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Title: Superlattices assembled through shape-induced directional binding

Abstract

Organization of spherical particles into lattices is typically driven by packing considerations. Although the addition of directional binding can significantly broaden structural diversity, nanoscale implementation remains challenging. Here we investigate the assembly of clusters and lattices in which anisotropic polyhedral blocks coordinate isotropic spherical nanoparticles via shape-induced directional interactions facilitated by DNA recognition. We show that these polyhedral blocks—cubes and octahedrons—when mixed with spheres, promote the assembly of clusters with architecture determined by polyhedron symmetry. Moreover, three-dimensional binary superlattices are formed when DNA shells accommodate the shape disparity between nanoparticle interfaces. The crystallographic symmetry of assembled lattices is determined by the spatial symmetry of the block’s facets, while structural order depends on DNA-tuned interactions and particle size ratio. Lastly, the presented lattice assembly strategy, exploiting shape for defining the global structure and DNA-mediation locally, opens novel possibilities for by-design fabrication of binary lattices.

Authors:
 [1];  [1];  [1]; ORCiD logo [1];  [1]
  1. Brookhaven National Laboratory (BNL), Upton, NY (United States). Center for Functional Nanomaterials
Publication Date:
Research Org.:
Brookhaven National Lab. (BNL), Upton, NY (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
OSTI Identifier:
1229422
Report Number(s):
BNL-111498-2015-JA
Journal ID: ISSN 2041-1723
Grant/Contract Number:  
SC00112704; AC02-98CH10886
Resource Type:
Accepted Manuscript
Journal Name:
Nature Communications
Additional Journal Information:
Journal Volume: 6; Journal ID: ISSN 2041-1723
Publisher:
Nature Publishing Group
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Lu, Fang, Yager, Kevin G., Zhang, Yugang, Xin, Huolin, and Gang, Oleg. Superlattices assembled through shape-induced directional binding. United States: N. p., 2015. Web. doi:10.1038/ncomms7912.
Lu, Fang, Yager, Kevin G., Zhang, Yugang, Xin, Huolin, & Gang, Oleg. Superlattices assembled through shape-induced directional binding. United States. doi:10.1038/ncomms7912.
Lu, Fang, Yager, Kevin G., Zhang, Yugang, Xin, Huolin, and Gang, Oleg. Thu . "Superlattices assembled through shape-induced directional binding". United States. doi:10.1038/ncomms7912. https://www.osti.gov/servlets/purl/1229422.
@article{osti_1229422,
title = {Superlattices assembled through shape-induced directional binding},
author = {Lu, Fang and Yager, Kevin G. and Zhang, Yugang and Xin, Huolin and Gang, Oleg},
abstractNote = {Organization of spherical particles into lattices is typically driven by packing considerations. Although the addition of directional binding can significantly broaden structural diversity, nanoscale implementation remains challenging. Here we investigate the assembly of clusters and lattices in which anisotropic polyhedral blocks coordinate isotropic spherical nanoparticles via shape-induced directional interactions facilitated by DNA recognition. We show that these polyhedral blocks—cubes and octahedrons—when mixed with spheres, promote the assembly of clusters with architecture determined by polyhedron symmetry. Moreover, three-dimensional binary superlattices are formed when DNA shells accommodate the shape disparity between nanoparticle interfaces. The crystallographic symmetry of assembled lattices is determined by the spatial symmetry of the block’s facets, while structural order depends on DNA-tuned interactions and particle size ratio. Lastly, the presented lattice assembly strategy, exploiting shape for defining the global structure and DNA-mediation locally, opens novel possibilities for by-design fabrication of binary lattices.},
doi = {10.1038/ncomms7912},
journal = {Nature Communications},
number = ,
volume = 6,
place = {United States},
year = {2015},
month = {4}
}

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Works referenced in this record:

DNA-based self-assembly of chiral plasmonic nanostructures with tailored optical response
journal, March 2012

  • Kuzyk, Anton; Schreiber, Robert; Fan, Zhiyuan
  • Nature, Vol. 483, Issue 7389
  • DOI: 10.1038/nature10889

