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Title: Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20

Abstract

Desulfovibrio alaskensis G20 (formerly desulfuricans G20) is a Gram-negative mesophilic sulfate-reducing bacterium (SRB), known to corrode ferrous metals and to reduce toxic radionuclides and metals such as uranium and chromium to sparingly soluble and less toxic forms. We present the 3.7 Mb genome sequence to provide insights into its physiology.

Authors:
 [1];  [1];  [2];  [2];  [3];  [3];  [4];  [5];  [6];  [6];  [6];  [6];  [6];  [7];  [7];  [7];  [8];  [7];  [7];  [2] more »;  [3] « less
+ Show Author Affiliations
  1. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); DOE Joint Genome Inst., Walnut Creek, CA (United States)
  2. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
  3. Univ. of Missouri, Columbia, MO (United States)
  4. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
  5. Univ. of California, Berkeley, CA (United States)
  6. Los Alamos National Lab. (LANL), Los Alamos, NM (United States); DOE Joint Genome Inst., Walnut Creek, CA (United States)
  7. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); DOE Joint Genome Inst., Walnut Creek, CA (United States)
  8. DOE Joint Genome Inst., Walnut Creek, CA (United States); Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)
Publication Date:
Research Org.:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
OSTI Identifier:
1214948
Grant/Contract Number:  
AC05-00OR22725; AC02-05CH11231; FG02-083464691; FG02-87ER13713
Resource Type:
Accepted Manuscript
Journal Name:
Journal of Bacteriology
Additional Journal Information:
Journal Volume: 193; Journal Issue: 16; Journal ID: ISSN 0021-9193
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; 60 APPLIED LIFE SCIENCES; Bacterial; genome sequence; genome annotation; iron corrosion; metal reduction

Citation Formats

Hauser, Loren J., Land, Miriam L., Brown, Steven D., Larimer, Frank L, Keller, Kimberly L., Rapp-Giles, Barbara J., Price, Morgan N., Lin, Monica A., Bruce, David C., Detter, John C., Tapia, Roxanne, Han, Cliff S., Goodwin, Lynne A., Cheng, Jan-Fang, Pitluck, Samuel J, Copeland, Alex N., Lucas, Susan, Nolan, Matt, Lapidus, Alla L., Palumbo, Anthony V., and Wall, Judy D. Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20. United States: N. p., 2011. Web. doi:10.1128/JB.05400-11.
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Hauser, Loren J., Land, Miriam L., Brown, Steven D., Larimer, Frank L, Keller, Kimberly L., Rapp-Giles, Barbara J., Price, Morgan N., Lin, Monica A., Bruce, David C., Detter, John C., Tapia, Roxanne, Han, Cliff S., Goodwin, Lynne A., Cheng, Jan-Fang, Pitluck, Samuel J, Copeland, Alex N., Lucas, Susan, Nolan, Matt, Lapidus, Alla L., Palumbo, Anthony V., & Wall, Judy D. Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20. United States. https://doi.org/10.1128/JB.05400-11
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Hauser, Loren J., Land, Miriam L., Brown, Steven D., Larimer, Frank L, Keller, Kimberly L., Rapp-Giles, Barbara J., Price, Morgan N., Lin, Monica A., Bruce, David C., Detter, John C., Tapia, Roxanne, Han, Cliff S., Goodwin, Lynne A., Cheng, Jan-Fang, Pitluck, Samuel J, Copeland, Alex N., Lucas, Susan, Nolan, Matt, Lapidus, Alla L., Palumbo, Anthony V., and Wall, Judy D. Fri . "Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20". United States. https://doi.org/10.1128/JB.05400-11. https://www.osti.gov/servlets/purl/1214948.
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@article{osti_1214948,
title = {Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20},
author = {Hauser, Loren J. and Land, Miriam L. and Brown, Steven D. and Larimer, Frank L and Keller, Kimberly L. and Rapp-Giles, Barbara J. and Price, Morgan N. and Lin, Monica A. and Bruce, David C. and Detter, John C. and Tapia, Roxanne and Han, Cliff S. and Goodwin, Lynne A. and Cheng, Jan-Fang and Pitluck, Samuel J and Copeland, Alex N. and Lucas, Susan and Nolan, Matt and Lapidus, Alla L. and Palumbo, Anthony V. and Wall, Judy D.},
abstractNote = {Desulfovibrio alaskensis G20 (formerly desulfuricans G20) is a Gram-negative mesophilic sulfate-reducing bacterium (SRB), known to corrode ferrous metals and to reduce toxic radionuclides and metals such as uranium and chromium to sparingly soluble and less toxic forms. We present the 3.7 Mb genome sequence to provide insights into its physiology.},
doi = {10.1128/JB.05400-11},
journal = {Journal of Bacteriology},
number = 16,
volume = 193,
place = {United States},
year = {Fri Jun 17 00:00:00 EDT 2011},
month = {Fri Jun 17 00:00:00 EDT 2011}
}
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Publisher's Version of Record
https://doi.org/10.1128/JB.05400-11
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Cited by: 38 works
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    The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20
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    Thermophilic lignocellulose deconstruction
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