DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Alteration of the α1β22β1 subunit interface contributes to the increased hemoglobin-oxygen affinity of high-altitude deer mice

Journal Article · · PLoS ONE

Deer mice (Peromyscus maniculatus) that are native to high altitudes in the Rocky Mountains have evolved hemoglobins with an increased oxygen-binding affinity relative to those of lowland conspecifics. To elucidate the molecular mechanisms responsible for the evolved increase in hemoglobin-oxygen affinity, the crystal structure of the highland hemoglobin variant was solved and compared with the previously reported structure for the lowland variant. Highland hemoglobin yielded at least two crystal types, in which the longest axes were 507 and 230 Å. Using the smaller unit cell crystal, the structure was solved at 2.2 Å resolution. The asymmetric unit contained two tetrameric hemoglobin molecules. The analyses revealed that αPro50 in the highland hemoglobin variant promoted a stable interaction between αHis45 and heme that was not seen in the αHis50 lowland variant. The αPro50 mutation also altered the nature of atomic contacts at the α1β22β1 intersubunit interfaces. These results demonstrate how affinity-altering changes in intersubunit interactions can be produced by mutations at structurally remote sites.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Organization:
National Inst. of Health/National Heart, Lung, and Blood Inst.
OSTI ID:
1349928
Journal Information:
PLoS ONE, Journal Name: PLoS ONE Journal Issue: 3 Vol. 12; ISSN 1932-6203
Publisher:
Public Library of ScienceCopyright Statement
Country of Publication:
United States
Language:
ENGLISH

References (47)

Genetic differences in hemoglobin function between highland and lowland deer mice journal July 2010
Direct observation of photolysis-induced tertiary structural changes in hemoglobin journal May 2003
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features journal December 1983
Features and development of Coot journal March 2010
Mechanisms of Hemoglobin Adaptation to High Altitude Hypoxia journal June 2008
Hemoglobin Site-mutants Reveal Dynamical Role of Interhelical H-bonds in the Allosteric Pathway: Time-resolved UV Resonance Raman Evidence for Intra-dimer Coupling journal July 2004
PHENIX: a comprehensive Python-based system for macromolecular structure solution journal January 2010
Hemoglobin–oxygen affinity in high-altitude vertebrates: is there evidence for an adaptive trend? journal October 2016
Phenotypic plasticity and genetic adaptation to high-altitude hypoxia in vertebrates journal November 2010
Stereochemistry of Cooperative Effects in Haemoglobin: Haem–Haem Interaction and the Problem of Allostery journal November 1970
Allosteric interpretation of the oxygen-binding reaction of human hemoglobin tetramers journal June 1987
Epistasis Among Adaptive Mutations in Deer Mouse Hemoglobin journal June 2013
Effective Simulations of Gas Diffusion Through Kinetically Accessible Tunnels in Multisubunit Proteins: O 2 Pathways and Escape Routes in T-state Deoxyhemoglobin journal June 2012
Experimental basis for a new allosteric model for multisubunit proteins journal August 2014
On the nature of allosteric transitions: Implications of non-exclusive ligand binding journal November 1966
Haemoglobin: The structural changes related to ligand binding and its allosteric mechanism journal April 1979
Protein Conformational Relaxation and Ligand Migration in Myoglobin:  A Nanosecond to Millisecond Molecular Movie from Time-Resolved Laue X-ray Diffraction journal November 2001
Mechanisms of Hemoglobin Adaptation to High Altitude Hypoxia journal June 2008
Blocking the Gate to Ligand Entry in Human Hemoglobin journal December 2010
Inference of Macromolecular Assemblies from Crystalline State journal September 2007
Hemoglobin–oxygen affinity in high-altitude vertebrates: is there evidence for an adaptive trend? journal October 2016
Deer mouse hemoglobin exhibits a lowered oxygen affinity owing to mobility of the E helix
  • Inoguchi, Noriko; Oshlo, Jake R.; Natarajan, Chandrasekhar
  • Acta Crystallographica Section F Structural Biology and Crystallization Communications, Vol. 69, Issue 4 https://doi.org/10.1107/S1744309113005708
journal March 2013
1.25 Å Resolution Crystal Structures of Human Haemoglobin in the Oxy, Deoxy and Carbonmonoxy Forms journal July 2006
R-state Haemoglobin with Low Oxygen Affinity: Crystal Structures of Deoxy Human and Carbonmonoxy Horse Haemoglobin Bound to the Effector Molecule L35 journal February 2006
Structure of the Altitude Adapted Hemoglobin of Guinea Pig in the R2-State journal August 2010
A solution for the best rotation to relate two sets of vectors journal September 1976
Nature of Haem–Haem Interaction journal June 1972
Haemoglobin: The structural changes related to ligand binding and its allosteric mechanism journal April 1979
Structural analysis of fish versus mammalian hemoglobins: Effect of the heme pocket environment on autooxidation and hemin loss journal September 2008
Photolysis of the Carbon Monoxide Complex of Myoglobin: Nanosecond Time-Resolved Crystallography journal December 1996
A solution for the best rotation to relate two sets of vectors journal September 1976
Photolysis of the Carbon Monoxide Complex of Myoglobin: Nanosecond Time-Resolved Crystallography journal December 1996
Crystal structure of sickle-cell deoxyhemoglobin at 5 Å resolution journal October 1975
Epistasis Among Adaptive Mutations in Deer Mouse Hemoglobin journal June 2013
Genetic differences in hemoglobin function between highland and lowland deer mice journal July 2010
Bohr effect and temperature sensitivity of hemoglobins from highland and lowland deer mice journal May 2016
Features and development of Coot journal March 2010
Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin journal August 2009
Experimental basis for a new allosteric model for multisubunit proteins journal August 2014
Intraspecific Polymorphism, Interspecific Divergence, and the Origins of Function-Altering Mutations in Deer Mouse Hemoglobin journal January 2015
Expression and Purification of Recombinant Hemoglobin in Escherichia coli journal May 2011
Crystal structure of sickle-cell deoxyhemoglobin at 5 Å resolution journal October 1975
On the nature of allosteric transitions: Implications of non-exclusive ligand binding journal November 1966
Blocking the Gate to Ligand Entry in Human Hemoglobin journal December 2010
A series of PDB related databases for everyday needs journal November 2010
Effective Simulations of Gas Diffusion Through Kinetically Accessible Tunnels in Multisubunit Proteins: O 2 Pathways and Escape Routes in T-state Deoxyhemoglobin journal June 2012
Unsuspected pathway of the allosteric transition in hemoglobin journal March 2011

Cited By (1)

Acclimatization of low altitude-bred deer mice ( Peromyscus maniculatus ) to high altitude journal November 2018