Crystallization of Fluorescent Quantum Dots within a Three-Dimensional Bio-Organic Template of Actin Filaments and Lipid Membranes
journal, December 2011

  • Henry, Etienne; Dif, Aurélien; Schmutz, Marc
  • Nano Letters, Vol. 11, Issue 12
  • DOI: 10.1021/nl203216q

A general strategy for the DNA-mediated self-assembly of functional nanoparticles into heterogeneous systems
journal, October 2013

  • Zhang, Yugang; Lu, Fang; Yager, Kevin G.
  • Nature Nanotechnology, Vol. 8, Issue 11
  • DOI: 10.1038/nnano.2013.209

DNA-guided crystallization of colloidal nanoparticles
journal, January 2008

  • Nykypanchuk, Dmytro; Maye, Mathew M.; van der Lelie, Daniel
  • Nature, Vol. 451, Issue 7178, p. 549-552
  • DOI: 10.1038/nature06560

Nanoparticle Superlattice Engineering with DNA
journal, October 2011


Phase Behavior of Nanoparticles Assembled by DNA Linkers
journal, January 2009


Driving diffusionless transformations in colloidal crystals using DNA handshaking
journal, January 2012

  • Casey, Marie T.; Scarlett, Raynaldo T.; Benjamin Rogers, W.
  • Nature Communications, Vol. 3, Issue 1
  • DOI: 10.1038/ncomms2206

Arrested demixing opens route to bigels
journal, November 2012

  • Varrato, F.; Di Michele, L.; Belushkin, M.
  • Proceedings of the National Academy of Sciences, Vol. 109, Issue 47
  • DOI: 10.1073/pnas.1214971109

Self-assembly of self-limiting monodisperse supraparticles from polydisperse nanoparticles
journal, August 2011

  • Xia, Yunsheng; Nguyen, Trung Dac; Yang, Ming
  • Nature Nanotechnology, Vol. 6, Issue 9
  • DOI: 10.1038/nnano.2011.121

Ionic colloidal crystals of oppositely charged particles
journal, September 2005

  • Leunissen, Mirjam E.; Christova, Christina G.; Hynninen, Antti-Pekka
  • Nature, Vol. 437, Issue 7056
  • DOI: 10.1038/nature03946

Structural diversity in binary nanoparticle superlattices
journal, January 2006

  • Shevchenko, Elena V.; Talapin, Dmitri V.; Kotov, Nicholas A.
  • Nature, Vol. 439, Issue 7072, p. 55-59
  • DOI: 10.1038/nature04414

Supracolloidal Reaction Kinetics of Janus Spheres
journal, January 2011


Directed self-assembly of a colloidal kagome lattice
journal, January 2011

  • Chen, Qian; Bae, Sung Chul; Granick, Steve
  • Nature, Vol. 469, Issue 7330
  • DOI: 10.1038/nature09713

Phase diagram of a tetrahedral patchy particle model for different interaction ranges
journal, May 2010

  • Romano, Flavio; Sanz, Eduardo; Sciortino, Francesco
  • The Journal of Chemical Physics, Vol. 132, Issue 18
  • DOI: 10.1063/1.3393777

Macromol. Rapid Commun. 2/2010
journal, January 2010

  • Pawar, Amar B.; Kretzschmar, Ilona
  • Macromolecular Rapid Communications, Vol. 31, Issue 2
  • DOI: 10.1002/marc.201090000

Patchy from the bottom up
journal, February 2011

  • Romano, Flavio; Sciortino, Francesco
  • Nature Materials, Vol. 10, Issue 3
  • DOI: 10.1038/nmat2975

Colloids with valence and specific directional bonding
journal, October 2012


Recent progress on patchy colloids and their self-assembly
journal, April 2013


Association of limited valence patchy particles in two dimensions
journal, January 2010

  • Russo, John; Tartaglia, Piero; Sciortino, Francesco
  • Soft Matter, Vol. 6, Issue 17
  • DOI: 10.1039/c0sm00091d

Three-dimensional patchy lattice model: Ring formation and phase separation
journal, January 2014

