physics, Vol. 42, Issue Part 2, No. 7B
DOI: 10.1143/JJAP.42.L866

Spatial resolution of edge illumination X-ray phase-contrast imaging
journal, January 2014

Diemoz, Paul C.; Vittoria, Fabio A.; Olivo, Alessandro
Optics Express, Vol. 22, Issue 13
DOI: 10.1364/OE.22.015514

Design of a novel phase contrast x-ray imaging system for mammography
journal, July 2010

Munro, Peter R. T.; Ignatyev, Konstantin; Speller, Robert D.
Physics in Medicine and Biology, Vol. 55, Issue 14
DOI: 10.1088/0031-9155/55/14/014

Quantitative single-exposure x-ray phase contrast imaging using a single attenuation grid
journal, January 2011

Morgan, Kaye S.; Paganin, David M.; Siu, Karen K. W.
Optics Express, Vol. 19, Issue 20
DOI: 10.1364/OE.19.019781

X-Ray Phase-Contrast Imaging with Nanoradian Angular Resolution
journal, March 2013

Diemoz, P. C.; Endrizzi, M.; Zapata, C. E.
Physical Review Letters, Vol. 110, Issue 13
DOI: 10.1103/PhysRevLett.110.138105

Interface-specific x-ray phase retrieval tomography of complex biological organs
journal, November 2011

Beltran, M. A.; Paganin, D. M.; Siu, K. K. W.
Physics in Medicine and Biology, Vol. 56, Issue 23
DOI: 10.1088/0031-9155/56/23/002

Chromatic X-ray imaging with a fine pitch CdTe sensor coupled to a large area photon counting pixel ASIC
journal, February 2013

Bellazzini, R.; Spandre, G.; Brez, A.
Journal of Instrumentation, Vol. 8, Issue 02
DOI: 10.1088/1748-0221/8/02/C02028

Single-image phase retrieval using an edge illumination X-ray phase-contrast imaging setup
journal, June 2015

Diemoz, Paul C.; Vittoria, Fabio A.; Hagen, Charlotte K.
Journal of Synchrotron Radiation, Vol. 22, Issue 4
DOI: 10.1107/S1600577515008978

Effects of signal diffusion on x-ray phase contrast images
journal, July 2011

Ignatyev, K.; Munro, P. R. T.; Speller, R. D.
Review of Scientific Instruments, Vol. 82, Issue 7
DOI: 10.1063/1.3606442

On the evolution and relative merits of hard X-ray phase-contrast imaging methods
journal, March 2014

Wilkins, S. W.; Nesterets, Ya. I.; Gureyev, T. E.
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 372, Issue 2010
DOI: 10.1098/rsta.2013.0021

A Threshold Selection Method from Gray-Level Histograms
journal, January 1979

Otsu, Nobuyuki
IEEE Transactions on Systems, Man, and Cybernetics, Vol. 9, Issue 1
DOI: 10.1109/TSMC.1979.4310076

An innovative digital imaging set-up allowing a low-dose approach to phase contrast applications in the medical field
journal, August 2001

Olivo, A.; Arfelli, F.; Cantatore, G.
Medical Physics, Vol. 28, Issue 8
DOI: 10.1118/1.1388219

Some simple rules for contrast, signal-to-noise and resolution in in-line x-ray phase-contrast imaging
journal, January 2008

Gureyev, Timur E.; Nesterets, Yakov I.; Stevenson, Andrew W.
Optics Express, Vol. 16, Issue 5
DOI: 10.1364/OE.16.003223

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Title: Edge illumination X-ray phase tomography of multi-material samples using a single-image phase retrieval algorithm

Citation Formats

Strategies for efficient and fast wave optics simulation of coded-aperture and other x-ray phase-contrast imaging methods journal, January 2013

Modelling of a novel x-ray phase contrast imaging technique based on coded apertures journal, October 2007

Edge-illumination X-ray phase contrast imaging: matching the imaging method to the detector technology journal, November 2014

Simultaneous phase and amplitude extraction from a single defocused image of a homogeneous object journal, April 2002

X-ray phase-contrast imaging with polychromatic sources and the concept of effective energy journal, May 2013

Phase and absorption retrieval using incoherent X-ray sources journal, August 2012

Phase retrieval and differential phase-contrast imaging with low-brilliance X-ray sources journal, March 2006

A coded-aperture technique allowing x-ray phase contrast imaging with conventional sources journal, August 2007

Low-dose phase contrast tomography with conventional x-ray sources: Low-dose phase contrast tomography with conventional x-ray sources journal, June 2014

The effect of the spatial sampling rate on quantitative phase information extracted from planar and tomographic edge illumination x-ray phase contrast images journal, October 2014

Achromatic approach to phase-based multi-modal imaging with conventional X-ray sources journal, January 2015

X-ray phase-contrast imaging: from pre-clinical applications towards clinics journal, December 2012

Deterministic phase retrieval: a Green’s function solution journal, January 1983

Phase-contrast imaging using polychromatic hard X-rays journal, November 1996

Cartilage and Soft Tissue Imaging Using X-rays: Propagation-Based Phase-Contrast Computed Tomography of the Human Knee in Comparison With Clinical Imaging Techniques and Histology journal, January 2014

Three-dimensional mouse brain cytoarchitecture revealed by laboratory-based x-ray phase-contrast tomography journal, February 2017

