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Simple, rapid HLA-DQA1 genotyping using the polymerase chain reaction and analysis by single-strand conformation polymorphism and restriction-enzyme cleavage

Abstract

A simple and rapid method for identifying alleles at the human-leucocyte-antigen-DQA1 locus (HLA-DQA1 locus) is described. The polymorphic second exon of the HLA-DQA1 locus was amplified by the polymerase-chain-reaction method. The amplified DNA was then analyzed by the single-strand-conformation-polymorphism/restriction-enzyme-cleavage assay. Using this method, the eight known DQA1 alleles could be distinguished from each other. In this paper, this method is suggested for quick genotyping of DQA1 alleles, but this method should also be useful for detecting point mutations at various positions in a fragment as well as new HLA-DQA1 genotypes. (author).
Publication Date:
Jun 01, 1993
Product Type:
Technical Report
Report Number:
RERF-TR-12-91
Reference Number:
SCA: 560151; PA: JPN-94:001046; EDB-94:047627; ERA-19:013312; NTS-94:018238; SN: 94001163750
Resource Relation:
Other Information: PBD: Jun 1993
Subject:
63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTANT EFFECTS ON LIVING ORGS. AND BIOL. MAT.; A-BOMB SURVIVORS; GENOTYPE; HIROSHIMA; NAGASAKI; LEUKOCYTES; POLYMERASES; DNA; ANTIGENS; GENE MUTATIONS; DELAYED RADIATION EFFECTS; 560151; MAN
OSTI ID:
10131553
Research Organizations:
Radiation Effects Research Foundation, Hiroshima (Japan)
Country of Origin:
Japan
Language:
English
Other Identifying Numbers:
Other: ON: DE94748531; TRN: JP9401046
Availability:
OSTI; NTIS; INIS
Submitting Site:
JPN
Size:
10 p.
Announcement Date:
Jul 04, 2005

Citation Formats

Hayashi, Tomonori, Seyama, Toshio, Ito, Takashi, Kusunoki, Yoichiro, Hirai, Yuko, Nakamura, Nori, and Akiyama, Mitoshi. Simple, rapid HLA-DQA1 genotyping using the polymerase chain reaction and analysis by single-strand conformation polymorphism and restriction-enzyme cleavage. Japan: N. p., 1993. Web.
Hayashi, Tomonori, Seyama, Toshio, Ito, Takashi, Kusunoki, Yoichiro, Hirai, Yuko, Nakamura, Nori, & Akiyama, Mitoshi. Simple, rapid HLA-DQA1 genotyping using the polymerase chain reaction and analysis by single-strand conformation polymorphism and restriction-enzyme cleavage. Japan.
Hayashi, Tomonori, Seyama, Toshio, Ito, Takashi, Kusunoki, Yoichiro, Hirai, Yuko, Nakamura, Nori, and Akiyama, Mitoshi. 1993. "Simple, rapid HLA-DQA1 genotyping using the polymerase chain reaction and analysis by single-strand conformation polymorphism and restriction-enzyme cleavage." Japan.
@misc{etde_10131553,
title = {Simple, rapid HLA-DQA1 genotyping using the polymerase chain reaction and analysis by single-strand conformation polymorphism and restriction-enzyme cleavage}
author = {Hayashi, Tomonori, Seyama, Toshio, Ito, Takashi, Kusunoki, Yoichiro, Hirai, Yuko, Nakamura, Nori, and Akiyama, Mitoshi}
abstractNote = {A simple and rapid method for identifying alleles at the human-leucocyte-antigen-DQA1 locus (HLA-DQA1 locus) is described. The polymorphic second exon of the HLA-DQA1 locus was amplified by the polymerase-chain-reaction method. The amplified DNA was then analyzed by the single-strand-conformation-polymorphism/restriction-enzyme-cleavage assay. Using this method, the eight known DQA1 alleles could be distinguished from each other. In this paper, this method is suggested for quick genotyping of DQA1 alleles, but this method should also be useful for detecting point mutations at various positions in a fragment as well as new HLA-DQA1 genotypes. (author).}
place = {Japan}
year = {1993}
month = {Jun}
}