50 years of Arabidopsis research: highlights and future directions
Abstract
The year 2014 marked the 25th International Conference on Arabidopsis Research. In the 50 yr since the first International Conference on Arabidopsis Research, held in 1965 in Göttingen, Germany, > 54 000 papers that mention Arabidopsis thaliana in the title, abstract or keywords have been published. In this paper, we present herein a citational network analysis of these papers, and touch on some of the important discoveries in plant biology that have been made in this powerful model system, and highlight how these discoveries have then had an impact in crop species. We also look to the future, highlighting some outstanding questions that can be readily addressed in Arabidopsis. Topics that are discussed include Arabidopsis reverse genetic resources, stock centers, databases and online tools, cell biology, development, hormones, plant immunity, signaling in response to abiotic stress, transporters, biosynthesis of cells walls and macromolecules such as starch and lipids, epigenetics and epigenomics, genome-wide association studies and natural variation, gene regulatory networks, modeling and systems biology, and synthetic biology.
- Authors:
-
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- Univ. of Toronto, ON (Canada). Department of Cell & Systems Biology/CAGEF
- North Carolina State Univ., Raleigh, NC (United States). Department of Plant and Microbial Biology
- Pennsylvania State Univ., University Park, PA (United States). Department of Biology
- Stanford Univ., CA (United States). Department of Biology
- Univ. of California, Davis, CA (United States). Department of Plant Biology
- The Ohio State Univ., Columbus, OH (United States). Arabidopsis Biological Resource Center
- Washington State Univ., Pullman, WA (United States). Institute of Biological Chemistry
- Purdue Univ., West Lafayette, IN (United States). Department of Biochemistry
- Biologie Moleculaire des Organismes Photosynthetiques, Paris (France). Departement de Biologie Ecole Normale Superieure
- Univ. of California, Riverside, CA (United States). Department of Botany and Plant Sciences
- Univ. of North Carolina, Chapel Hill, NC (United States). Department of Biology and Howard Hughes Medical Institute
- Carnegie Inst. of Science, Stanford, CA (United States). Department of Plant Biology
- Univ. of California, Davis, CA (United States). Department of Plant Biology, Agricultural Sustainability Institute
- The Ohio State Univ., Columbus, OH (United States). Center for Applied Plant Science
- California Inst. of Technology (CalTech), Pasadena, CA (United States). Division of Biology and Biological Engineering and Howard Hughes Medical Institute
- Univ. of Washington, Seattle, WA (United States). Department of Biology
- Gregor Mendel Institute of Molecular Plant Biology, Vienna (Austria)
- Indiana Univ., Bloomington, IN (United States). Department of Biology
- Brookhaven National Lab. (BNL), Upton, NY (United States). Biology Department
- Univ. of California, Berkeley, CA (United States). Energy Biosciences Institute
- Max Planck Institute for Molecular Plant Physiology, Potsdam (Germany). Metabolic Networks Department
- Univ. of Pennsylvania, Philadelphia, PA (United States). Department of Biology
- Publication Date:
- Research Org.:
- Brookhaven National Laboratory (BNL), Upton, NY (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES)
- OSTI Identifier:
- 1335407
- Report Number(s):
- BNL-111854-2016-JA
Journal ID: ISSN 0028-646X; R&D Project: BO-059; KC0304020
- Grant/Contract Number:
- SC00112704
- Resource Type:
- Accepted Manuscript
- Journal Name:
- New Phytologist
- Additional Journal Information:
- Journal Volume: 209; Journal Issue: 3; Journal ID: ISSN 0028-646X
- Publisher:
- Wiley
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; Arabidopsis; epigenetics; genome; synthetic biology; reverse genetics; signaling; development; model system
Citation Formats
Provart, Nicholas J., Alonso, Jose, Assmann, Sarah M., Bergmann, Dominique, Brady, Siobhan M., Brkljacic, Jelena, Browse, John, Chapple, Clint, Colot, Vincent, Cutler, Sean, Dangl, Jeff, Ehrhardt, David, Friesner, Joanna D., Frommer, Wolf B., Grotewold, Erich, Meyerowitz, Elliot, Nemhauser, Jennifer, Nordborg, Magnus, Pikaard, Craig, Shanklin, John, Somerville, Chris, Stitt, Mark, Torii, Keiko U., Waese, Jamie, Wagner, Doris, and McCourt, Peter. 50 years of Arabidopsis research: highlights and future directions. United States: N. p., 2015.
Web. doi:10.1111/nph.13687.
Provart, Nicholas J., Alonso, Jose, Assmann, Sarah M., Bergmann, Dominique, Brady, Siobhan M., Brkljacic, Jelena, Browse, John, Chapple, Clint, Colot, Vincent, Cutler, Sean, Dangl, Jeff, Ehrhardt, David, Friesner, Joanna D., Frommer, Wolf B., Grotewold, Erich, Meyerowitz, Elliot, Nemhauser, Jennifer, Nordborg, Magnus, Pikaard, Craig, Shanklin, John, Somerville, Chris, Stitt, Mark, Torii, Keiko U., Waese, Jamie, Wagner, Doris, & McCourt, Peter. 50 years of Arabidopsis research: highlights and future directions. United States. https://doi.org/10.1111/nph.13687
Provart, Nicholas J., Alonso, Jose, Assmann, Sarah M., Bergmann, Dominique, Brady, Siobhan M., Brkljacic, Jelena, Browse, John, Chapple, Clint, Colot, Vincent, Cutler, Sean, Dangl, Jeff, Ehrhardt, David, Friesner, Joanna D., Frommer, Wolf B., Grotewold, Erich, Meyerowitz, Elliot, Nemhauser, Jennifer, Nordborg, Magnus, Pikaard, Craig, Shanklin, John, Somerville, Chris, Stitt, Mark, Torii, Keiko U., Waese, Jamie, Wagner, Doris, and McCourt, Peter. Wed .
"50 years of Arabidopsis research: highlights and future directions". United States. https://doi.org/10.1111/nph.13687. https://www.osti.gov/servlets/purl/1335407.
@article{osti_1335407,
title = {50 years of Arabidopsis research: highlights and future directions},
author = {Provart, Nicholas J. and Alonso, Jose and Assmann, Sarah M. and Bergmann, Dominique and Brady, Siobhan M. and Brkljacic, Jelena and Browse, John and Chapple, Clint and Colot, Vincent and Cutler, Sean and Dangl, Jeff and Ehrhardt, David and Friesner, Joanna D. and Frommer, Wolf B. and Grotewold, Erich and Meyerowitz, Elliot and Nemhauser, Jennifer and Nordborg, Magnus and Pikaard, Craig and Shanklin, John and Somerville, Chris and Stitt, Mark and Torii, Keiko U. and Waese, Jamie and Wagner, Doris and McCourt, Peter},
abstractNote = {The year 2014 marked the 25th International Conference on Arabidopsis Research. In the 50 yr since the first International Conference on Arabidopsis Research, held in 1965 in Göttingen, Germany, > 54 000 papers that mention Arabidopsis thaliana in the title, abstract or keywords have been published. In this paper, we present herein a citational network analysis of these papers, and touch on some of the important discoveries in plant biology that have been made in this powerful model system, and highlight how these discoveries have then had an impact in crop species. We also look to the future, highlighting some outstanding questions that can be readily addressed in Arabidopsis. Topics that are discussed include Arabidopsis reverse genetic resources, stock centers, databases and online tools, cell biology, development, hormones, plant immunity, signaling in response to abiotic stress, transporters, biosynthesis of cells walls and macromolecules such as starch and lipids, epigenetics and epigenomics, genome-wide association studies and natural variation, gene regulatory networks, modeling and systems biology, and synthetic biology.},
doi = {10.1111/nph.13687},
journal = {New Phytologist},
number = 3,
volume = 209,
place = {United States},
year = {Wed Oct 14 00:00:00 EDT 2015},
month = {Wed Oct 14 00:00:00 EDT 2015}
}
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Works referenced in this record:
Arabidopsis and the plant immune system
text, January 2010
- T., Nishimura, Marc; L., Dangl, Jeffery
- The University of North Carolina at Chapel Hill University Libraries
Genome-wide association study of leaf architecture in the maize nested association mapping population
journal, January 2011
- Tian, Feng; Bradbury, Peter J.; Brown, Patrick J.
- Nature Genetics, Vol. 43, Issue 2
Variability in the Control of Cell Division Underlies Sepal Epidermal Patterning in Arabidopsis thaliana
journal, May 2010
- Roeder, Adrienne H. K.; Chickarmane, Vijay; Cunha, Alexandre
- PLoS Biology, Vol. 8, Issue 5
Arabidopsis Lipins, PDAT1 Acyltransferase, and SDP1 Triacylglycerol Lipase Synergistically Direct Fatty Acids toward β-Oxidation, Thereby Maintaining Membrane Lipid Homeostasis
journal, October 2014
- Fan, Jilian; Yan, Chengshi; Roston, Rebecca
- The Plant Cell, Vol. 26, Issue 10
Reconstructing spatiotemporal gene expression data from partial observations
journal, July 2009
- Cartwright, D. A.; Brady, S. M.; Orlando, D. A.
- Bioinformatics, Vol. 25, Issue 19
The Development and Application of Optogenetics
journal, July 2011
- Fenno, Lief; Yizhar, Ofer; Deisseroth, Karl
- Annual Review of Neuroscience, Vol. 34, Issue 1
Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity
journal, September 2014
- Weirauch, Matthew T.; Yang, Ally; Albu, Mihai
- Cell, Vol. 158, Issue 6
SWEETs, transporters for intracellular and intercellular sugar translocation
journal, June 2015
- Eom, Joon-Seob; Chen, Li-Qing; Sosso, Davide
- Current Opinion in Plant Biology, Vol. 25
The Preservation of Plant Genetic Resources. Experiences with Arabidopsis
journal, November 2003
- Meinke, David; Scholl, Randy
- Plant Physiology, Vol. 133, Issue 3
Abscisic Acid: Emergence of a Core Signaling Network
journal, June 2010
- Cutler, Sean R.; Rodriguez, Pedro L.; Finkelstein, Ruth R.
- Annual Review of Plant Biology, Vol. 61, Issue 1
Auxin controls petal initiation in Arabidopsis
journal, November 2012
- Lampugnani, E. R.; Kilinc, A.; Smyth, D. R.