  • Tavares, J. M.; Almarza, N. G.; Telo da Gama, M. M.
  • The Journal of Chemical Physics, Vol. 140, Issue 4
  • DOI: 10.1063/1.4863135

Stepwise surface encoding for high-throughput assembly of nanoclusters
journal, March 2009

  • Maye, Mathew M.; Nykypanchuk, Dmytro; Cuisinier, Marine
  • Nature Materials, Vol. 8, Issue 5
  • DOI: 10.1038/nmat2421

DNA-Linked Nanoparticle Building Blocks for Programmable Matter
journal, September 2011

  • Kim, Jin-Woo; Kim, Jeong-Hwan; Deaton, Russell
  • Angewandte Chemie International Edition, Vol. 50, Issue 39
  • DOI: 10.1002/anie.201102342

DNA Nanocages Swallow Gold Nanoparticles (AuNPs) to Form AuNP@DNA Cage Core–Shell Structures
journal, January 2014

  • Zhang, Chuan; Li, Xiang; Tian, Cheng
  • ACS Nano, Vol. 8, Issue 2
  • DOI: 10.1021/nn406039p

Entropically driven microphase transitions in mixtures of colloidal rods and spheres
journal, May 1998

  • Adams, Marie; Dogic, Zvonimir; Keller, Sarah L.
  • Nature, Vol. 393, Issue 6683
  • DOI: 10.1038/30700

Shape Alloys of Nanorods and Nanospheres from Self-Assembly
journal, September 2013

  • Ye, Xingchen; Millan, Jaime A.; Engel, Michael
  • Nano Letters, Vol. 13, Issue 10
  • DOI: 10.1021/nl403149u

Phase behavior of binary mixtures of hard convex polyhedra
journal, January 2013

  • Khadilkar, Mihir R.; Agarwal, Umang; Escobedo, Fernando A.
  • Soft Matter, Vol. 9, Issue 48
  • DOI: 10.1039/c3sm51822a

Shape-controlled synthesis of metal nanocrystals
journal, April 2013


Predictive Self-Assembly of Polyhedra into Complex Structures
journal, July 2012


Entropically Patchy Particles: Engineering Valence through Shape Entropy
journal, December 2013

  • van Anders, Greg; Ahmed, N. Khalid; Smith, Ross
  • ACS Nano, Vol. 8, Issue 1
  • DOI: 10.1021/nn4057353

Self-assembly of uniform polyhedral silver nanocrystals into densest packings and exotic superlattices
journal, November 2011

  • Henzie, Joel; Grünwald, Michael; Widmer-Cooper, Asaph
  • Nature Materials, Vol. 11, Issue 2
  • DOI: 10.1038/nmat3178

Dense packings of the Platonic and Archimedean solids
journal, August 2009


DNA-nanoparticle superlattices formed from anisotropic building blocks
journal, October 2010

  • Jones, Matthew R.; Macfarlane, Robert J.; Lee, Byeongdu
  • Nature Materials, Vol. 9, Issue 11, p. 913-917
  • DOI: 10.1038/nmat2870

Gold nanorods 3D-supercrystals as surface enhanced Raman scattering spectroscopy substrates for the rapid detection of scrambled prions
journal, May 2011

  • Alvarez-Puebla, R. A.; Agarwal, A.; Manna, P.
  • Proceedings of the National Academy of Sciences, Vol. 108, Issue 20
  • DOI: 10.1073/pnas.1016530108

Competition of shape and interaction patchiness for self-assembling nanoplates
journal, May 2013

  • Ye, Xingchen; Chen, Jun; Engel, Michael
  • Nature Chemistry, Vol. 5, Issue 6
  • DOI: 10.1038/nchem.1651

Cubic crystals from cubic colloids
journal, January 2011

  • Rossi, Laura; Sacanna, Stefano; Irvine, William T. M.
  • Soft Matter, Vol. 7, Issue 9
  • DOI: 10.1039/C0SM01246G

Mesophase behaviour of polyhedral particles
journal, February 2011

  • Agarwal, Umang; Escobedo, Fernando A.
  • Nature Materials, Vol. 10, Issue 3
  • DOI: 10.1038/nmat2959

