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Title: Fungi in the future: interannual variation and effects of atmospheric change on arbuscular mycorrhizal fungal communities

Abstract

Summary Understanding the natural dynamics of arbuscular mycorrhizal ( AM ) fungi and their response to global environmental change is essential for the prediction of future plant growth and ecosystem functions. We investigated the long‐term temporal dynamics and effect of elevated atmospheric carbon dioxide ( CO 2 ) and ozone (O 3 ) concentrations on AM fungal communities. Molecular methods were used to characterize the AM fungal communities of soybean ( Glycine max ) grown under elevated and ambient atmospheric concentrations of both CO 2 and O 3 within a free air concentration enrichment experiment in three growing seasons over 5 yr. Elevated CO 2 altered the community composition of AM fungi, increasing the ratio of Glomeraceae to Gigasporaceae. By contrast, no effect of elevated O 3 on AM fungal communities was detected. However, the greatest compositional differences detected were between years, suggesting that, at least in the short term, large‐scale interannual temporal dynamics are stronger mediators than atmospheric CO 2 concentrations of AM fungal communities. We conclude that, although atmospheric change may significantly alter AM fungal communities, this effect may be masked by the influences of natural changes and successional patterns through time. We suggest that changes in carbon availabilitymore » are important determinants of the community dynamics of AM fungi.« less

Authors:
 [1];  [2];  [3];  [4];  [2]
  1. Department of Biology University of York York YO10 5DD UK, School of Biological Sciences University of Essex Wivenhoe Park Colchester CO4 3SQ UK, Department of Animal and Plant Sciences Alfred Denny Building University of Sheffield Western Bank Sheffield S10 2TN UK
  2. Department of Biology University of York York YO10 5DD UK
  3. Biosciences Division Argonne National Laboratory 9700 S. Cass Avenue Argonne IL 60439 USA
  4. School of Biological Sciences University of Essex Wivenhoe Park Colchester CO4 3SQ UK
Publication Date:
Research Org.:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
OSTI Identifier:
1778416
Alternate Identifier(s):
OSTI ID: 1212767; OSTI ID: 1778417
Grant/Contract Number:  
AC02-06CH11357
Resource Type:
Published Article
Journal Name:
New Phytologist
Additional Journal Information:
Journal Name: New Phytologist Journal Volume: 205 Journal Issue: 4; Journal ID: ISSN 0028-646X
Publisher:
Wiley-Blackwell
Country of Publication:
United Kingdom
Language:
English
Subject:
54 ENVIRONMENTAL SCIENCES; 18S rRNA; arbuscular mycorrhizas; atmospheric change; free air concentration enrichment (FACE); Glomeromycota; microbial diversity; soil fungi; temporal dynamics

Citation Formats

Cotton, T. E. Anne, Fitter, Alastair H., Miller, R. Michael, Dumbrell, Alex J., and Helgason, Thorunn. Fungi in the future: interannual variation and effects of atmospheric change on arbuscular mycorrhizal fungal communities. United Kingdom: N. p., 2015. Web. doi:10.1111/nph.13224.
Cotton, T. E. Anne, Fitter, Alastair H., Miller, R. Michael, Dumbrell, Alex J., & Helgason, Thorunn. Fungi in the future: interannual variation and effects of atmospheric change on arbuscular mycorrhizal fungal communities. United Kingdom. https://doi.org/10.1111/nph.13224
Cotton, T. E. Anne, Fitter, Alastair H., Miller, R. Michael, Dumbrell, Alex J., and Helgason, Thorunn. Mon . "Fungi in the future: interannual variation and effects of atmospheric change on arbuscular mycorrhizal fungal communities". United Kingdom. https://doi.org/10.1111/nph.13224.
@article{osti_1778416,
title = {Fungi in the future: interannual variation and effects of atmospheric change on arbuscular mycorrhizal fungal communities},
author = {Cotton, T. E. Anne and Fitter, Alastair H. and Miller, R. Michael and Dumbrell, Alex J. and Helgason, Thorunn},
abstractNote = {Summary Understanding the natural dynamics of arbuscular mycorrhizal ( AM ) fungi and their response to global environmental change is essential for the prediction of future plant growth and ecosystem functions. We investigated the long‐term temporal dynamics and effect of elevated atmospheric carbon dioxide ( CO 2 ) and ozone (O 3 ) concentrations on AM fungal communities. Molecular methods were used to characterize the AM fungal communities of soybean ( Glycine max ) grown under elevated and ambient atmospheric concentrations of both CO 2 and O 3 within a free air concentration enrichment experiment in three growing seasons over 5 yr. Elevated CO 2 altered the community composition of AM fungi, increasing the ratio of Glomeraceae to Gigasporaceae. By contrast, no effect of elevated O 3 on AM fungal communities was detected. However, the greatest compositional differences detected were between years, suggesting that, at least in the short term, large‐scale interannual temporal dynamics are stronger mediators than atmospheric CO 2 concentrations of AM fungal communities. We conclude that, although atmospheric change may significantly alter AM fungal communities, this effect may be masked by the influences of natural changes and successional patterns through time. We suggest that changes in carbon availability are important determinants of the community dynamics of AM fungi.},
doi = {10.1111/nph.13224},
journal = {New Phytologist},
number = 4,
volume = 205,
place = {United Kingdom},
year = {Mon Jan 05 00:00:00 EST 2015},
month = {Mon Jan 05 00:00:00 EST 2015}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1111/nph.13224