- Development, Vol. 140, Issue 1
Genome-Wide Association Studies Identify Heavy Metal ATPase3 as the Primary Determinant of Natural Variation in Leaf Cadmium in Arabidopsis thaliana
journal, September 2012
- Chao, Dai-Yin; Silva, Adriano; Baxter, Ivan
- PLoS Genetics, Vol. 8, Issue 9
Improving crop disease resistance: lessons from research on Arabidopsis and tomato
journal, December 2014
- Piquerez, Sophie J. M.; Harvey, Sarah E.; Beynon, Jim L.
- Frontiers in Plant Science, Vol. 5
Physical Forces Regulate Plant Development and Morphogenesis
journal, May 2014
- Sampathkumar, Arun; Yan, An; Krupinski, Pawel
- Current Biology, Vol. 24, Issue 10
Genetic analysis of ethylene signal transduction in Arabidopsis thaliana: five novel mutant loci integrated into a stress response pathway.
journal, March 1995
- Roman, G.; Lubarsky, B.; Kieber, J. J.
- Genetics, Vol. 139, Issue 3
High-frequency homologous recombination in plants mediated by zinc-finger nucleases
journal, October 2005
- Wright, David A.; Townsend, Jeffrey A.; Winfrey, Ronnie Joe
- The Plant Journal, Vol. 44, Issue 4, p. 693-705
Cloning and expression in yeast of a plant potassium ion transport system
journal, May 1992
- Sentenac, H.; Bonneaud, N.; Minet, M.
- Science, Vol. 256, Issue 5057
A Quantitative and Dynamic Model of the Arabidopsis Flowering Time Gene Regulatory Network
journal, February 2015
- Leal Valentim, Felipe; Mourik, Simon van; Posé, David
- PLOS ONE, Vol. 10, Issue 2
Development of an efficient two-element transposon tagging system in Arabidopsis thaliana
journal, June 1992
- Bancroft, Ian; Bhatt, Anuj M.; Sjodin, Christina
- Molecular and General Genetics MGG, Vol. 233, Issue 3
The TPLATE Adaptor Complex Drives Clathrin-Mediated Endocytosis in Plants
journal, February 2014
- Gadeyne, Astrid; Sánchez-Rodríguez, Clara; Vanneste, Steffen
- Cell, Vol. 156, Issue 4
Genes and networks regulating root anatomy and architecture
journal, May 2015
- Wachsman, Guy; Sparks, Erin E.; Benfey, Philip N.
- New Phytologist, Vol. 208, Issue 1
Characterization of an Arabidopsis Mutant That Is Nonresponsive to Inducers of Systemic Acquired Resistance.
journal, November 1994
- Cao, H.; Bowling, S. A.; Gordon, A. S.
- The Plant Cell
Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana
journal, June 2010
- Todesco, Marco; Balasubramanian, Sureshkumar; Hu, Tina T.
- Nature, Vol. 465, Issue 7298
Prehistory and History of Arabidopsis Research
journal, January 2001
- Meyerowitz, Elliot M.
- Plant Physiology, Vol. 125, Issue 1
Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm
journal, December 2011
- Huang, Xuehui; Zhao, Yan; Wei, Xinghua
- Nature Genetics, Vol. 44, Issue 1
Editorial overview: Plant morphogenesis—new understanding of its organization and evolution
journal, February 2014
- Smyth, David R.; Banks, Jo Ann
- Current Opinion in Plant Biology, Vol. 17
Molecular Basis of Plant Cold Acclimation: Insights Gained from Studying the CBF Cold Response Pathway: Figure 1.
journal, October 2010
- Thomashow, Michael F.
- Plant Physiology, Vol. 154, Issue 2
A comparison of population types used for QTL mapping in Arabidopsis thaliana
journal, March 2011
- Keurentjes, Joost J. B.; Willems, Glenda; van Eeuwijk, Fred
- Plant Genetic Resources, Vol. 9, Issue 2
Transcriptome Dynamics of the Stomatal Lineage: Birth, Amplification, and Termination of a Self-Renewing Population
journal, April 2015
- Adrian, Jessika; Chang, Jessica; Ballenger, Catherine E.
- Developmental Cell, Vol. 33, Issue 1
ZEITLUPE is a circadian photoreceptor stabilized by GIGANTEA in blue light
journal, August 2007
- Kim, Woe-Yeon; Fujiwara, Sumire; Suh, Sung-Suk
- Nature, Vol. 449, Issue 7160
The plant immune system
journal, November 2006
- Jones, Jonathan D. G.; Dangl, Jeffery L.
- Nature, Vol. 444, Issue 7117
Cell Identity Mediates the Response of Arabidopsis Roots to Abiotic Stress
journal, May 2008
- Dinneny, J. R.; Long, T. A.; Wang, J. Y.
- Science, Vol. 320, Issue 5878
Expression of the Pseudomonas syringae avirulence protein AvrB in plant cells alleviates its dependence on the hypersensitive response and pathogenicity (Hrp) secretion system in eliciting genotype-specific hypersensitive cell death.
journal, July 1996
- Gopalan, S.; Bauer, D. W.; Alfano, J. R.
- The Plant Cell, Vol. 8, Issue 7
A Reversible Photoreaction Controlling Seed Germination
journal, August 1952
- Borthwick, H. A.; Hendricks, S. B.; Parker, M. W.
- Proceedings of the National Academy of Sciences, Vol. 38, Issue 8
Sugar transporters for intercellular exchange and nutrition of pathogens
journal, November 2010
- Chen, Li-Qing; Hou, Bi-Huei; Lalonde, Sylvie
- Nature, Vol. 468, Issue 7323
Role of transposable elements in heterochromatin and epigenetic control
journal, July 2004
- Lippman, Zachary; Gendrel, Anne-Valérie; Black, Michael
- Nature, Vol. 430, Issue 6998
Starch turnover: pathways, regulation and role in growth
journal, June 2012
- Stitt, Mark; Zeeman, Samuel C.
- Current Opinion in Plant Biology, Vol. 15, Issue 3
The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses: The Botany Array Resource
journal, June 2005
- Toufighi, Kiana; Brady, Siobhan M.; Austin, Ryan
- The Plant Journal, Vol. 43, Issue 1
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence
journal, January 2013
- Péret, Benjamin; Middleton, Alistair M.; French, Andrew P.
- Molecular Systems Biology, Vol. 9, Issue 1
Isolation and characterization of a sucrose carrier cDNA from spinach by functional expression in yeast.
journal, December 1992
- Riesmeier, J. W.; Willmitzer, L.; Frommer, W. B.
- The EMBO Journal, Vol. 11, Issue 13
Quantitative Imaging with Fluorescent Biosensors
journal, June 2012
- Okumoto, Sakiko; Jones, Alexander; Frommer, Wolf B.
- Annual Review of Plant Biology, Vol. 63, Issue 1
Multigeneration analysis reveals the inheritance, specificity, and patterns of CRISPR/Cas-induced gene modifications in Arabidopsis
journal, February 2014
- Feng, Z.; Mao, Y.; Xu, N.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 12
The hexose carrier from Chlorella : cDNA cloning of a eucaryotic H
journal, December 1989
- Sauer, Norbert; Tanner, Widmar
- FEBS Letters, Vol. 259, Issue 1
ROS1, a Repressor of Transcriptional Gene Silencing in Arabidopsis, Encodes a DNA Glycosylase/Lyase
journal, December 2002
- Gong, Zhizhong; Morales-Ruiz, Teresa; Ariza, Rafael R.
- Cell, Vol. 111, Issue 6
GENEVESTIGATOR. Arabidopsis Microarray Database and Analysis Toolbox
journal, September 2004
- Zimmermann, Philip; Hirsch-Hoffmann, Matthias; Hennig, Lars
- Plant Physiology, Vol. 136, Issue 1
Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3
journal, September 2004
- Lindroth, Anders M.; Shultis, David; Jasencakova, Zuzana
- The EMBO Journal, Vol. 23, Issue 21
ABA perception and signalling
journal, July 2010
- Raghavendra, Agepati S.; Gonugunta, Vijay K.; Christmann, Alexander
- Trends in Plant Science, Vol. 15, Issue 7
RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes
journal, December 1994
- Bent, A. F.
- Trends in Genetics, Vol. 10, Issue 12, p. 421
Regulation of transcription in plants: mechanisms controlling developmental switches
journal, November 2010
- Kaufmann, Kerstin; Pajoro, Alice; Angenent, Gerco C.
- Nature Reviews Genetics, Vol. 11, Issue 12
A plasma membrane-bound putative endo-1,4-beta -D-glucanase is required for normal wall assembly and cell elongation in Arabidopsis
journal, October 1998
- Nicol, F.
- The EMBO Journal, Vol. 17, Issue 19
Mechanisms of Stomatal Development
journal, June 2012
- Pillitteri, Lynn Jo; Torii, Keiko U.
- Annual Review of Plant Biology, Vol. 63, Issue 1
Models of sequestration and receptor cross-talk for explaining multiple mutants in plant stem cell regulation
journal, January 2011
- Sahlin, Patrik; Melke, Pontus; Jönsson, Henrik
- BMC Systems Biology, Vol. 5, Issue 1
The growth–defense pivot: crisis management in plants mediated by LRR-RK surface receptors
journal, October 2014
- Belkhadir, Youssef; Yang, Li; Hetzel, Jonathan
- Trends in Biochemical Sciences, Vol. 39, Issue 10
Engineering the ABA Plant Stress Pathway for Regulation of Induced Proximity
journal, March 2011
- Liang, F. -S.; Ho, W. Q.; Crabtree, G. R.
- Science Signaling, Vol. 4, Issue 164
Metabolic Engineering of Seeds Can Achieve Levels of ω-7 Fatty Acids Comparable with the Highest Levels Found in Natural Plant Sources
journal, October 2010
- Nguyen, Huu Tam; Mishra, Girish; Whittle, Edward
- Plant Physiology, Vol. 154, Issue 4
Small Molecules Present Large Opportunities in Plant Biology
journal, June 2012
- Hicks, Glenn R.; Raikhel, Natasha V.