Lock and key colloids
journal, March 2010

  • Sacanna, S.; Irvine, W. T. M.; Chaikin, P. M.
  • Nature, Vol. 464, Issue 7288
  • DOI: 10.1038/nature08906

Shape-Directed Binary Assembly of Anisotropic Nanoplates: A Nanocrystal Puzzle with Shape-Complementary Building Blocks
journal, May 2013

  • Paik, Taejong; Murray, Christopher B.
  • Nano Letters, Vol. 13, Issue 6
  • DOI: 10.1021/nl401370n

Self-Assembly of Archimedean Tilings with Enthalpically and Entropically Patchy Polygons
journal, February 2014

  • Millan, Jaime A.; Ortiz, Daniel; van Anders, Greg
  • ACS Nano, Vol. 8, Issue 3
  • DOI: 10.1021/nn500147u

Heuristic Rule for Binary Superlattice Coassembly: Mixed Plastic Mesophases of Hard Polyhedral Nanoparticles
journal, October 2014


Self-Assembly and Crystallization of Hairy ( f -Star) and DNA-Grafted Nanocubes
journal, January 2014

  • Knorowski, Christopher; Travesset, Alex
  • Journal of the American Chemical Society, Vol. 136, Issue 2
  • DOI: 10.1021/ja406241n

Periodic lattices of arbitrary nano-objects: modeling and applications for self-assembled systems
journal, December 2013

  • Yager, Kevin G.; Zhang, Yugang; Lu, Fang
  • Journal of Applied Crystallography, Vol. 47, Issue 1
  • DOI: 10.1107/S160057671302832X

DNA-Based Approach for Interparticle Interaction Control
journal, May 2007

  • Nykypanchuk, Dmytro; Maye, Mathew M.; van der Lelie, Daniel
  • Langmuir, Vol. 23, Issue 11
  • DOI: 10.1021/la0637566

Truncated Ditetragonal Gold Prisms as Nanofacet Activators of Catalytic Platinum
journal, November 2011

  • Lu, Fang; Zhang, Yu; Zhang, Lihua
  • Journal of the American Chemical Society, Vol. 133, Issue 45, p. 18074-18077
  • DOI: 10.1021/ja207848e

Formation and Assembly−Disassembly Processes of ZnO Hexagonal Pyramids Driven by Dipolar and Excluded Volume Interactions
journal, February 2010

  • Yang, Ming; Sun, Kai; Kotov, Nicholas A.
  • Journal of the American Chemical Society, Vol. 132, Issue 6
  • DOI: 10.1021/ja906868h

Seed-Mediated Synthesis of Gold Tetrahedra in High Purity and with Tunable, Well-Controlled Sizes
journal, June 2014

  • Zheng, Yiqun; Liu, Wenying; Lv, Tian
  • Chemistry - An Asian Journal, Vol. 9, Issue 9
  • DOI: 10.1002/asia.201402499

A general approach to DNA-programmable atom equivalents
journal, May 2013

  • Zhang, Chuan; Macfarlane, Robert J.; Young, Kaylie L.
  • Nature Materials, Vol. 12, Issue 8
  • DOI: 10.1038/nmat3647

Discrete Nanocubes as Plasmonic Reporters of Molecular Chirality
journal, June 2013

  • Lu, Fang; Tian, Ye; Liu, Mingzhao
  • Nano Letters, Vol. 13, Issue 7
  • DOI: 10.1021/nl401107g

Epitaxial Growth of Heterogeneous Metal Nanocrystals: From Gold Nano-octahedra to Palladium and Silver Nanocubes
journal, June 2008

  • Fan, Feng-Ru; Liu, De-Yu; Wu, Yuan-Fei
  • Journal of the American Chemical Society, Vol. 130, Issue 22
  • DOI: 10.1021/ja801566d

Plasmon Coupling in Layer-by-Layer Assembled Gold Nanorod Films
journal, April 2007

  • Vial, Stéphanie; Pastoriza-Santos, Isabel; Pérez-Juste, Jorge
  • Langmuir, Vol. 23, Issue 8, p. 4606-4611
  • DOI: 10.1021/la063753t

