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Ten helical twist angles of B-DNA

Abstract

On the assumption that the twist angles between adjacent base-pairs in the DNA molecule are additive a linear system of 40 equations was derived from experimental measurements of the total twist angles for different pieces of DNA of known sequences. This system of equations is found to be statistically consistent providing a solution for all ten possible twist angles of B-DNA by a least squares fitting procedure. Four of the calculated twist angles were not known before. The other six twist angles calculated are very close to the experimentally measured ones. The data used were obtained by the electrophoretic band-shift method, crystallography and nuclease digestion of DNA adsorbed to mica or Ca-phosphate surface. The validity of the principle of additivity of the twist angles implies that the angle between any particular two base-pairs is a function of only these base-pairs, independent of nearest neighbors.
Publication Date:
Jan 01, 1982
Product Type:
Journal Article
Reference Number:
EDB-88-133849
Resource Relation:
Journal Name: Nucleic Acids Res.; (United Kingdom); Journal Volume: 10:3
Subject:
59 BASIC BIOLOGICAL SCIENCES; DNA; CRYSTALLOGRAPHY; ENZYMATIC HYDROLYSIS; MOLECULAR STRUCTURE; CONFORMATIONAL CHANGES; ELECTROPHORESIS; LEAST SQUARE FIT; NUCLEASES; CHEMICAL REACTIONS; DECOMPOSITION; ENZYMES; ESTERASES; HYDROLASES; HYDROLYSIS; LYSIS; MAXIMUM-LIKELIHOOD FIT; NUCLEIC ACIDS; NUMERICAL SOLUTION; ORGANIC COMPOUNDS; PHOSPHODIESTERASES; SOLVOLYSIS; 550200* - Biochemistry
OSTI ID:
6945725
Research Organizations:
Max-Planck-Institut fuer Medizinische Forschung, Heidelberg (Germany, F.R.)
Country of Origin:
United Kingdom
Language:
English
Other Identifying Numbers:
Journal ID: CODEN: NARHA
Submitting Site:
JMT
Size:
Pages: 1097-1104
Announcement Date:
Aug 01, 1988

Citation Formats

Kabsch, W, Sander, C, and Trifonov, E N. Ten helical twist angles of B-DNA. United Kingdom: N. p., 1982. Web. doi:10.1093/nar/10.3.1097.
Kabsch, W, Sander, C, & Trifonov, E N. Ten helical twist angles of B-DNA. United Kingdom. https://doi.org/10.1093/nar/10.3.1097
Kabsch, W, Sander, C, and Trifonov, E N. 1982. "Ten helical twist angles of B-DNA." United Kingdom. https://doi.org/10.1093/nar/10.3.1097.
@misc{etde_6945725,
title = {Ten helical twist angles of B-DNA}
author = {Kabsch, W, Sander, C, and Trifonov, E N}
abstractNote = {On the assumption that the twist angles between adjacent base-pairs in the DNA molecule are additive a linear system of 40 equations was derived from experimental measurements of the total twist angles for different pieces of DNA of known sequences. This system of equations is found to be statistically consistent providing a solution for all ten possible twist angles of B-DNA by a least squares fitting procedure. Four of the calculated twist angles were not known before. The other six twist angles calculated are very close to the experimentally measured ones. The data used were obtained by the electrophoretic band-shift method, crystallography and nuclease digestion of DNA adsorbed to mica or Ca-phosphate surface. The validity of the principle of additivity of the twist angles implies that the angle between any particular two base-pairs is a function of only these base-pairs, independent of nearest neighbors.}
doi = {10.1093/nar/10.3.1097}
journal = []
volume = {10:3}
journal type = {AC}
place = {United Kingdom}
year = {1982}
month = {Jan}
}