- Annual Review of Plant Biology, Vol. 63, Issue 1
Selective mRNA translation coordinates energetic and metabolic adjustments to cellular oxygen deprivation and reoxygenation in Arabidopsis thaliana
journal, December 2008
- Branco-Price, Cristina; Kaiser, Kayla A.; Jang, Charles J. H.
- The Plant Journal, Vol. 56, Issue 5
Root Systems Biology: Integrative Modeling across Scales, from Gene Regulatory Networks to the Rhizosphere
journal, October 2013
- Hill, K.; Porco, S.; Lobet, G.
- PLANT PHYSIOLOGY, Vol. 163, Issue 4
The long-term maintenance of a resistance polymorphism through diffuse interactions
journal, July 2014
- Karasov, Talia L.; Kniskern, Joel M.; Gao, Liping
- Nature, Vol. 512, Issue 7515
Principles for the Buffering of Genetic Variation
journal, February 2001
- Hartman IV, J. L.
- Science, Vol. 291, Issue 5506
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
journal, December 2000
- Arabidopsis Genome Initiative,
- Nature, Vol. 408, Issue 6814, p. 796-815
Next-generation mapping of Arabidopsis genes: Next-generation mapping of Arabidopsis genes
journal, July 2011
- Austin, Ryan S.; Vidaurre, Danielle; Stamatiou, George
- The Plant Journal, Vol. 67, Issue 4
Requirements for Arabidopsis ATARP2 and ATARP3 during Epidermal Development
journal, August 2003
- Le, Jie; El-Assal, Salah El-Din; Basu, Dipanwita
- Current Biology, Vol. 13, Issue 15
MorphoGraphX: A platform for quantifying morphogenesis in 4D
journal, May 2015
- Barbier de Reuille, Pierre; Routier-Kierzkowska, Anne-Lise; Kierzkowski, Daniel
- eLife, Vol. 4
An Arabidopsis gene regulatory network for secondary cell wall synthesis
journal, December 2014
- Taylor-Teeples, M.; Lin, L.; de Lucas, M.
- Nature, Vol. 517, Issue 7536
Growth Control and Cell Wall Signaling in Plants
journal, June 2012
- Wolf, Sebastian; Hématy, Kian; Höfte, Herman
- Annual Review of Plant Biology, Vol. 63, Issue 1
Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
journal, May 2008
- Lister, Ryan; O'Malley, Ronan C.; Tonti-Filippini, Julian
- Cell, Vol. 133, Issue 3
A Predicted Interactome for Arabidopsis
journal, August 2007
- Geisler-Lee, Jane; O'Toole, Nicholas; Ammar, Ron
- Plant Physiology, Vol. 145, Issue 2
Omics meet networks—using systems approaches to infer regulatory networks in plants
journal, April 2010
- Moreno-Risueno, Miguel A.; Busch, Wolfgang; Benfey, Philip N.
- Current Opinion in Plant Biology, Vol. 13, Issue 2
Arabidopsis AUX1 Gene: A Permease-Like Regulator of Root Gravitropism
journal, August 1996
- Bennett, M. J.; Marchant, A.; Green, H. G.
- Science, Vol. 273, Issue 5277
BAK1, an Arabidopsis LRR Receptor-like Protein Kinase, Interacts with BRI1 and Modulates Brassinosteroid Signaling
journal, July 2002
- Li, Jia; Wen, Jiangqi; Lease, Kevin A.
- Cell, Vol. 110, Issue 2
Structure and Functions of the Bacterial Microbiota of Plants
journal, April 2013
- Bulgarelli, Davide; Schlaeppi, Klaus; Spaepen, Stijn
- Annual Review of Plant Biology, Vol. 64, Issue 1
Arabidopsis ethylene-response gene ETR1: similarity of product to two-component regulators
journal, October 1993
- Chang, C.; Kwok, S.; Bleecker, A.
- Science, Vol. 262, Issue 5133
A Unified Model of Shoot Tropism in Plants: Photo-, Gravi- and Propio-ception
journal, February 2015
- Bastien, Renaud; Douady, Stéphane; Moulia, Bruno
- PLOS Computational Biology, Vol. 11, Issue 2
Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate
journal, April 2010
- Carlsbecker, Annelie; Lee, Ji-Young; Roberts, Christina J.
- Nature, Vol. 465, Issue 7296
Plant pathogens and integrated defence responses to infection
journal, June 2001
- Dangl, Jeffery L.; Jones, Jonathan D. G.
- Nature, Vol. 411, Issue 6839
Agrobacterium-mediated transformation of germinating seeds of Arabidopsis thaliana: A non-tissue culture approach
journal, June 1987
- Feldmann, Kenneth A.; David Marks, M.
- Molecular and General Genetics MGG, Vol. 208, Issue 1-2
Epigenetic Regulation in Plants
journal, December 2014
- Pikaard, C. S.; Mittelsten Scheid, O.
- Cold Spring Harbor Perspectives in Biology, Vol. 6, Issue 12
The Cell Biology of Cellulose Synthesis
journal, April 2014
- McFarlane, Heather E.; Döring, Anett; Persson, Staffan
- Annual Review of Plant Biology, Vol. 65, Issue 1
Isolation and characterization of powdery mildew-resistant Arabidopsis mutants
journal, February 2000
- Vogel, J.; Somerville, S.
- Proceedings of the National Academy of Sciences, Vol. 97, Issue 4
Arabidopsis Is Susceptible to Infection by a Downy Mildew Fungus
journal, May 1990
- Koch, Eckhard; Slusarenko, Alan
- The Plant Cell, Vol. 2, Issue 5
New frontiers in oilseed biotechnology: meeting the global demand for vegetable oils for food, feed, biofuel, and industrial applications
journal, April 2011
- Lu, Chaofu; Napier, Johnathan A.; Clemente, Thomas E.
- Current Opinion in Biotechnology, Vol. 22, Issue 2
Activation of protein splicing with light in yeast
journal, February 2008
- Tyszkiewicz, Amy B.; Muir, Tom W.
- Nature Methods, Vol. 5, Issue 4
A light-switchable gene promoter system
journal, September 2002
- Shimizu-Sato, Sae; Huq, Enamul; Tepperman, James M.
- Nature Biotechnology, Vol. 20, Issue 10
O-Glycosylated Cell Wall Proteins Are Essential in Root Hair Growth
journal, June 2011
- Velasquez, S. M.; Ricardi, M. M.; Dorosz, J. G.
- Science, Vol. 332, Issue 6036
Quantification of cell identity from single-cell gene expression profiles
journal, January 2015
- Efroni, Idan; Ip, Pui-Leng; Nawy, Tal
- Genome Biology, Vol. 16, Issue 1
Identification of CRE1 as a cytokinin receptor from Arabidopsis
journal, February 2001
- Inoue, Tsutomu; Higuchi, Masayuki; Hashimoto, Yukari
- Nature, Vol. 409, Issue 6823
The war of the whorls: genetic interactions controlling flower development
journal, September 1991
- Coen, Enrico S.; Meyerowitz, Elliot M.
- Nature, Vol. 353, Issue 6339
Adaptation to Climate Across the Arabidopsis thaliana Genome
journal, October 2011
- Hancock, A. M.; Brachi, B.; Faure, N.
- Science, Vol. 334, Issue 6052
Using membrane transporters to improve crops for sustainable food production
journal, May 2013
- Schroeder, Julian I.; Delhaize, Emmanuel; Frommer, Wolf B.
- Nature, Vol. 497, Issue 7447
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis: Organization of the Arabidopsis epigenome
journal, April 2011
- Roudier, François; Ahmed, Ikhlak; Bérard, Caroline
- The EMBO Journal, Vol. 30, Issue 10
Mutations in Actin-Related Proteins 2 and 3 Affect Cell Shape Development in Arabidopsis
journal, June 2003
- Mathur, Jaideep; Mathur, Neeta; Kernebeck, Birgit
- The Plant Cell, Vol. 15, Issue 7
Gene Ontology: tool for the unification of biology
journal, May 2000
- Ashburner, Michael; Ball, Catherine A.; Blake, Judith A.
- Nature Genetics, Vol. 25, Issue 1
Large-Scale Discovery of Induced Point Mutations With High-Throughput TILLING
journal, March 2003
- Till, B. J.
- Genome Research, Vol. 13, Issue 3
LACCASE Is Necessary and Nonredundant with PEROXIDASE for Lignin Polymerization during Vascular Development in Arabidopsis
journal, October 2013
- Zhao, Qiao; Nakashima, Jin; Chen, Fang
- The Plant Cell, Vol. 25, Issue 10
Epigenetic inheritance in plants
journal, May 2007
- Henderson, Ian R.; Jacobsen, Steven E.
- Nature, Vol. 447, Issue 7143
The tomato FT ortholog triggers systemic signals that regulate growth and flowering and substitute for diverse environmental stimuli
journal, April 2006
- Lifschitz, E.; Eviatar, T.; Rozman, A.
- Proceedings of the National Academy of Sciences, Vol. 103, Issue 16
Natural Variants of AtHKT1 Enhance Na+ Accumulation in Two Wild Populations of Arabidopsis
journal, January 2006
- Rus, Ana; Baxter, Ivan; Muthukumar, Balasubramaniam
- PLoS Genetics, Vol. 2, Issue 12
Dwarf8 polymorphisms associate with variation in flowering time
journal, July 2001
- Thornsberry, Jeffry M.; Goodman, Major M.; Doebley, John
- Nature Genetics, Vol. 28, Issue 3
Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis
journal, June 2013
- Chang, Katherine Noelani; Zhong, Shan; Weirauch, Matthew T.
- eLife, Vol. 2
The development of Arabidopsis as a model plant
journal, March 2010
- Koornneef, Maarten; Meinke, David
- The Plant Journal, Vol. 61, Issue 6
Genome-wide association study using cellular traits identifies a new regulator of root development in Arabidopsis
journal, November 2013
- Meijón, Mónica; Satbhai, Santosh B.; Tsuchimatsu, Takashi
- Nature Genetics, Vol. 46, Issue 1
The A. thaliana disease resistance gene RPS2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats
journal, September 1994
- Mindrinos, Michael; Katagiri, Fumiaki; Yu, Guo-Liang
- Cell, Vol. 78, Issue 6
Control of Pollen Tube Tip Growth by a Rop GTPase-Dependent Pathway That Leads to Tip-Localized Calcium Influx
journal, September 1999
- Li, Hai; Lin, Yakang; Heath, Rachel M.