Maximizing DNA Loading on a Range of Gold Nanoparticle Sizes
journal, December 2006

  • Hurst, Sarah J.; Lytton-Jean, Abigail K. R.; Mirkin, Chad A.
  • Analytical Chemistry, Vol. 78, Issue 24
  • DOI: 10.1021/ac0613582

Self-assembly of self-limiting monodisperse supraparticles from polydisperse nanoparticles
journal, July 2012

  • Xia, Yunsheng; Nguyen, Trung Dac; Yang, Ming
  • Nature Nanotechnology, Vol. 7, Issue 7
  • DOI: 10.1038/nnano.2012.106

    Works referencing / citing this record:

    Kinetics of pressure-induced nanocrystal superlattice formation
    journal, January 2019

    • Lehmkühler, Felix; Schroer, Martin A.; Markmann, Verena
    • Physical Chemistry Chemical Physics, Vol. 21, Issue 38
    • DOI: 10.1039/c9cp04658e

    Giant molecules: where chemistry, physics, and bio-science meet
    journal, February 2017

    • Yin, Guang-Zhong; Zhang, Wen-Bin; Cheng, Stephen Z. D.
    • Science China Chemistry, Vol. 60, Issue 3
    • DOI: 10.1007/s11426-016-0436-x

    Kinetics of pressure-induced nanocrystal superlattice formation
    journal, January 2019

    • Lehmkühler, Felix; Schroer, Martin A.; Markmann, Verena
    • Physical Chemistry Chemical Physics, Vol. 21, Issue 38
    • DOI: 10.1039/c9cp04658e

    Understanding and tailoring ligand interactions in the self-assembly of branched colloidal nanocrystals into planar superlattices
    journal, March 2018


    In Situ Atomic Force Microscopy of the Reconfiguration of On‐Surface Self‐Assembled DNA‐Nanoparticle Superlattices
    journal, March 2019

    • Shekhirev, Mikhail; Sutter, Eli; Sutter, Peter
    • Advanced Functional Materials, Vol. 29, Issue 10
    • DOI: 10.1002/adfm.201806924

    From Atoms to Lives: The Evolution of Nanoparticle Assemblies
    journal, January 2019

    • Xue, Zhenjie; Yan, Cong; Wang, Tie
    • Advanced Functional Materials, Vol. 29, Issue 12
    • DOI: 10.1002/adfm.201807658

    Progress and Opportunities in Soft Photonics and Biologically Inspired Optics
    journal, October 2017


    Nonisotropic Self-Assembly of Nanoparticles: From Compact Packing to Functional Aggregates
    journal, May 2018

    • Bouju, Xavier; Duguet, Étienne; Gauffre, Fabienne
    • Advanced Materials, Vol. 30, Issue 27
    • DOI: 10.1002/adma.201706558

    Programmable Supra-Assembly of a DNA Surface Adapter for Tunable Chiral Directional Self-Assembly of Gold Nanorods
    journal, October 2017


    Real‐Time Probing of Nanowire Assembly Kinetics at the Air–Water Interface by In Situ Synchrotron X‐Ray Scattering
    journal, July 2018

    • He, Zhen; Jiang, Hui‐Jun; Wu, Long‐Long
    • Angewandte Chemie, Vol. 130, Issue 27
    • DOI: 10.1002/ange.201803552

    Programmable Supra-Assembly of a DNA Surface Adapter for Tunable Chiral Directional Self-Assembly of Gold Nanorods
    journal, October 2017

    • Lan, Xiang; Su, Zhaoming; Zhou, Yadong
    • Angewandte Chemie International Edition, Vol. 56, Issue 46
    • DOI: 10.1002/anie.201709775

    Real‐Time Probing of Nanowire Assembly Kinetics at the Air–Water Interface by In Situ Synchrotron X‐Ray Scattering
    journal, July 2018

    • He, Zhen; Jiang, Hui‐Jun; Wu, Long‐Long
    • Angewandte Chemie International Edition, Vol. 57, Issue 27
    • DOI: 10.1002/anie.201803552

