Progressive Chromatin Condensation and H3K9 Methylation Regulate the Differentiation of Embryonic and Hematopoietic Stem Cells

Ugarte, Fernando; Sousae, Rebekah; Cinquin, Bertrand; Martin, Eric W.; Krietsch, Jana; Sanchez, Gabriela; Inman, Margaux; Tsang, Herman; Warr, Matthew; Passegué, Emmanuelle; Larabell, Carolyn A.; Forsberg, E. Camilla

doi:10.1016/j.stemcr.2015.09.009

Title: Progressive Chromatin Condensation and H3K9 Methylation Regulate the Differentiation of Embryonic and Hematopoietic Stem Cells

Journal Article · 31 October 2015 · Stem Cell Reports

DOI: https://doi.org/10.1016/j.stemcr.2015.09.009 · OSTI ID:1242997

Ugarte, Fernando; Sousae, Rebekah; Cinquin, Bertrand; Martin, Eric W.; Krietsch, Jana; Sanchez, Gabriela; Inman, Margaux; Tsang, Herman; Warr, Matthew; Passegué, Emmanuelle; Larabell, Carolyn A.; Forsberg, E. Camilla

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Research Organization:: Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER); USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-23)

Grant/Contract Number:: AC02-05CH11231

OSTI ID:: 1242997

Journal Information:: Stem Cell Reports, Journal Name: Stem Cell Reports Journal Issue: 5 Vol. 5; ISSN 2213-6711

Publisher:: ElsevierCopyright Statement

Country of Publication:: Netherlands

Language:: English

References (46)