- The Plant Cell, Vol. 11, Issue 9
Generation of Spatial Patterns Through Cell Polarity Switching
journal, September 2011
- Robinson, S.; Barbier de Reuille, P.; Chan, J.
- Science, Vol. 333, Issue 6048
Control of Pollen Tube Tip Growth by a Rop GTPase–Dependent Pathway That Leads to Tip-Localized Calcium Influx
journal, September 1999
- Li, Hai; Lin, Yakang; Heath, Rachel M.
- The Plant Cell, Vol. 11, Issue 9
Plant single-cell and single-cell-type metabolomics
journal, October 2014
- Misra, Biswapriya B.; Assmann, Sarah M.; Chen, Sixue
- Trends in Plant Science, Vol. 19, Issue 10
Mutations in Multiple XXT Genes of Arabidopsis Reveal the Complexity of Xyloglucan Biosynthesis
journal, June 2012
- Zabotina, Olga A.; Avci, Utku; Cavalier, David
- Plant Physiology, Vol. 159, Issue 4
An Arabidopsis Example of Association Mapping in Structured Samples
journal, January 2007
- Zhao, Keyan; Aranzana, María José; Kim, Sung
- PLoS Genetics, Vol. 3, Issue 1
Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel
journal, January 2012
- Horton, Matthew W.; Hancock, Angela M.; Huang, Yu S.
- Nature Genetics, Vol. 44, Issue 2
Recapitulation of the forward nuclear auxin response pathway in yeast
journal, June 2014
- Pierre-Jerome, Edith; Jang, Seunghee S.; Havens, Kyle A.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 26
Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3
journal, May 2011
- Lindroth, Anders M.; Shultis, David; Jasencakova, Zuzana
- The EMBO Journal, Vol. 30, Issue 9
A mixed-model approach for genome-wide association studies of correlated traits in structured populations
journal, August 2012
- Korte, Arthur; Vilhjálmsson, Bjarni J.; Segura, Vincent
- Nature Genetics, Vol. 44, Issue 9
DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data
journal, January 2012
- Schulz, Marcel H.; Devanny, William E.; Gitter, Anthony
- BMC Systems Biology, Vol. 6, Issue 1
Starch in the Arabidopsis plant
journal, February 2012
- Smith, Alison M.
- Starch - Stärke, Vol. 64, Issue 6
Potato sucrose transporter expression in minor veins indicates a role in phloem loading.
journal, November 1993
- Riesmeier, J. W.; Hirner, B.; Frommer, W. B.
- The Plant Cell, Vol. 5, Issue 11
CHD3 Proteins and Polycomb Group Proteins Antagonistically Determine Cell Identity in Arabidopsis
journal, August 2009
- Aichinger, Ernst; Villar, Corina B. R.; Farrona, Sara
- PLoS Genetics, Vol. 5, Issue 8
An auxin-based degron system for the rapid depletion of proteins in nonplant cells
journal, November 2009
- Nishimura, Kohei; Fukagawa, Tatsuo; Takisawa, Haruhiko
- Nature Methods, Vol. 6, Issue 12
A Functional and Evolutionary Perspective on Transcription Factor Binding in Arabidopsis thaliana
journal, October 2014
- Heyndrickx, Ken S.; de Velde, Jan Van; Wang, Congmao
- The Plant Cell, Vol. 26, Issue 10
Global Mapping of the Yeast Genetic Interaction Network
journal, February 2004
- Tong, A. H. Y.
- Science, Vol. 303, Issue 5659
Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana
journal, January 2010
- Lee, Insuk; Ambaru, Bindu; Thakkar, Pranjali
- Nature Biotechnology, Vol. 28, Issue 2
Potato Sucrose Transporter Expression in Minor Veins Indicates a Role in Phloem Loading
journal, November 1993
- Riesmeier, Jorg W.; Hirner, Brigitte; Frommer, Wolf B.
- The Plant Cell, Vol. 5, Issue 11
Interlocking Feedback Loops Govern the Dynamic Behavior of the Floral Transition in Arabidopsis
journal, March 2013
- Jaeger, Katja E.; Pullen, Nick; Lamzin, Sergey
- The Plant Cell, Vol. 25, Issue 3
The Impact of Arabidopsis on Human Health: Diversifying Our Portfolio
journal, June 2008
- Jones, Alan M.; Chory, Joanne; Dangl, Jeffery L.
- Cell, Vol. 133, Issue 6
From plant gene regulatory grids to network dynamics
journal, May 2012
- Mejia-Guerra, Maria Katherine; Pomeranz, Marcelo; Morohashi, Kengo
- Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. 1819, Issue 5
Plant members of a family of sulfate transporters reveal functional subtypes.
journal, September 1995
- Smith, F. W.; Ealing, P. M.; Hawkesford, M. J.
- Proceedings of the National Academy of Sciences, Vol. 92, Issue 20
A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
journal, December 2005
- Yu, Jianming; Pressoir, Gael; Briggs, William H.
- Nature Genetics, Vol. 38, Issue 2
Analysis of cloned cDNA and genomic sequences for phaytochrome: complete amino acid sequences for two gene products expressed in etiolated Avena
journal, January 1985
- Hershey, Howard P.; Barker, Richard F.; Idler, Kenneth B.
- Nucleic Acids Research, Vol. 13, Issue 23
From Laboratory to Field. Using Information from Arabidopsis to Engineer Salt, Cold, and Drought Tolerance in Crops
journal, June 2004
- Zhang, James Z.; Creelman, Robert A.; Zhu, Jian-Kang
- Plant Physiology, Vol. 135, Issue 2
FT Protein Movement Contributes to Long-Distance Signaling in Floral Induction of Arabidopsis
journal, May 2007
- Corbesier, L.; Vincent, C.; Jang, S.
- Science, Vol. 316, Issue 5827
Hd3a Protein Is a Mobile Flowering Signal in Rice
journal, May 2007
- Tamaki, S.; Matsuo, S.; Wong, H. L.
- Science, Vol. 316, Issue 5827
Web-Queryable Large-Scale Data Sets for Hypothesis Generation in Plant Biology
journal, April 2009
- Brady, Siobhan M.; Provart, Nicholas J.
- The Plant Cell, Vol. 21, Issue 4
Gene networks controlling Arabidopsis thaliana flower development
journal, August 2013
- Ó'Maoiléidigh, Diarmuid Seosamh; Graciet, Emmanuelle; Wellmer, Frank
- New Phytologist, Vol. 201, Issue 1
Recombination and linkage disequilibrium in Arabidopsis thaliana
journal, August 2007
- Kim, Sung; Plagnol, Vincent; Hu, Tina T.
- Nature Genetics, Vol. 39, Issue 9
Arabidopsis NPH1: A Flavoprotein with the Properties of a Photoreceptor for Phototropism
journal, November 1998
- Christie, J. M.
- Science, Vol. 282, Issue 5394
Disruption of Mediator rescues the stunted growth of a lignin-deficient Arabidopsis mutant
journal, March 2014
- Bonawitz, Nicholas D.; Kim, Jeong Im; Tobimatsu, Yuki
- Nature, Vol. 509, Issue 7500, p. 376-380
The significance of responses of the genome to challenge
journal, November 1984
- McClintock, B.
- Science, Vol. 226, Issue 4676
SWI2/SNF2 chromatin remodeling ATPases overcome polycomb repression and control floral organ identity with the LEAFY and SEPALLATA3 transcription factors
journal, February 2012
- Wu, M. -F.; Sang, Y.; Bezhani, S.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 9
Nectar secretion requires sucrose phosphate synthases and the sugar transporter SWEET9
journal, March 2014
- Lin, I. Winnie; Sosso, Davide; Chen, Li-Qing
- Nature, Vol. 508, Issue 7497
Plant-Specific Microtubule-Associated Protein SPIRAL2 Is Required for Anisotropic Growth in Arabidopsis
journal, November 2004
- Shoji, Tsubasa; Narita, Noriyuki N.; Hayashi, Kazunori
- Plant Physiology, Vol. 136, Issue 4
The triose phosphate-3-phosphoglycerate-phosphate translocator from spinach chloroplasts: nucleotide sequence of a full-length cDNA clone and import of the in vitro synthesized precursor protein into chloroplasts.
journal, January 1989
- Flügge, U. I.; Fischer, K.; Gross, A.
- The EMBO Journal, Vol. 8, Issue 1
Physiological and developmental regulation of seed oil production
journal, July 2010
- Baud, Sébastien; Lepiniec, Loïc
- Progress in Lipid Research, Vol. 49, Issue 3
Cloning a plant amino acid transporter by functional complementation of a yeast amino acid transport mutant.
journal, August 1993
- Hsu, L. C.; Chiou, T. J.; Chen, L.
- Proceedings of the National Academy of Sciences, Vol. 90, Issue 16
Perception of UV-B by the Arabidopsis UVR8 Protein
journal, March 2011
- Rizzini, L.; Favory, J. -J.; Cloix, C.
- Science, Vol. 332, Issue 6025
Functional expression of a probable Arabidopsis thaliana potassium channel in Saccharomyces cerevisiae.
journal, May 1992
- Anderson, J. A.; Huprikar, S. S.; Kochian, L. V.
- Proceedings of the National Academy of Sciences, Vol. 89, Issue 9
A Systems Approach Reveals Regulatory Circuitry for Arabidopsis Trichome Initiation by the GL3 and GL1 Selectors
journal, February 2009
- Morohashi, Kengo; Grotewold, Erich
- PLoS Genetics, Vol. 5, Issue 2
What Has Natural Variation Taught Us about Plant Development, Physiology, and Adaptation?
journal, July 2009
- Alonso-Blanco, Carlos; Aarts, Mark G. M.; Bentsink, Leonie
- The Plant Cell, Vol. 21, Issue 7
PROTEIN TARGETING TO STARCH Is Required for Localising GRANULE-BOUND STARCH SYNTHASE to Starch Granules and for Normal Amylose Synthesis in Arabidopsis
journal, February 2015
- Seung, David; Soyk, Sebastian; Coiro, Mario
- PLOS Biology, Vol. 13, Issue 2
HY4 gene of A. thaliana encodes a protein with characteristics of a blue-light photoreceptor
journal, November 1993
- Ahmad, Margaret; Cashmore, Anthony R.