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Cited by: 54 works
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Works referenced in this record:

Predicting community and ecosystem outcomes of mycorrhizal responses to global change
journal, May 2013

  • Johnson, Nancy C.; Angelard, Caroline; Sanders, Ian R.
  • Ecology Letters, Vol. 16
  • DOI: 10.1111/ele.12085

Impacts of 3 years of elevated atmospheric CO 2 on rhizosphere carbon flow and microbial community dynamics
journal, November 2012

  • Drigo, Barbara; Kowalchuk, George A.; Knapp, Brigitte A.
  • Global Change Biology, Vol. 19, Issue 2
  • DOI: 10.1111/gcb.12045

Microorganisms and climate change: terrestrial feedbacks and mitigation options
journal, October 2010

  • Singh, Brajesh K.; Bardgett, Richard D.; Smith, Pete
  • Nature Reviews Microbiology, Vol. 8, Issue 11
  • DOI: 10.1038/nrmicro2439

Elevated CO2 and plant species richness impact arbuscular mycorrhizal fungal spore communities
journal, March 2003


Idiosyncrasy and overdominance in the structure of natural communities of arbuscular mycorrhizal fungi: is there a role for stochastic processes?
journal, March 2010


Multiple factors influence the role of arbuscular mycorrhizal fungi in soil aggregation—a meta-analysis
journal, September 2013

  • Leifheit, Eva F.; Veresoglou, Stavros D.; Lehmann, Anika
  • Plant and Soil, Vol. 374, Issue 1-2
  • DOI: 10.1007/s11104-013-1899-2

Relative roles of niche and neutral processes in structuring a soil microbial community
journal, November 2009

  • Dumbrell, Alex J.; Nelson, Michaela; Helgason, Thorunn
  • The ISME Journal, Vol. 4, Issue 3
  • DOI: 10.1038/ismej.2009.122

Distinct seasonal assemblages of arbuscular mycorrhizal fungi revealed by massively parallel pyrosequencing
journal, February 2011


Elevated carbon dioxide does not offset loss of soil carbon from a corn–soybean agroecosystem
journal, April 2010


Reciprocal Rewards Stabilize Cooperation in the Mycorrhizal Symbiosis
journal, August 2011


Increasing springtime ozone mixing ratios in the free troposphere over western North America
journal, January 2010

  • Cooper, O. R.; Parrish, D. D.; Stohl, A.
  • Nature, Vol. 463, Issue 7279
  • DOI: 10.1038/nature08708

Taking mycocentrism seriously: mycorrhizal fungal and plant responses to elevated CO2
journal, June 2005


Arbuscular mycorrhizal fungi benefit from 7 years of free air CO2 enrichment in well-fertilized grass and legume monocultures
journal, February 2004


Deciphering the relative contributions of multiple functions within plant–microbe symbioses
journal, June 2010

  • Sikes, Benjamin A.; Powell, Jeff R.; Rillig, Matthias C.
  • Ecology, Vol. 91, Issue 6
  • DOI: 10.1890/09-1858.1

Evolutionary trends in root-microbe symbioses
journal, September 1996

  • Fitter, A. H.; Moyerson, B.
  • Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, Vol. 351, Issue 1345, p. 1367-1375
  • DOI: 10.1098/rstb.1996.0120

Phylogenetic trait conservatism and the evolution of functional trade-offs in arbuscular mycorrhizal fungi
journal, September 2009

  • Powell, Jeff R.; Parrent, Jeri L.; Hart, Miranda M.
  • Proceedings of the Royal Society B: Biological Sciences, Vol. 276, Issue 1676
  • DOI: 10.1098/rspb.2009.1015

Secondary Succession and the Pattern of Plant Dominance Along Experimental Nitrogen Gradients
journal, February 1987

  • Tilman, David
  • Ecological Monographs, Vol. 57, Issue 3
  • DOI: 10.2307/2937080

