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Crystallization and preliminary X-ray diffraction studies of the carbohydrate-recognition domain of SIGN-R1, a receptor for microbial polysaccharides and sialylated antibody on splenic marginal zone macrophages

Abstract

The carbohydrate-recognition domain of the SIGN-R1 receptor from M. musculus has been crystallized by the hanging-drop vapour-diffusion method. A native data set has been collected to 1.87 Å resolution. SIGN-R1, or CD209b, is a mouse C-type lectin receptor that is expressed at high levels on macrophages in lymphoid tissues, especially within the marginal zone of the spleen. SIGN-R1 can bind and mediate the uptake of various microbial polysaccharides, including dextrans, lipopolysaccharides and pneumococcal capsular polysaccharides. It has been shown that SIGN-R1 mediates the clearance of encapsulated pneumococcus, complement fixation via binding C1q independent of antibody and innate resistance to pneumococcal infection. Recently, SIGN-R1 has also been demonstrated to bind sialylated antibody and mediate its activity to suppress autoimmunity. The carbohydrate-recognition domain (CRD) of SIGN-R1 has been cloned and overexpressed in a soluble secretory form in mammalian Chinese hamster ovary (CHO) cells. The CRD protein of SIGN-R1 was purified from CHO cell-culture supernatant and concentrated for crystallization using the hanging-drop vapour-diffusion method at 291 K. Crystals grew from a mixture of 2 M ammonium sulfate in 0.1 M bis-tris pH 5.5. Single crystals, which belonged to the monoclinic space group C2 with unit-cell parameters a = 146.72, b = 92.77, c  More>>
Authors:
Silva-Martin, Noella; [1]  Schauer, Joseph D.; Park, Chae Gyu; [2]  Hermoso, Juan A., E-mail: xjuan@iqfr.csic.es [1] 
  1. Grupo de Cristalografía Macromolecular y Biología Estructural, Instituto de Química-Física ‘Rocasolano’, Consejo Superior de Investigaciones Científicas, Serrano 119, 28006 Madrid (Spain)
  2. Laboratory of Cellular Physiology and Immunology and Chris Browne Center for Immunology and Immune Diseases, The Rockefeller University, 1230 York Avenue, New York, NY 10065 (United States)
Publication Date:
Dec 01, 2009
Product Type:
Journal Article
Resource Relation:
Journal Name: Acta Crystallographica. Section F; Journal Volume: 65; Journal Issue: Pt 12; Other Information: PMCID: PMC2802876; PMID: 20054124; PUBLISHER-ID: gj5073; OAI: oai:pubmedcentral.nih.gov:2802876; Copyright (c) International Union of Crystallography 2009; Country of input: International Atomic Energy Agency (IAEA)
Subject:
75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY; AMMONIUM SULFATES; CRYSTALLIZATION; DIFFUSION; MIXTURES; MONOCRYSTALS; RECEPTORS; RESOLUTION; SPACE GROUPS; X-RAY DIFFRACTION
OSTI ID:
22362247
Country of Origin:
United Kingdom
Language:
English
Other Identifying Numbers:
Journal ID: ISSN 1744-3091; CODEN: ACSFCL; Other: PII: S1744309109041992; TRN: GB15$0859067540
Availability:
Available from http://dx.doi.org/10.1107/S1744309109041992; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2802876
Submitting Site:
INIS
Size:
page(s) 1264-1266
Announcement Date:
Jul 27, 2015

Citation Formats

Silva-Martin, Noella, Schauer, Joseph D., Park, Chae Gyu, and Hermoso, Juan A., E-mail: xjuan@iqfr.csic.es. Crystallization and preliminary X-ray diffraction studies of the carbohydrate-recognition domain of SIGN-R1, a receptor for microbial polysaccharides and sialylated antibody on splenic marginal zone macrophages. United Kingdom: N. p., 2009. Web. doi:10.1107/S1744309109041992.
Silva-Martin, Noella, Schauer, Joseph D., Park, Chae Gyu, & Hermoso, Juan A., E-mail: xjuan@iqfr.csic.es. Crystallization and preliminary X-ray diffraction studies of the carbohydrate-recognition domain of SIGN-R1, a receptor for microbial polysaccharides and sialylated antibody on splenic marginal zone macrophages. United Kingdom. https://doi.org/10.1107/S1744309109041992
Silva-Martin, Noella, Schauer, Joseph D., Park, Chae Gyu, and Hermoso, Juan A., E-mail: xjuan@iqfr.csic.es. 2009. "Crystallization and preliminary X-ray diffraction studies of the carbohydrate-recognition domain of SIGN-R1, a receptor for microbial polysaccharides and sialylated antibody on splenic marginal zone macrophages." United Kingdom. https://doi.org/10.1107/S1744309109041992.
@misc{etde_22362247,
title = {Crystallization and preliminary X-ray diffraction studies of the carbohydrate-recognition domain of SIGN-R1, a receptor for microbial polysaccharides and sialylated antibody on splenic marginal zone macrophages}
author = {Silva-Martin, Noella, Schauer, Joseph D., Park, Chae Gyu, and Hermoso, Juan A., E-mail: xjuan@iqfr.csic.es}
abstractNote = {The carbohydrate-recognition domain of the SIGN-R1 receptor from M. musculus has been crystallized by the hanging-drop vapour-diffusion method. A native data set has been collected to 1.87 Å resolution. SIGN-R1, or CD209b, is a mouse C-type lectin receptor that is expressed at high levels on macrophages in lymphoid tissues, especially within the marginal zone of the spleen. SIGN-R1 can bind and mediate the uptake of various microbial polysaccharides, including dextrans, lipopolysaccharides and pneumococcal capsular polysaccharides. It has been shown that SIGN-R1 mediates the clearance of encapsulated pneumococcus, complement fixation via binding C1q independent of antibody and innate resistance to pneumococcal infection. Recently, SIGN-R1 has also been demonstrated to bind sialylated antibody and mediate its activity to suppress autoimmunity. The carbohydrate-recognition domain (CRD) of SIGN-R1 has been cloned and overexpressed in a soluble secretory form in mammalian Chinese hamster ovary (CHO) cells. The CRD protein of SIGN-R1 was purified from CHO cell-culture supernatant and concentrated for crystallization using the hanging-drop vapour-diffusion method at 291 K. Crystals grew from a mixture of 2 M ammonium sulfate in 0.1 M bis-tris pH 5.5. Single crystals, which belonged to the monoclinic space group C2 with unit-cell parameters a = 146.72, b = 92.77, c = 77.06 Å, β = 121.66°, allowed the collection of a full X-ray data set to a maximum resolution of 1.87 Å.}
doi = {10.1107/S1744309109041992}
journal = []
issue = {Pt 12}
volume = {65}
journal type = {AC}
place = {United Kingdom}
year = {2009}
month = {Dec}
}