- Nature, Vol. 366, Issue 6451
Lipid biochemists salute the genome
journal, March 2010
- Wallis, James G.; Browse, John
- The Plant Journal, Vol. 61, Issue 6
Araport: the Arabidopsis Information Portal
journal, November 2014
- Krishnakumar, Vivek; Hanlon, Matthew R.; Contrino, Sergio
- Nucleic Acids Research, Vol. 43, Issue D1
Molecular Analysis of Cellulose Biosynthesis in Arabidopsis
journal, January 1998
- Arioli, Tony; Peng, Liangcai; Betzner, Andreas S.
- Science, Vol. 279, Issue 5351
The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors
journal, July 1990
- Yanofsky, Martin F.; Ma, Hong; Bowman, John L.
- Nature, Vol. 346, Issue 6279
Deficiens, a homeotic gene involved in the control of flower morphogenesis in Antirrhinum majus: the protein shows homology to transcription factors.
journal, March 1990
- Sommer, H.; Beltrán, J. P.; Huijser, P.
- The EMBO Journal, Vol. 9, Issue 3
KOJAK encodes a cellulose synthase-like protein required for root hair cell morphogenesis in Arabidopsis
journal, January 2001
- Favery, B.
- Genes & Development, Vol. 15, Issue 1
Targeting metabolic pathways for genetic engineering abiotic stress-tolerance in crops
journal, February 2012
- Reguera, Maria; Peleg, Zvi; Blumwald, Eduardo
- Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. 1819, Issue 2
In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features
journal, November 2013
- Ding, Yiliang; Tang, Yin; Kwok, Chun Kit
- Nature, Vol. 505, Issue 7485
A Polycomb-group gene regulates homeotic gene expression in Arabidopsis
journal, March 1997
- Goodrich, Justin; Puangsomlee, Preeya; Martin, Marta
- Nature, Vol. 386, Issue 6620
Brachypodium as a Model for the Grasses: Today and the Future
journal, July 2011
- Brkljacic, Jelena; Grotewold, Erich; Scholl, Randy
- Plant Physiology, Vol. 157, Issue 1
Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana
text, January 2010
- Yu, Huang,; L., Dangl, Jeffery; Sridevi, Sureshkumar,
- The University of North Carolina at Chapel Hill University Libraries
DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation
journal, May 2015
- Dubin, Manu J.; Zhang, Pei; Meng, Dazhe
- eLife, Vol. 4
The ABCs of floral homeotic genes
journal, July 1994
- Weigel, Detlef; Meyerowitz, Elliot M.
- Cell, Vol. 78, Issue 2
Green systems biology — From single genomes, proteomes and metabolomes to ecosystems research and biotechnology
journal, December 2011
- Weckwerth, Wolfram
- Journal of Proteomics, Vol. 75, Issue 1
A PINOID-Dependent Binary Switch in Apical-Basal PIN Polar Targeting Directs Auxin Efflux
journal, October 2004
- Friml, J.
- Science, Vol. 306, Issue 5697
Peptide Signaling in Plant Development
journal, May 2011
- Katsir, Leron; Davies, Kelli A.; Bergmann, Dominique C.
- Current Biology, Vol. 21, Issue 9
Genetic and Genomic Toolbox of Zea mays
journal, March 2015
- Nannas, Natalie J.; Dawe, R. Kelly
- Genetics, Vol. 199, Issue 3
Fluorescent sensors reporting the activity of ammonium transceptors in live cells
journal, July 2013
- De Michele, Roberto; Ast, Cindy; Loqué, Dominique
- eLife, Vol. 2
Molecular recognition of pathogen attack occurs inside of plant cells in plant disease resistance specified by the Arabidopsis genes RPS2 and RPM1
journal, December 1996
- Leister, R. T.; Ausubel, F. M.; Katagiri, F.
- Proceedings of the National Academy of Sciences, Vol. 93, Issue 26
Predicting Essential Components of Signal Transduction Networks: A Dynamic Model of Guard Cell Abscisic Acid Signaling
journal, September 2006
- Li, Song; Assmann, Sarah M.; Albert, Réka
- PLoS Biology, Vol. 4, Issue 10
RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes
journal, September 1994
- Bent, A.; Kunkel, B.; Dahlbeck, D.
- Science, Vol. 265, Issue 5180
A Putative Leucine-Rich Repeat Receptor Kinase Involved in Brassinosteroid Signal Transduction
journal, September 1997
- Li, Jianming; Chory, Joanne
- Cell, Vol. 90, Issue 5
Modelling the role of microtubules in plant cell morphology
journal, December 2013
- Deinum, Eva E.; Mulder, Bela M.
- Current Opinion in Plant Biology, Vol. 16, Issue 6
Structure of the Arabidopsis RPM1 gene enabling dual specificity disease resistance
journal, August 1995
- Grant, M.; Godiard, L.; Straube, E.
- Science, Vol. 269, Issue 5225
CHD3 proteins and polycomb group proteins antagonistically determine cell identity in arabidopsis
text, January 2009
- Aichinger, Ernst; Villar, Corina B. R.; Farrona, Sara
- ETH Zurich
The Pattern of Polymorphism in Arabidopsis thaliana
journal, May 2005
- Nordborg, Magnus; Hu, Tina T.; Ishino, Yoko
- PLoS Biology, Vol. 3, Issue 7
An “Electronic Fluorescent Pictograph” Browser for Exploring and Analyzing Large-Scale Biological Data Sets
journal, August 2007
- Winter, Debbie; Vinegar, Ben; Nahal, Hardeep
- PLoS ONE, Vol. 2, Issue 8
The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses: AtGenExpress global abiotic stress data set
journal, March 2007
- Kilian, Joachim; Whitehead, Dion; Horak, Jakub
- The Plant Journal, Vol. 50, Issue 2
Alignment between PIN1 Polarity and Microtubule Orientation in the Shoot Apical Meristem Reveals a Tight Coupling between Morphogenesis and Auxin Transport
journal, October 2010
- Heisler, Marcus G.; Hamant, Olivier; Krupinski, Pawel
- PLoS Biology, Vol. 8, Issue 10
The Histone Variant H2A.W Defines Heterochromatin and Promotes Chromatin Condensation in Arabidopsis
journal, July 2014
- Yelagandula, Ramesh; Stroud, Hume; Holec, Sarah
- Cell, Vol. 158, Issue 1
Highly Specific Gene Silencing by Artificial MicroRNAs in Arabidopsis
journal, March 2006
- Schwab, Rebecca; Ossowski, Stephan; Riester, Markus
- The Plant Cell, Vol. 18, Issue 5
A CLASP-modulated cell edge barrier mechanism drives cell-wide cortical microtubule organization in Arabidopsis
journal, August 2011
- Ambrose, Chris; Allard, Jun F.; Cytrynbaum, Eric N.
- Nature Communications, Vol. 2, Issue 1
Current Status of the Gene-For-Gene Concept
journal, September 1971
- Flor, H. H.
- Annual Review of Phytopathology, Vol. 9, Issue 1
Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1
journal, March 2008
- Gutierrez, R. A.; Stokes, T. L.; Thum, K.
- Proceedings of the National Academy of Sciences, Vol. 105, Issue 12
Acyl-Lipid Metabolism
journal, January 2013
- Li-Beisson, Yonghua; Shorrosh, Basil; Beisson, Fred
- The Arabidopsis Book, Vol. 11
Arabidopsis thaliana and Plant Molecular Genetics
journal, September 1985
- Meyerowitz, E. M.; Pruitt, R. E.
- Science, Vol. 229, Issue 4719
Remembering the Prolonged Cold of Winter
journal, September 2013
- Song, Jie; Irwin, Judith; Dean, Caroline
- Current Biology, Vol. 23, Issue 17
Identification of the transporter responsible for sucrose accumulation in sugar beet taproots
journal, January 2015
- Jung, Benjamin; Ludewig, Frank; Schulz, Alexander
- Nature Plants, Vol. 1, Issue 1
Regulation of Cell Proliferation in the Stomatal Lineage by the Arabidopsis MYB FOUR LIPS via Direct Targeting of Core Cell Cycle Genes
journal, July 2010
- Xie, Zidian; Lee, EunKyoung; Lucas, Jessica R.
- The Plant Cell, Vol. 22, Issue 7
PROTEIN TARGETING TO STARCH Is Required for Localising GRANULE-BOUND STARCH SYNTHASE to Starch Granules and for Normal Amylose Synthesis in Arabidopsis
text, January 2015
- Zeeman, Samuel C.; Seung, David; Soyk, Sebastian
- ETH Zurich
Phototropism: Some History, Some Puzzles, and a Look Ahead
journal, January 2014
- Briggs, W. R.
- PLANT PHYSIOLOGY, Vol. 164, Issue 1
Arabidopsis is susceptible to infection by a downy mildew fungus.
journal, May 1990
- Koch, E.; Slusarenko, A.
- The Plant Cell, Vol. 2, Issue 5
Digital Single-Cell Analysis of Plant Organ Development Using 3DCellAtlas
journal, April 2015
- Montenegro-Johnson, Thomas D.; Stamm, Petra; Strauss, Soeren
- The Plant Cell, Vol. 27, Issue 4
Agrochemical control of plant water use using engineered abscisic acid receptors
journal, February 2015
- Park, Sang-Youl; Peterson, Francis C.; Mosquna, Assaf
- Nature, Vol. 520, Issue 7548
AtDB, the Arabidopsis thaliana database, and graphical-web-display of progress by the Arabidopsis Genome Initiative
journal, January 1998
- Flanders, D.
- Nucleic Acids Research, Vol. 26, Issue 1
SUC1 and SUC2: two sucrose transporters from Arabidopsis thaliana; expression and characterization in baker's yeast and identification of the histidine-tagged protein
journal, July 1994
- Sauer, Norbert; Stolz, Jurgen
- The Plant Journal, Vol. 6, Issue 1
Isolation and Sequence of Tryptic Peptides from the Proton-Pumping ATPase of the Oat Plasma Membrane
journal, February 1988
- Schaller, G. Eric; Sussman, Michael R.