Requirements for dynamical differential phase contrast x-ray imaging with a laboratory source journal, November 2016

On the possibilities of x‐ray phase contrast microimaging by coherent high‐energy synchrotron radiation journal, December 1995

In-Line Phase-Contrast X-ray Imaging and Tomography for Materials Science journal, May 2012

On the origin of contrast in edge illumination X-ray phase-contrast imaging journal, January 2014

2D and 3D X-ray phase retrieval of multi-material objects using a single defocus distance journal, January 2010

Image formation principles in coded-aperture based x-ray phase contrast imaging journal, October 2008

Demonstration of X-Ray Talbot Interferometry journal, July 2003

Spatial resolution of edge illumination X-ray phase-contrast imaging journal, January 2014

Design of a novel phase contrast x-ray imaging system for mammography journal, July 2010

Quantitative single-exposure x-ray phase contrast imaging using a single attenuation grid journal, January 2011

X-Ray Phase-Contrast Imaging with Nanoradian Angular Resolution journal, March 2013

Interface-specific x-ray phase retrieval tomography of complex biological organs journal, November 2011

Chromatic X-ray imaging with a fine pitch CdTe sensor coupled to a large area photon counting pixel ASIC journal, February 2013

Single-image phase retrieval using an edge illumination X-ray phase-contrast imaging setup journal, June 2015

Effects of signal diffusion on x-ray phase contrast images journal, July 2011

On the evolution and relative merits of hard X-ray phase-contrast imaging methods journal, March 2014

A Threshold Selection Method from Gray-Level Histograms journal, January 1979

An innovative digital imaging set-up allowing a low-dose approach to phase contrast applications in the medical field journal, August 2001

Some simple rules for contrast, signal-to-noise and resolution in in-line x-ray phase-contrast imaging journal, January 2008

Strategies for efficient and fast wave optics simulation of coded-aperture and other x-ray phase-contrast imaging methods
journal, January 2013

Modelling of a novel x-ray phase contrast imaging technique based on coded apertures
journal, October 2007

Edge-illumination X-ray phase contrast imaging: matching the imaging method to the detector technology
journal, November 2014

Simultaneous phase and amplitude extraction from a single defocused image of a homogeneous object
journal, April 2002

X-ray phase-contrast imaging with polychromatic sources and the concept of effective energy
journal, May 2013

Phase and absorption retrieval using incoherent X-ray sources
journal, August 2012

Phase retrieval and differential phase-contrast imaging with low-brilliance X-ray sources
journal, March 2006

A coded-aperture technique allowing x-ray phase contrast imaging with conventional sources
journal, August 2007

Low-dose phase contrast tomography with conventional x-ray sources: Low-dose phase contrast tomography with conventional x-ray sources
journal, June 2014

The effect of the spatial sampling rate on quantitative phase information extracted from planar and tomographic edge illumination x-ray phase contrast images
journal, October 2014

Achromatic approach to phase-based multi-modal imaging with conventional X-ray sources
journal, January 2015

X-ray phase-contrast imaging: from pre-clinical applications towards clinics
journal, December 2012

Deterministic phase retrieval: a Green’s function solution
journal, January 1983

Phase-contrast imaging using polychromatic hard X-rays
journal, November 1996

Cartilage and Soft Tissue Imaging Using X-rays: Propagation-Based Phase-Contrast Computed Tomography of the Human Knee in Comparison With Clinical Imaging Techniques and Histology
journal, January 2014

Three-dimensional mouse brain cytoarchitecture revealed by laboratory-based x-ray phase-contrast tomography
journal, February 2017

Requirements for dynamical differential phase contrast x-ray imaging with a laboratory source
journal, November 2016

On the possibilities of x‐ray phase contrast microimaging by coherent high‐energy synchrotron radiation
journal, December 1995

In-Line Phase-Contrast X-ray Imaging and Tomography for Materials Science
journal, May 2012

On the origin of contrast in edge illumination X-ray phase-contrast imaging
journal, January 2014

2D and 3D X-ray phase retrieval of multi-material objects using a single defocus distance
journal, January 2010

Image formation principles in coded-aperture based x-ray phase contrast imaging
journal, October 2008

Demonstration of X-Ray Talbot Interferometry
journal, July 2003

Spatial resolution of edge illumination X-ray phase-contrast imaging
journal, January 2014

Design of a novel phase contrast x-ray imaging system for mammography
journal, July 2010

Quantitative single-exposure x-ray phase contrast imaging using a single attenuation grid
journal, January 2011

X-Ray Phase-Contrast Imaging with Nanoradian Angular Resolution
journal, March 2013

Interface-specific x-ray phase retrieval tomography of complex biological organs
journal, November 2011

Chromatic X-ray imaging with a fine pitch CdTe sensor coupled to a large area photon counting pixel ASIC
journal, February 2013

Single-image phase retrieval using an edge illumination X-ray phase-contrast imaging setup
journal, June 2015

Effects of signal diffusion on x-ray phase contrast images
journal, July 2011

On the evolution and relative merits of hard X-ray phase-contrast imaging methods
journal, March 2014

A Threshold Selection Method from Gray-Level Histograms
journal, January 1979

An innovative digital imaging set-up allowing a low-dose approach to phase contrast applications in the medical field
journal, August 2001

Some simple rules for contrast, signal-to-noise and resolution in in-line x-ray phase-contrast imaging
journal, January 2008