A novel CXC chemokine PBSF/SDF-1 and its receptor CXCR4: their functions in development, hematopoiesis and HIV infection Nagasawa, Takashi; Tachibana, Kazunobu; Kishimoto, Tadamitsu Seminars in Immunology, Vol. 10, Issue 3 https://doi.org/10.1006/smim.1998.0128	journal	June 1998
Nanoimaging Cells Using Soft X-Ray Tomography Parkinson, Dilworth Y.; Epperly, Lindsay R.; McDermott, Gerry Nanoimaging https://doi.org/10.1007/978-1-62703-137-0_25	book	September 2012
Quantitation of Nucleosome Acetylation and Other Histone Posttranslational Modifications Using Microscale NU-ELISA Dai, Bo; Giardina, Charles; Rasmussen, Theodore P. Methods in Molecular Biology https://doi.org/10.1007/978-1-62703-305-3_13	book	December 2012
DNA hypomethylation in breast cancer: An independent parameter of tumor progression? Bernardino, J.; Roux, C.; Almeida, A. Cancer Genetics and Cytogenetics, Vol. 97, Issue 2 https://doi.org/10.1016/S0165-4608(96)00385-8	journal	September 1997
A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells Bernstein, Bradley E.; Mikkelsen, Tarjei S.; Xie, Xiaohui Cell, Vol. 125, Issue 2 https://doi.org/10.1016/j.cell.2006.02.041	journal	April 2006
New Evidence Supporting Megakaryocyte-Erythrocyte Potential of Flk2/Flt3+ Multipotent Hematopoietic Progenitors Forsberg, E. Camilla; Serwold, Thomas; Kogan, Scott Cell, Vol. 126, Issue 2 https://doi.org/10.1016/j.cell.2006.06.037	journal	July 2006
High-Resolution Profiling of Histone Methylations in the Human Genome Barski, Artem; Cuddapah, Suresh; Cui, Kairong Cell, Vol. 129, Issue 4 https://doi.org/10.1016/j.cell.2007.05.009	journal	May 2007
Developmental Fate and Cellular Maturity Encoded in Human Regulatory DNA Landscapes Stergachis, Andrew B.; Neph, Shane; Reynolds, Alex Cell, Vol. 154, Issue 4 https://doi.org/10.1016/j.cell.2013.07.020	journal	August 2013
Nonstochastic Reprogramming from a Privileged Somatic Cell State Guo, Shangqin; Zi, Xiaoyuan; Schulz, Vincent P. Cell, Vol. 156, Issue 4 https://doi.org/10.1016/j.cell.2014.01.020	journal	February 2014
Hyperdynamic Plasticity of Chromatin Proteins in Pluripotent Embryonic Stem Cells Meshorer, Eran; Yellajoshula, Dhananjay; George, Eric Developmental Cell, Vol. 10, Issue 1 https://doi.org/10.1016/j.devcel.2005.10.017	journal	January 2006
Flk2/Flt3 promotes both myeloid and lymphoid development by expanding non–self-renewing multipotent hematopoietic progenitor cells Beaudin, Anna E.; Boyer, Scott W.; Forsberg, E. Camilla Experimental Hematology, Vol. 42, Issue 3 https://doi.org/10.1016/j.exphem.2013.11.013	journal	March 2014
DNA Methylation Dynamics during In Vivo Differentiation of Blood and Skin Stem Cells Bock, Christoph; Beerman, Isabel; Lien, Wen-Hui Molecular Cell, Vol. 47, Issue 4 https://doi.org/10.1016/j.molcel.2012.06.019	journal	August 2012
X-ray tomography of whole cells Le Gros, Mark A.; McDermott, Gerry; Larabell, Carolyn A. Current Opinion in Structural Biology, Vol. 15, Issue 5 https://doi.org/10.1016/j.sbi.2005.08.008	journal	October 2005
The Transcription Factor EGR1 Controls Both the Proliferation and Localization of Hematopoietic Stem Cells Min, Irene M.; Pietramaggiori, Giorgio; Kim, Francis S. Cell Stem Cell, Vol. 2, Issue 4 https://doi.org/10.1016/j.stem.2008.01.015	journal	April 2008
Global Transcription in Pluripotent Embryonic Stem Cells Efroni, Sol; Duttagupta, Radharani; Cheng, Jill Cell Stem Cell, Vol. 2, Issue 5 https://doi.org/10.1016/j.stem.2008.03.021	journal	May 2008
A Combined Chemical and Genetic Approach for the Generation of Induced Pluripotent Stem Cells Shi, Yan; Tae Do, Jeong; Desponts, Caroline Cell Stem Cell, Vol. 2, Issue 6 https://doi.org/10.1016/j.stem.2008.05.011	journal	June 2008
DNA Methyltransferase 1 Is Essential for and Uniquely Regulates Hematopoietic Stem and Progenitor Cells Trowbridge, Jennifer J.; Snow, Jonathan W.; Kim, Jonghwan Cell Stem Cell, Vol. 5, Issue 4 https://doi.org/10.1016/j.stem.2009.08.016	journal	October 2009
Robo4 Cooperates with Cxcr4 to Specify Hematopoietic Stem Cell Localization to Bone Marrow Niches Smith-Berdan, Stephanie; Nguyen, Andrew; Hassanein, Deena Cell Stem Cell, Vol. 8, Issue 1 https://doi.org/10.1016/j.stem.2010.11.030	journal	January 2011
All Hematopoietic Cells Develop from Hematopoietic Stem Cells through Flk2/Flt3-Positive Progenitor Cells Boyer, Scott W.; Schroeder, Aaron V.; Smith-Berdan, Stephanie Cell Stem Cell, Vol. 9, Issue 1 https://doi.org/10.1016/j.stem.2011.04.021	journal	July 2011
RETRACTED: Protein Kinase A Determines Timing of Early Differentiation through Epigenetic Regulation with G9a Yamamizu, Kohei; Fujihara, Mayako; Tachibana, Makoto Cell Stem Cell, Vol. 10, Issue 6 https://doi.org/10.1016/j.stem.2012.02.022	journal	June 2012
ROBO4-Mediated Vascular Integrity Regulates the Directionality of Hematopoietic Stem Cell Trafficking Smith-Berdan, Stephanie; Nguyen, Andrew; Hong, Matthew A. Stem Cell Reports, Vol. 4, Issue 2 https://doi.org/10.1016/j.stemcr.2014.12.013	journal	February 2015
Soft X-ray tomography and cryogenic light microscopy: the cool combination in cellular imaging McDermott, Gerry; Le Gros, Mark A.; Knoechel, Christian G. Trends in Cell Biology, Vol. 19, Issue 11 https://doi.org/10.1016/j.tcb.2009.08.005	journal	November 2009
Function of the chemokine receptor CXCR4 in haematopoiesis and in cerebellar development Zou, Yong-Rui; Kottmann, Andreas H.; Kuroda, Masahiko Nature, Vol. 393, Issue 6685 https://doi.org/10.1038/31269	journal	June 1998