- Plant Physiology, Vol. 86, Issue 2
Taking the Next Step: Building an Arabidopsis Information Portal
journal, July 2012
- International Arabidopsis Informatics Consortium,
- The Plant Cell, Vol. 24, Issue 6, p. 2248-2256
Genetic Perturbation of the Maize Methylome
journal, December 2014
- Li, Qing; Eichten, Steven R.; Hermanson, Peter J.
- The Plant Cell, Vol. 26, Issue 12
Use of infrared thermal imaging to isolate Arabidopsis mutants defective in stomatal regulation
journal, June 2002
- Merlot, Sylvain; Mustilli, Anna-Chiara; Genty, Bernard
- The Plant Journal, Vol. 30, Issue 5
A Gene Expression Map of the Arabidopsis Root
journal, December 2003
- Birnbaum, K.
- Science, Vol. 302, Issue 5652
The SRA Methyl-Cytosine-Binding Domain Links DNA and Histone Methylation
journal, February 2007
- Johnson, Lianna M.; Bostick, Magnolia; Zhang, Xiaoyu
- Current Biology, Vol. 17, Issue 4
Plant Nuclear Hormone Receptors: A Role for Small Molecules in Protein-Protein Interactions
journal, November 2010
- Lumba, Shelley; Cutler, Sean; McCourt, Peter
- Annual Review of Cell and Developmental Biology, Vol. 26, Issue 1
Characterization of an Arabidopsis Mutant That Is Nonresponsive to Inducers of Systemic Acquired Resistance
journal, November 1994
- Cao, Hui; Bowling, Scott A.; Gordon, A. Susan
- The Plant Cell, Vol. 6, Issue 11
The second wave of synthetic biology: from modules to systems
journal, June 2009
- Purnick, Priscilla E. M.; Weiss, Ron
- Nature Reviews Molecular Cell Biology, Vol. 10, Issue 6
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning
journal, February 2008
- Cokus, Shawn J.; Feng, Suhua; Zhang, Xiaoyu
- Nature, Vol. 452, Issue 7184
Target Genes of the MADS Transcription Factor SEPALLATA3: Integration of Developmental and Hormonal Pathways in the Arabidopsis Flower
journal, April 2009
- Kaufmann, Kerstin; Muiño, Jose M.; Jauregui, Ruy
- PLoS Biology, Vol. 7, Issue 4
Integration of Spatial and Temporal Information During Floral Induction in Arabidopsis
journal, August 2005
- Wigge, P. A.
- Science, Vol. 309, Issue 5737
Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
journal, December 1998
- Clough, Steven J.; Bent, Andrew F.
- The Plant Journal, Vol. 16, Issue 6, p. 735-743
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
journal, March 2010
- Atwell, Susanna; Huang, Yu S.; Vilhjálmsson, Bjarni J.
- Nature, Vol. 465, Issue 7298
Vernalization requires epigenetic silencing of FLC by histone methylation
journal, January 2004
- Bastow, Ruth; Mylne, Joshua S.; Lister, Clare
- Nature, Vol. 427, Issue 6970
Timing Mechanism Dependent on Cell Division Is Invoked by Polycomb Eviction in Plant Stem Cells
journal, January 2014
- Sun, B.; Looi, L. -S.; Guo, S.
- Science, Vol. 343, Issue 6170
In vivo genome editing using a high-efficiency TALEN system
journal, September 2012
- Bedell, Victoria M.; Wang, Ying; Campbell, Jarryd M.
- Nature, Vol. 491, Issue 7422
A Map of Local Adaptation in Arabidopsis thaliana
journal, October 2011
- Fournier-Level, A.; Korte, A.; Cooper, M. D.
- Science, Vol. 334, Issue 6052
The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant
journal, January 2001
- Huala, E.
- Nucleic Acids Research, Vol. 29, Issue 1
A Bistable Circuit Involving SCARECROW-RETINOBLASTOMA Integrates Cues to Inform Asymmetric Stem Cell Division
journal, August 2012
- Cruz-Ramírez, Alfredo; Díaz-Triviño, Sara; Blilou, Ikram
- Cell, Vol. 150, Issue 5
Identification of transferred DNA insertions within Arabidopsis genes involved in signal transduction and ion transport.
journal, July 1996
- Krysan, P. J.; Young, J. C.; Tax, F.
- Proceedings of the National Academy of Sciences, Vol. 93, Issue 15
Whole-genome sequencing of multiple Arabidopsis thaliana populations
journal, August 2011
- Cao, Jun; Schneeberger, Korbinian; Ossowski, Stephan
- Nature Genetics, Vol. 43, Issue 10
High-efficiency TALEN-based gene editing produces disease-resistant rice
journal, May 2012
- Li, Ting; Liu, Bo; Spalding, Martin H.
- Nature Biotechnology, Vol. 30, Issue 5
Versatile Gene-Specific Sequence Tags for Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications
journal, October 2004
- Hilson, P.
- Genome Research, Vol. 14, Issue 10b
Control of Starch Granule Numbers in Arabidopsis Chloroplasts
journal, December 2011
- Crumpton-Taylor, Matilda; Grandison, Scott; Png, Kenneth M. Y.
- Plant Physiology, Vol. 158, Issue 2
A Cascade of Sequentially Expressed Sucrose Transporters in the Seed Coat and Endosperm Provides Nutrition for the Arabidopsis Embryo
journal, March 2015
- Chen, Li-Qing; Lin, I. Winnie; Qu, Xiao-Qing
- The Plant Cell, Vol. 27, Issue 3
Arabidopsis as a Genetic Tool
journal, December 1975
- Redei, G. P.
- Annual Review of Genetics, Vol. 9, Issue 1
A protocol for TILLING and Ecotilling in plants and animals
journal, December 2006
- Till, Bradley J.; Zerr, Troy; Comai, Luca
- Nature Protocols, Vol. 1, Issue 5
Regulation of Polar Auxin Transport by AtPIN1 in Arabidopsis Vascular Tissue
journal, December 1998
- Ga lweiler, L.; Guan, C.; Mu ller, A.
- Science, Vol. 282, Issue 5397
Natural Variation in Abiotic Stress and Climate Change Responses in Arabidopsis : Implications for Twenty-First-Century Agriculture
journal, January 2013
- Assmann, Sarah M.
- International Journal of Plant Sciences, Vol. 174, Issue 1
Micrographia, or, Some physiological descriptions of minute bodies made by magnifying glasses : with observations and inquiries thereupon /
null, January 1665
- Hooke, Robert; Allestry, James; Martyn, John
- Printed by Jo. Martyn and Ja. Allestry, Printers to the Royal Society, and are to be sold at their shop at the bell in S. Paul's Church-yeard,
Plant sphingolipids: function follows form
journal, June 2013
- Markham, Jonathan E.; Lynch, Daniel V.; Napier, Johnathan A.
- Current Opinion in Plant Biology, Vol. 16, Issue 3
Bioinformatic Tools in Arabidopsis Research
book, January 2013
- de Lucas, Miguel; Provart, Nicholas J.; Brady, Siobhan M.
- Methods in Molecular Biology
Microbial life in the phyllosphere
journal, November 2012
- Vorholt, Julia A.
- Nature Reviews Microbiology, Vol. 10, Issue 12
Structure of a Plasma Membrane H+-ATPase Gene from the Plant Arabidopsis thaliana
journal, May 1989
- Pardo, J. M.; Serrano, R.
- Journal of Biological Chemistry, Vol. 264, Issue 15
Common Sequence Polymorphisms Shaping Genetic Diversity in Arabidopsis thaliana
journal, July 2007
- Clark, R. M.; Schweikert, G.; Toomajian, C.
- Science, Vol. 317, Issue 5836
Flowering Locus C’s Lessons: Conserved Chromatin Switches Underpinning Developmental Timing and Adaptation
journal, July 2015
- Hepworth, Jo; Dean, Caroline
- Plant Physiology, Vol. 168, Issue 4
Independently Evolved Virulence Effectors Converge onto Hubs in a Plant Immune System Network
journal, July 2011
- Mukhtar, M. S.; Carvunis, A. -R.; Dreze, M.
- Science, Vol. 333, Issue 6042
Divergent functions of VTI12 and VTI11 in trafficking to storage and lytic vacuoles in Arabidopsis
journal, February 2007
- Sanmartin, M.; Ordonez, A.; Sohn, E. J.
- Proceedings of the National Academy of Sciences, Vol. 104, Issue 9
A Coastal Cline in Sodium Accumulation in Arabidopsis thaliana Is Driven by Natural Variation of the Sodium Transporter AtHKT1;1
journal, November 2010
- Baxter, Ivan; Brazelton, Jessica N.; Yu, Danni
- PLoS Genetics, Vol. 6, Issue 11
Multiple reference genomes and transcriptomes for Arabidopsis thaliana
journal, August 2011
- Gan, Xiangchao; Stegle, Oliver; Behr, Jonas
- Nature, Vol. 477, Issue 7365
A High-Throughput Arabidopsis Reverse Genetics System
journal, November 2002
- Sessions, Allen; Burke, Ellen; Presting, Gernot
- The Plant Cell, Vol. 14, Issue 12
Extra-Large G Proteins Expand the Repertoire of Subunits in Arabidopsis Heterotrimeric G Protein Signaling
journal, July 2015
- Chakravorty, David; Gookin, Timothy E.; Milner, Matthew J.
- Plant Physiology, Vol. 169, Issue 1
BASL Controls Asymmetric Cell Division in Arabidopsis
journal, June 2009
- Dong, Juan; MacAlister, Cora A.; Bergmann, Dominique C.
- Cell, Vol. 137, Issue 7
Expression cloning in yeast of a cDNA encoding a broad specificity amino acid permease from Arabidopsis thaliana.
journal, July 1993
- Frommer, W. B.; Hummel, S.; Riesmeier, J. W.
- Proceedings of the National Academy of Sciences, Vol. 90, Issue 13
Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana
journal, August 2003
- Alonso, J. M.; Stepanova, Anna N.; Leisse, Thomas J.
- Science, Vol. 301, Issue 5633, p. 653-657
Molecular cloning and sequence of cDNA encoding the plasma membrane proton pump (H+-ATPase) of Arabidopsis thaliana.
journal, February 1989
- Harper, J. F.; Surowy, T. K.; Sussman, M. R.
