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Title: Genome Sequencing of 18 Francisella Strains To Aid in Assay Development and Testing

Abstract

Francisella tularensis is a highly infectious bacterium that has the potential of causing high fatality rates if infections are untreated. To aid in the development of rapid and accurate detection assays, we have sequenced and annotated the genomes of 18 F. tularensis and Francisella philomiragia strains.

Authors:
ORCiD logo [1];  [1];  [1];  [2];  [3];  [4];  [5];  [3];  [1];  [1];  [1];  [2];  [4];  [5];  [5];  [4];  [3];  [1];  [2];  [1]
+ Show Author Affiliations
  1. Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
  2. United States Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, Maryland (United States). Diagnostic Systems Division
  3. Naval Medical Research Center (NMRC)-Frederick, Fort Detrick, Maryland (United States); Henry M. Jackson Foundation, Bethesda, Maryland (United States)
  4. United States Army Medical Research Institute of Infectious Diseases (USAMRIID), Fort Detrick, Maryland (United States)
  5. United States Army Edgewood Chemical Biological Center (ECBC), Aberdeen, Maryland (United States)
Publication Date:
Research Org.:
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
Sponsoring Org.:
USDOE
OSTI Identifier:
1221144
Report Number(s):
LA-UR-14-29607
Journal ID: ISSN 2169-8287
Grant/Contract Number:  
AC52-06NA25396
Resource Type:
Accepted Manuscript
Journal Name:
Genome Announcements
Additional Journal Information:
Journal Volume: 3; Journal Issue: 2; Journal ID: ISSN 2169-8287
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES

Citation Formats

Johnson, Shannon L., Daligault, Hajnalka E., Davenport, Karen W., Coyne, Susan R., Frey, Kenneth G., Koroleva, Galina I., Broomall, Stacey M., Bishop-Lilly, Kimberly A., Bruce, David C., Chertkov, Olga, Freitas, Tracey, Jaissle, James, Ladner, Jason T., Rosenzweig, C. Nicole, Gibbons, Henry S., Palacios, Gustavo F., Redden, Cassie L., Xu, Yan, Minogue, Timothy D., and Chain, Patrick S. Genome Sequencing of 18 Francisella Strains To Aid in Assay Development and Testing. United States: N. p., 2015. Web. doi:10.1128/genomeA.00147-15.
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Johnson, Shannon L., Daligault, Hajnalka E., Davenport, Karen W., Coyne, Susan R., Frey, Kenneth G., Koroleva, Galina I., Broomall, Stacey M., Bishop-Lilly, Kimberly A., Bruce, David C., Chertkov, Olga, Freitas, Tracey, Jaissle, James, Ladner, Jason T., Rosenzweig, C. Nicole, Gibbons, Henry S., Palacios, Gustavo F., Redden, Cassie L., Xu, Yan, Minogue, Timothy D., & Chain, Patrick S. Genome Sequencing of 18 Francisella Strains To Aid in Assay Development and Testing. United States. https://doi.org/10.1128/genomeA.00147-15
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Johnson, Shannon L., Daligault, Hajnalka E., Davenport, Karen W., Coyne, Susan R., Frey, Kenneth G., Koroleva, Galina I., Broomall, Stacey M., Bishop-Lilly, Kimberly A., Bruce, David C., Chertkov, Olga, Freitas, Tracey, Jaissle, James, Ladner, Jason T., Rosenzweig, C. Nicole, Gibbons, Henry S., Palacios, Gustavo F., Redden, Cassie L., Xu, Yan, Minogue, Timothy D., and Chain, Patrick S. Thu . "Genome Sequencing of 18 Francisella Strains To Aid in Assay Development and Testing". United States. https://doi.org/10.1128/genomeA.00147-15. https://www.osti.gov/servlets/purl/1221144.
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@article{osti_1221144,
title = {Genome Sequencing of 18 Francisella Strains To Aid in Assay Development and Testing},
author = {Johnson, Shannon L. and Daligault, Hajnalka E. and Davenport, Karen W. and Coyne, Susan R. and Frey, Kenneth G. and Koroleva, Galina I. and Broomall, Stacey M. and Bishop-Lilly, Kimberly A. and Bruce, David C. and Chertkov, Olga and Freitas, Tracey and Jaissle, James and Ladner, Jason T. and Rosenzweig, C. Nicole and Gibbons, Henry S. and Palacios, Gustavo F. and Redden, Cassie L. and Xu, Yan and Minogue, Timothy D. and Chain, Patrick S.},
abstractNote = {Francisella tularensis is a highly infectious bacterium that has the potential of causing high fatality rates if infections are untreated. To aid in the development of rapid and accurate detection assays, we have sequenced and annotated the genomes of 18 F. tularensis and Francisella philomiragia strains.},
doi = {10.1128/genomeA.00147-15},
journal = {Genome Announcements},
number = 2,
volume = 3,
place = {United States},
year = {Thu Apr 30 00:00:00 EDT 2015},
month = {Thu Apr 30 00:00:00 EDT 2015}
}
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https://doi.org/10.1128/genomeA.00147-15
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    Whole-Genome Relationships among Francisella Bacteria of Diverse Origins Define New Species and Provide Specific Regions for Detection
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    • Challacombe, Jean F.; Petersen, Jeannine M.; Gallegos-Graves, La Verne
    • Applied and Environmental Microbiology, Vol. 83, Issue 3
    • DOI: 10.1128/aem.02589-16

    Shared features of cryptic plasmids from environmental and pathogenic Francisella species
    journal, August 2017

    Development of a recombinase polymerase amplification assay for rapid detection of Francisella noatunensis subsp. orientalis
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