    Colloidal Molecules from Valence-Endowed Nanoparticles by Covalent Chemistry
    journal, October 2018

    • Rouet, Pierre-Etienne; Chomette, Cyril; Duguet, Etienne
    • Angewandte Chemie International Edition, Vol. 57, Issue 48
    • DOI: 10.1002/anie.201809895

    Hamilton Receptor‐Mediated Self‐Assembly of Orthogonally Functionalized Au and TiO 2 Nanoparticles
    journal, March 2019

    • Ali, Muhammad; Hasenöhrl, Dominik H.; Zeininger, Lukas
    • Helvetica Chimica Acta, Vol. 102, Issue 4
    • DOI: 10.1002/hlca.201900015

    Using DNA to program the self-assembly of colloidal nanoparticles and microparticles
    journal, March 2016

    • Rogers, W. Benjamin; Shih, William M.; Manoharan, Vinothan N.
    • Nature Reviews Materials, Vol. 1, Issue 3
    • DOI: 10.1038/natrevmats.2016.8

    Lattice engineering through nanoparticle–DNA frameworks
    journal, February 2016

    • Tian, Ye; Zhang, Yugang; Wang, Tong
    • Nature Materials, Vol. 15, Issue 6, p. 654-661
    • DOI: 10.1038/nmat4571

    Kinetics of the self-assembly of nanocrystal superlattices measured by real-time in situ X-ray scattering
    journal, March 2016

    • Weidman, Mark C.; Smilgies, Detlef-M.; Tisdale, William A.
    • Nature Materials, Vol. 15, Issue 7
    • DOI: 10.1038/nmat4600

    Molecular engineering of chiral colloidal liquid crystals using DNA origami
    journal, May 2017

    • Siavashpouri, Mahsa; Wachauf, Christian H.; Zakhary, Mark J.
    • Nature Materials, Vol. 16, Issue 8
    • DOI: 10.1038/nmat4909

    Space- and time-resolved small angle X-ray scattering to probe assembly of silver nanocrystal superlattices
    journal, October 2018


    Crystal engineering with DNA
    journal, February 2019

    • Laramy, Christine R.; O’Brien, Matthew N.; Mirkin, Chad A.
    • Nature Reviews Materials, Vol. 4, Issue 3
    • DOI: 10.1038/s41578-019-0087-2

    Thermally triggered phononic gaps in liquids at THz scale
    journal, January 2016

    • Bolmatov, Dima; Zhernenkov, Mikhail; Zav’yalov, Dmitry
    • Scientific Reports, Vol. 6, Issue 1
    • DOI: 10.1038/srep19469

    Phase separation and self-assembly in a fluid of Mickey Mouse particles
    journal, January 2015

    • Avvisati, Guido; Dijkstra, Marjolein
    • Soft Matter, Vol. 11, Issue 43
    • DOI: 10.1039/c5sm02076j

    Limiting the valence: advancements and new perspectives on patchy colloids, soft functionalized nanoparticles and biomolecules
    journal, January 2017

    • Bianchi, Emanuela; Capone, Barbara; Coluzza, Ivan
    • Physical Chemistry Chemical Physics, Vol. 19, Issue 30
    • DOI: 10.1039/c7cp03149a

    Optimising minimal building blocks for addressable self-assembly
    journal, January 2017


    Nanoparticle self-assembly: from interactions in suspension to polymer nanocomposites
    journal, January 2018

    • Genix, Anne-Caroline; Oberdisse, Julian
    • Soft Matter, Vol. 14, Issue 25
    • DOI: 10.1039/c8sm00430g

    Optimizing the formation of colloidal compounds with components of different shapes
    journal, December 2017

    • Escobedo, Fernando A.
    • The Journal of Chemical Physics, Vol. 147, Issue 21
    • DOI: 10.1063/1.5006047

    Unusual packing of soft-shelled nanocubes
    journal, May 2019


    Diamond family of nanoparticle superlattices
    journal, February 2016


    Clathrate colloidal crystals
    journal, March 2017


    Three-dimensional molecular and nanoparticle crystallization by DNA nanotechnology
    journal, December 2017