Active root-inhabiting microbes identified by rapid incorporation of plant-derived carbon into RNA
journal, October 2007

  • Vandenkoornhuyse, P.; Mahe, S.; Ineson, P.
  • Proceedings of the National Academy of Sciences, Vol. 104, Issue 43
  • DOI: 10.1073/pnas.0705902104

Phosphorus, soluble carbohydrates and the competition between two arbuscular mycorrhizal fungi colonizing subterranean clover
journal, May 1994


Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2
journal, June 2010

  • Drigo, B.; Pijl, A. S.; Duyts, H.
  • Proceedings of the National Academy of Sciences, Vol. 107, Issue 24
  • DOI: 10.1073/pnas.0912421107

Influence of Phylogeny on Fungal Community Assembly and Ecosystem Functioning
journal, June 2007


Alteration of Soil Carbon Pools and Communities of Mycorrhizal Fungi in Chaparral Exposed to Elevated Carbon Dioxide
journal, December 2003

  • Treseder, Kathleen K.; Egerton-Warburton, Louise M.; Allen, Michael F.
  • Ecosystems, Vol. 6, Issue 8
  • DOI: 10.1007/s10021-003-0182-4

Interaction of ozone and mycorrhizal fungi on tomato as influenced by fungal species and host variety
journal, January 1984


Changes in soil microbial community structure under elevated tropospheric O3 and CO2
journal, October 2008


Interspecific differences in the response of arbuscular mycorrhizal fungi to Artemisia tridentata grown under elevated atmospheric CO2
journal, April 1998


Abrupt rise in atmospheric CO2 overestimates community response in a model plant–soil system
journal, February 2005

  • Klironomos, John N.; Allen, Michael F.; Rillig, Matthias C.
  • Nature, Vol. 433, Issue 7026
  • DOI: 10.1038/nature03268

Source-sink balance and carbon allocation below ground in plants exposed to ozone: Tansley review
journal, January 2003


Diversity of fungal symbionts in arbuscular mycorrhizas from a natural community
journal, June 1995


Life History Strategies in Gigasporaceae: Insight from Monoxenic Culture
book, January 2005


Molecular diversity of arbuscular mycorrhizal fungi colonising arable crops
journal, July 2001


What Goes in Must Come out: Testing for Biases in Molecular Analysis of Arbuscular Mycorrhizal Fungal Communities
journal, October 2014


Fresh air in the 21st century?: FRESH AIR IN THE 21ST CENTURY?
journal, January 2003

  • Prather, Michael; Gauss, Michael; Berntsen, Terje
  • Geophysical Research Letters, Vol. 30, Issue 2
  • DOI: 10.1029/2002GL016285

A meta-analysis of responses of soil biota to global change
journal, January 2011


Confidence Limits on Phylogenies: an Approach Using the Bootstrap
journal, July 1985


Phylogenetic reference data for systematics and phylotaxonomy of arbuscular mycorrhizal fungi from phylum to species level
journal, December 2011


The effects of air-borne nitrogen pollutants on species diversity in natural and semi-natural European vegetation
journal, October 1998


Differential effect of sample preservation methods on plant and arbuscular mycorrhizal fungal DNA
journal, August 2010


Towards a more plant physiological perspective on soil ecology
journal, October 2006


Relationships among arbuscular mycorrhizal fungi, vascular plants and environmental conditions in oak savannas
journal, September 2004


An In Vivo Analysis of the Effect of Season-Long Open-Air Elevation of Ozone to Anticipated 2050 Levels on Photosynthesis in Soybean
journal, August 2004

  • Morgan, Patrick B.; Bernacchi, Carl J.; Ort, Donald R.
  • Plant Physiology, Vol. 135, Issue 4
  • DOI: 10.1104/pp.104.043968

A review of surface ozone background levels and trends
journal, July 2004


High functional diversity within species of arbuscular mycorrhizal fungi
journal, August 2004


Impact of Nitrogen Deposition on the Species Richness of Grasslands
journal, March 2004


Are there benefits of simultaneous root colonization by different arbuscular mycorrhizal fungi?
journal, February 2008


Temporal variation in the arbuscular mycorrhizal communities colonising seedlings in a tropical forest
journal, October 2002


Resource availability controls fungal diversity across a plant diversity gradient: Resource availability controls fungal diversity
journal, September 2006


Mycorrhizal fungal identity and diversity relaxes plant–plant competition
journal, June 2011

  • Wagg, Cameron; Jansa, Jan; Stadler, Marina
  • Ecology, Vol. 92, Issue 6
  • DOI: 10.1890/10-1915.1