Chd1 regulates open chromatin and pluripotency of embryonic stem cells Gaspar-Maia, Alexandre; Alajem, Adi; Polesso, Fanny Nature, Vol. 460, Issue 7257 https://doi.org/10.1038/nature08212	journal	July 2009
Comprehensive methylome map of lineage commitment from haematopoietic progenitors Ji, Hong; Ehrlich, Lauren I. R.; Seita, Jun Nature, Vol. 467, Issue 7313 https://doi.org/10.1038/nature09367	journal	August 2010
Chromatin signatures of pluripotent cell lines Azuara, Véronique; Perry, Pascale; Sauer, Stephan Nature Cell Biology, Vol. 8, Issue 5 https://doi.org/10.1038/ncb1403	journal	March 2006
Proteomic and genomic approaches reveal critical functions of H3K9 methylation and heterochromatin protein-1γ in reprogramming to pluripotency Sridharan, Rupa; Gonzales-Cope, Michelle; Chronis, Constantinos Nature Cell Biology, Vol. 15, Issue 7 https://doi.org/10.1038/ncb2768	journal	June 2013
A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells Vedadi, Masoud; Barsyte-Lovejoy, Dalia; Liu, Feng Nature Chemical Biology, Vol. 7, Issue 8 https://doi.org/10.1038/nchembio.599	journal	July 2011
Dnmt3a is essential for hematopoietic stem cell differentiation Challen, Grant A.; Sun, Deqiang; Jeong, Mira Nature Genetics, Vol. 44, Issue 1 https://doi.org/10.1038/ng.1009	journal	December 2011
Differentiation stage determines potential of hematopoietic cells for reprogramming into induced pluripotent stem cells Eminli, Sarah; Foudi, Adlen; Stadtfeld, Matthias Nature Genetics, Vol. 41, Issue 9 https://doi.org/10.1038/ng.428	journal	August 2009
DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction Bröske, Ann-Marie; Vockentanz, Lena; Kharazi, Shabnam Nature Genetics, Vol. 41, Issue 11 https://doi.org/10.1038/ng.463	journal	October 2009
Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays Sabo, Peter J.; Kuehn, Michael S.; Thurman, Robert Nature Methods, Vol. 3, Issue 7 https://doi.org/10.1038/nmeth890	journal	June 2006
Chromatin replication and epigenome maintenance Alabert, Constance; Groth, Anja Nature Reviews Molecular Cell Biology, Vol. 13, Issue 3 https://doi.org/10.1038/nrm3288	journal	February 2012
An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency Ho, L.; Ronan, J. L.; Wu, J. Proceedings of the National Academy of Sciences, Vol. 106, Issue 13 https://doi.org/10.1073/pnas.0812889106	journal	March 2009
Cyclophosphamide/granulocyte colony-stimulating factor induces hematopoietic stem cells to proliferate prior to mobilization Morrison, S. J.; Wright, D. E.; Weissman, I. L. Proceedings of the National Academy of Sciences, Vol. 94, Issue 5 https://doi.org/10.1073/pnas.94.5.1908	journal	March 1997
Histone H1 Variants Are Differentially Expressed and Incorporated into Chromatin during Differentiation and Reprogramming to Pluripotency Terme, Jean-Michel; Sesé, Borja; Millán-Ariño, Lluis Journal of Biological Chemistry, Vol. 286, Issue 41 https://doi.org/10.1074/jbc.M111.281923	journal	October 2011
Global analysis of proliferation and cell cycle gene expression in the regulation of hematopoietic stem and progenitor cell fates Passegué, Emmanuelle; Wagers, Amy J.; Giuriato, Sylvie The Journal of Experimental Medicine, Vol. 202, Issue 11 https://doi.org/10.1084/jem.20050967	journal	December 2005
Activating and inhibitory functions for the histone lysine methyltransferase G9a in T helper cell differentiation and function Lehnertz, Bernhard; Northrop, Jeffrey P.; Antignano, Frann Journal of Experimental Medicine, Vol. 207, Issue 5 https://doi.org/10.1084/jem.20100363	journal	April 2010
G9a/GLP-dependent histone H3K9me2 patterning during human hematopoietic stem cell lineage commitment Chen, X.; Skutt-Kakaria, K.; Davison, J. Genes & Development, Vol. 26, Issue 22 https://doi.org/10.1101/gad.200329.112	journal	October 2012
H3K9 methyltransferase G9a and the related molecule GLP Shinkai, Y.; Tachibana, M. Genes & Development, Vol. 25, Issue 8 https://doi.org/10.1101/gad.2027411	journal	April 2011
G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis Tachibana, M. Genes & Development, Vol. 16, Issue 14 https://doi.org/10.1101/gad.989402	journal	July 2002
Dependence of Human Stem Cell Engraftment and Repopulation of NOD/SCID Mice on CXCR4 Peled, A. Science, Vol. 283, Issue 5403 https://doi.org/10.1126/science.283.5403.845	journal	February 1999
Necdin, a p53 target gene, regulates the quiescence and response to genotoxic stress of hematopoietic stem/progenitor cells Asai, Takashi; Liu, Yan; Di Giandomenico, Silvana Blood, Vol. 120, Issue 8 https://doi.org/10.1182/blood-2011-11-393983	journal	August 2012
CD41 expression marks myeloid-biased adult hematopoietic stem cells and increases with age Gekas, Christos; Graf, Thomas Blood, Vol. 121, Issue 22 https://doi.org/10.1182/blood-2012-09-457929	journal	May 2013
In Vitro Maintenance of Highly Purified, Transplantable Hematopoietic Stem Cells Moore, Kateri A.; Ema, Hideo; Lemischka, Ihor R. Blood, Vol. 89, Issue 12 https://doi.org/10.1182/blood.V89.12.4337	journal	June 1997
Mapping differentiation pathways from hematopoietic stem cells using Flk2/Flt3 lineage tracing Boyer, Scott W.; Beaudin, Anna E.; Forsberg, E. Camilla Cell Cycle, Vol. 11, Issue 17 https://doi.org/10.4161/cc.21279	journal	September 2012

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