- Proceedings of the National Academy of Sciences, Vol. 86, Issue 4
Elastic Domains Regulate Growth and Organogenesis in the Plant Shoot Apical Meristem
journal, March 2012
- Kierzkowski, D.; Nakayama, N.; Routier-Kierzkowska, A. -L.
- Science, Vol. 335, Issue 6072
A High-Resolution Root Spatiotemporal Map Reveals Dominant Expression Patterns
journal, November 2007
- Brady, S. M.; Orlando, D. A.; Lee, J. -Y.
- Science, Vol. 318, Issue 5851
Revealing Shared and Distinct Gene Network Organization in Arabidopsis Immune Responses by Integrative Analysis
journal, January 2015
- Dong, Xiaobao; Jiang, Zhenhong; Peng, You-Liang
- Plant Physiology, Vol. 167, Issue 3
Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden
journal, June 2013
- Long, Quan; Rabanal, Fernando A.; Meng, Dazhe
- Nature Genetics, Vol. 45, Issue 8
Multiscale digital Arabidopsis predicts individual organ and whole-organism growth
journal, September 2014
- Chew, Yin Hoon; Wenden, Bénédicte; Flis, Anna
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 39
An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations
journal, June 2012
- Segura, Vincent; Vilhjálmsson, Bjarni J.; Platt, Alexander
- Nature Genetics, Vol. 44, Issue 7
Moving forward in reverse: genetic technologies to enable genome-wide phenomic screens in Arabidopsis
journal, June 2006
- Alonso, Jose M.; Ecker, Joseph R.
- Nature Reviews Genetics, Vol. 7, Issue 7
Establishment of a gene tagging system in Arabidopsis thaliana based on the maize transposable element Ac
journal, July 1992
- Altmann, T.; Schmidt, R.; Willmitzer, L.
- Theoretical and Applied Genetics, Vol. 84-84, Issue 3-4
Expression of the Pseudomonas syringae Avirulence Protein AvrB in Plant Cells Alleviates Its Dependence on the Hypersensitive Response and Pathogenicity (Hrp) Secretion System in Eliciting Genotype-Specific Hypersensitive Cell Death
journal, July 1996
- Gopalan, Suresh; Bauer, David W.; Alfano, James R.
- The Plant Cell, Vol. 8, Issue 7
ULTRAPETALA1 encodes a SAND domain putative transcriptional regulator that controls shoot and floral meristem activity in Arabidopsis
journal, February 2005
- Carles, C. C.
- Development, Vol. 132, Issue 5
Primary structure, genomic organization and heterologous expression of a glucose transporter from Arabidopsis thaliana.
journal, October 1990
- Sauer, N.; Friedländer, K.; Gräml-Wicke, U.
- The EMBO Journal, Vol. 9, Issue 10
MOR1 is essential for organizing cortical microtubules in plants
journal, May 2001
- Whittington, Angela T.; Vugrek, Oliver; Wei, Ke Jun
- Nature, Vol. 411, Issue 6837
The extent of linkage disequilibrium in Arabidopsis thaliana
journal, January 2002
- Nordborg, Magnus; Borevitz, Justin O.; Bergelson, Joy
- Nature Genetics, Vol. 30, Issue 2
Use of Arabidopsis for Genetic Dissection of Plant Defense Responses
journal, December 1997
- Glazebrook, J.; Rogers, E. E.; Ausubel, F. M.
- Annual Review of Genetics, Vol. 31, Issue 1
Auxin-induced degradation dynamics set the pace for lateral root development
journal, March 2015
- Guseman, Jessica M.; Hellmuth, Antje; Lanctot, Amy
- Journal of Cell Science, Vol. 128, Issue 6
Co-expression tools for plant biology: opportunities for hypothesis generation and caveats
journal, December 2009
- Usadel, Bj��Rn; Obayashi, Takeshi; Mutwil, Marek
- Plant, Cell & Environment, Vol. 32, Issue 12
Sucrose Efflux Mediated by SWEET Proteins as a Key Step for Phloem Transport
journal, December 2011
- Chen, L. -Q.; Qu, X. -Q.; Hou, B. -H.
- Science, Vol. 335, Issue 6065
A novel iron-regulated metal transporter from plants identified by functional expression in yeast.
journal, May 1996
- Eide, D.; Broderius, M.; Fett, J.
- Proceedings of the National Academy of Sciences, Vol. 93, Issue 11
Epigenetic regulation of stress responses in plants
journal, April 2009
- Chinnusamy, Viswanathan; Zhu, Jian-Kang
- Current Opinion in Plant Biology, Vol. 12, Issue 2
Intercellular movement of the putative transcription factor SHR in root patterning
journal, September 2001
- Nakajima, Keiji; Sena, Giovanni; Nawy, Tal
- Nature, Vol. 413, Issue 6853
Regulatory Properties of ADP Glucose Pyrophosphorylase Are Required for Adjustment of Leaf Starch Synthesis in Different Photoperiods
journal, October 2014
- Mugford, Sam T.; Fernandez, Olivier; Brinton, Jemima
- Plant Physiology, Vol. 166, Issue 4
Exploiting the triple response of Arabidopsis to identify ethylene-related mutants.
journal, June 1990
- Guzmán, P.; Ecker, J. R.
- The Plant Cell, Vol. 2, Issue 6
Arabidopsis UVR8 Regulates Ultraviolet-B Signal Transduction and Tolerance and Contains Sequence Similarity to Human Regulator of Chromatin Condensation 1
journal, August 2002
- Kliebenstein, Daniel J.; Lim, Jackie E.; Landry, Laurie G.
- Plant Physiology, Vol. 130, Issue 1
Lignin Biosynthesis and Structure
journal, May 2010
- Vanholme, R.; Demedts, B.; Morreel, K.
- Plant Physiology, Vol. 153, Issue 3, p. 895-905
CHL1 Functions as a Nitrate Sensor in Plants
journal, September 2009
- Ho, Cheng-Hsun; Lin, Shan-Hua; Hu, Heng-Cheng
- Cell, Vol. 138, Issue 6
The Arabidopsis F-box protein TIR1 is an auxin receptor
journal, May 2005
- Kepinski, Stefan; Leyser, Ottoline
- Nature, Vol. 435, Issue 7041
The F-box protein TIR1 is an auxin receptor
journal, May 2005
- Dharmasiri, Nihal; Dharmasiri, Sunethra; Estelle, Mark
- Nature, Vol. 435, Issue 7041
Patterns of population epigenomic diversity
journal, March 2013
- Schmitz, Robert J.; Schultz, Matthew D.; Urich, Mark A.
- Nature, Vol. 495, Issue 7440
Evidence for Network Evolution in an Arabidopsis Interactome Map
journal, July 2011
- Dreze, M.; Carvunis, A. -R.; Charloteaux, B.
- Science, Vol. 333, Issue 6042
Orchestration of Floral Initiation by APETALA1
journal, April 2010
- Kaufmann, K.; Wellmer, F.; Muino, J. M.
- Science, Vol. 328, Issue 5974
Epigenetic memory in plants
journal, July 2014
- Iwasaki, Mayumi; Paszkowski, Jerzy
- The EMBO Journal, Vol. 33, Issue 18
A fortunate choice: the history of Arabidopsis as a model plant
journal, November 2002
- Somerville, Chris; Koornneef, Maarten
- Nature Reviews Genetics, Vol. 3, Issue 11
Visualization of Cellulose Synthase Demonstrates Functional Association with Microtubules
journal, June 2006
- Paredez, A. R.
- Science, Vol. 312, Issue 5779
The isolation and characterization of abscisic acid-insensitive mutants of Arabidopsis thaliana
journal, July 1984
- Koornneef, M.; Reuling, G.; Karssen, C. M.
- Physiologia Plantarum, Vol. 61, Issue 3
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
journal, February 2010
- Law, Julie A.; Jacobsen, Steven E.
- Nature Reviews Genetics, Vol. 11, Issue 3
Insensitivity to Ethylene Conferred by a Dominant Mutation in Arabidopsis thaliana
journal, August 1988
- Bleecker, A. B.; Estelle, M. A.; Somerville, C.
- Science, Vol. 241, Issue 4869
Golgi Traffic and Integrity Depend on N-Myristoyl Transferase-1 in Arabidopsis
journal, May 2013
- Renna, Luciana; Stefano, Giovanni; Majeran, Wojciech
- The Plant Cell, Vol. 25, Issue 5
CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis
journal, April 2001
- Suárez-López, Paula; Wheatley, Kay; Robson, Frances
- Nature, Vol. 410, Issue 6832
The A. thaliana disease resistance gene RPS2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats
journal, December 1994
- ,
- Trends in Genetics, Vol. 10, Issue 12, p. 421
Targeted DNA excision in Arabidopsis by a re-engineered homing endonuclease
journal, January 2012
- Antunes, Mauricio S.; Smith, J. Jeff; Jantz, Derek
- BMC Biotechnology, Vol. 12, Issue 1
Gene expression map of the Arabidopsis shoot apical meristem stem cell niche
journal, March 2009
- Yadav, R. K.; Girke, T.; Pasala, S.
- Proceedings of the National Academy of Sciences, Vol. 106, Issue 12
SHOREmap: simultaneous mapping and mutation identification by deep sequencing
journal, August 2009
- Schneeberger, Korbinian; Ossowski, Stephan; Lanz, Christa
- Nature Methods, Vol. 6, Issue 8
Random GFP::cDNA fusions enable visualization of subcellular structures in cells of Arabidopsis at a high frequency
journal, March 2000
- Cutler, S. R.; Ehrhardt, D. W.; Griffitts, J. S.
- Proceedings of the National Academy of Sciences, Vol. 97, Issue 7
The DELLA motif is essential for gibberellin-induced degradation of RGA
journal, November 2001
- Dill, A.; Jung, H. -S.; Sun, T. -p.
- Proceedings of the National Academy of Sciences, Vol. 98, Issue 24
Mechanism of auxin perception by the TIR1 ubiquitin ligase
journal, April 2007
- Tan, Xu; Calderon-Villalobos, Luz Irina A.; Sharon, Michal
- Nature, Vol. 446, Issue 7136
DEMETER, a DNA Glycosylase Domain Protein, Is Required for Endosperm Gene Imprinting and Seed Viability in Arabidopsis
journal, July 2002
- Choi, Yeonhee; Gehring, Mary; Johnson, Lianna
- Cell, Vol. 110, Issue 1
Arabidopsis and the plant immune system
journal, March 2010
- Nishimura, Marc T.; Dangl, Jeffery L.
- The Plant Journal, Vol. 61, Issue 6
Molecular cloning of a family of plant genes encoding a protein homologous to plasma membrane H+-translocating ATPases
journal, July 1989
- Boutry, Marc; Michelet, Baudouin; Goffeau, André
- Biochemical and Biophysical Research Communications, Vol. 162, Issue 2
Phytochrome functions in Arabidopsis development
journal, October 2009
- Franklin, K. A.; Quail, P. H.
- Journal of Experimental Botany, Vol. 61, Issue 1
The Ubiquitin 26s Proteasome Proteolytic Pathway
journal, June 2004
- Smalle, Jan; Vierstra, Richard D.
- Annual Review of Plant Biology, Vol. 55, Issue 1
Galactose-Depleted Xyloglucan Is Dysfunctional and Leads to Dwarfism in Arabidopsis
journal, February 2015
- Kong, Yingzhen; Peña, Maria J.; Renna, Luciana
- Plant Physiology, Vol. 167, Issue 4
Auxin-induced degradation dynamics set the pace for lateral root development
journal, January 2015
- Guseman, J. M.; Hellmuth, A.; Lanctot, A.
- Development, Vol. 142, Issue 5
A gene expression map of Arabidopsis thaliana development
journal, April 2005
- Schmid, Markus; Davison, Timothy S.; Henz, Stefan R.
- Nature Genetics, Vol. 37, Issue 5
Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
journal, June 2014
- Para, A.; Li, Y.; Marshall-Colon, A.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 28
A Synthetic Approach Reveals Extensive Tunability of Auxin Signaling
journal, July 2012
- Havens, Kyle A.; Guseman, Jessica M.; Jang, Seunghee S.
- Plant Physiology, Vol. 160, Issue 1
The nature of confounding in genome-wide association studies
journal, November 2012
- Vilhjálmsson, Bjarni J.; Nordborg, Magnus
- Nature Reviews Genetics, Vol. 14, Issue 1
Genetic interactions among floral homeotic genes of Arabidopsis
journal, May 1991
- Bowman, John L.; Smyth, David R.; Meyerowitz, Elliot M.
- Development, Vol. 112, Issue 1
Regulators of PP2C Phosphatase Activity Function as Abscisic Acid Sensors
journal, April 2009
- Ma, Y.; Szostkiewicz, I.; Korte, A.
- Science
Abscisic Acid Inhibits Type 2C Protein Phosphatases via the PYR/PYL Family of START Proteins
journal, April 2009
- Park, S. -Y.; Fung, P.; Nishimura, N.
- Science
MAX1 and MAX2 control shoot lateral branching in Arabidopsis
journal, March 2002
- Stirnberg, Petra; van de Sande, Karin; Leyser, H. M. Ottoline
- Development, Vol. 129, Issue 5
Novel Loci Control Variation in Reproductive Timing in Arabidopsis thaliana in Natural Environments
journal, December 2002
- Weinig, Cynthia; Ungerer, Mark C.; Dorn, Lisa A.
- Genetics, Vol. 162, Issue 4
Works referencing / citing this record:
Recent advances in gene function prediction using context-specific coexpression networks in plants
journal, January 2019
- Gupta, Chirag; Pereira, Andy
- F1000Research, Vol. 8
Q&A: How do gene regulatory networks control environmental responses in plants?
journal, April 2018
- Sun, Ying; Dinneny, José R.
- BMC Biology, Vol. 16, Issue 1
Evaluating the link between photosynthetic capacity and leaf vascular organization with principal component analysis
journal, March 2018
- Polutchko, S. K.; Stewart, J. J.; Demmig-Adams, B.
- Photosynthetica, Vol. 56, Issue 1
Directions for research and training in plant omics: Big Questions and Big Data
journal, April 2019
- Argueso, Cristiana T.; Assmann, Sarah M.; Birnbaum, Kenneth D.
- Plant Direct, Vol. 3, Issue 4
A novel Arabidopsis pathosystem reveals cooperation of multiple hormonal response-pathways in host resistance against the global crop destroyer Macrophomina phaseolina
journal, December 2019
- Schroeder, Mercedes M.; Lai, Yan; Shirai, Miwa
- Scientific Reports, Vol. 9, Issue 1
Comparing Time Series Transcriptome Data Between Plants Using A Network Module Finding Algorithm
journal, March 2019
- Lee, Jiyoung; Heath, Lenwood S.; Grene, Ruth
- Plant Methods
Somatic Embryogenesis Induction in Woody Species: The Future After OMICs Data Assessment
journal, March 2019
- Pais, Maria Salomé
- Frontiers in Plant Science, Vol. 10
Never the Two Shall Mix: Robust Indel Markers to Ensure the Fidelity of Two Pivotal and Closely-Related Accessions of Brachypodium distachyon
journal, June 2019
- Brew-Appiah, Rhoda A. T.; Peracchi, Luigi M.; Sanguinet, Karen A.
- Plants, Vol. 8, Issue 6
Q&A: How do gene regulatory networks control environmental responses in plants?
journal, April 2018
- Sun, Ying; Dinneny, José R.
- BMC Biology, Vol. 16, Issue 1
Biology in Bloom: A Primer on the Arabidopsis thaliana Model System
journal, April 2018
- Woodward, Andrew W.; Bartel, Bonnie
- Genetics, Vol. 208, Issue 4
Habitat Temperature and Precipitation of Arabidopsis thaliana Ecotypes Determine the Response of Foliar Vasculature, Photosynthesis, and Transpiration to Growth Temperature
journal, July 2016
- Adams, William W.; Stewart, Jared J.; Cohu, Christopher M.
- Frontiers in Plant Science, Vol. 7
Plant microRNAs: key regulators of root architecture and biotic interactions
journal, June 2016
- Couzigou, Jean-Malo; Combier, Jean-Philippe
- New Phytologist, Vol. 212, Issue 1
Molecular tools enabling pennycress ( Thlaspi arvense ) as a model plant and oilseed cash cover crop
journal, October 2018
- McGinn, Michaela; Phippen, Winthrop B.; Chopra, Ratan
- Plant Biotechnology Journal, Vol. 17, Issue 4
Blurring the boundaries between cereal crops and model plants
journal, November 2019
- Borrill, Philippa
- New Phytologist
Identification and stacking of crucial traits required for the domestication of pennycress
journal, January 2020
- Chopra, Ratan; Johnson, Evan B.; Emenecker, Ryan
- Nature Food, Vol. 1, Issue 1
Plant Life in Extreme Environments: How Do You Improve Drought Tolerance?
journal, May 2018
- Bechtold, Ulrike
- Frontiers in Plant Science, Vol. 9
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome
journal, February 2017
- Cheng, Chia-Yi; Krishnakumar, Vivek; Chan, Agnes P.
- The Plant Journal, Vol. 89, Issue 4
Recent advances in gene function prediction using context-specific coexpression networks in plants
journal, January 2019
- Gupta, Chirag; Pereira, Andy
- F1000Research, Vol. 8
miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment
journal, April 2016
- Wójcik, Anna M.; Gaj, Małgorzata D.
- Planta, Vol. 244, Issue 1
Resolving the backbone of the Brassicaceae phylogeny for investigating trait diversity
journal, February 2019
- Nikolov, Lachezar A.; Shushkov, Philip; Nevado, Bruno
- New Phytologist, Vol. 222, Issue 3
Plant phenotyping: a perspective
journal, December 2016
- Mishra, Kumud B.; Mishra, Anamika; Klem, Karel
- Indian Journal of Plant Physiology, Vol. 21, Issue 4
Network-based hierarchical population structure analysis for large genomic data sets
journal, November 2019
- Greenbaum, Gili; Rubin, Amir; Templeton, Alan R.
- Genome Research, Vol. 29, Issue 12
A systems approach to a spatio-temporal understanding of the drought stress response in maize
journal, July 2017
- Miao, Zhenyan; Han, Zhaoxue; Zhang, Ting
- Scientific Reports, Vol. 7, Issue 1
Habitat Temperature and Precipitation of Arabidopsis thaliana Ecotypes Determine the Response of Foliar Vasculature, Photosynthesis, and Transpiration to Growth Temperature
journal, July 2016
- Adams, William W.; Stewart, Jared J.; Cohu, Christopher M.
- Frontiers in Plant Science, Vol. 7
African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana
journal, May 2017
- Durvasula, Arun; Fulgione, Andrea; Gutaker, Rafal M.
- Proceedings of the National Academy of Sciences, Vol. 114, Issue 20
Sustainable funding for biocuration: The Arabidopsis Information Resource (TAIR) as a case study of a subscription-based funding model
journal, January 2016
- Reiser, Leonore; Berardini, Tanya Z.; Li, Donghui
- Database, Vol. 2016
Cataloging the Brassica napus seed metabolome
journal, October 2016
- Misra, Biswapriya Biswavas
- Cogent Food & Agriculture, Vol. 2, Issue 1
Network-based hierarchical population structure analysis for large genomic datasets
posted_content, September 2019
- Greenbaum, Gili; Rubin, Amir; Templeton, Alan R.
- Genome Research
A systems approach to a spatio-temporal understanding of the drought stress response in maize
journal, July 2017
- Miao, Zhenyan; Han, Zhaoxue; Zhang, Ting
- Scientific Reports, Vol. 7, Issue 1
Fruit ripening: the role of hormones, cell wall modifications, and their relationship with pathogens
journal, March 2019
- Forlani, Sara; Masiero, Simona; Mizzotti, Chiara
- Journal of Experimental Botany, Vol. 70, Issue 11
Arabidopsis: the original plant chassis organism
journal, April 2018
- Holland, Cynthia K.; Jez, Joseph M.
- Plant Cell Reports, Vol. 37, Issue 10
miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment
journal, April 2016
- Wójcik, Anna M.; Gaj, Małgorzata D.
- Planta, Vol. 244, Issue 1
The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog
journal, October 2017
- Togninalli, Matteo; Seren, Ümit; Meng, Dazhe
- Nucleic Acids Research, Vol. 46, Issue D1