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Title: System and method of infrared matrix-assisted laser desorption/ionization mass spectrometry in polyacrylamide gels

Abstract

A system and method for desorption and ionization of analytes in an ablation medium. In one embodiment, the method includes the steps of preparing a sample having analytes in a medium including at least one component, freezing the sample at a sufficiently low temperature so that at least part of the sample has a phase transition, and irradiating the frozen sample with short-pulse radiation to cause medium ablation and desorption and ionization of the analytes. The method further includes the steps of selecting a resonant vibrational mode of at least one component of the medium and selecting an energy source tuned to emit radiation substantially at the wavelength of the selected resonant vibrational mode. The medium is an electrophoresis medium having polyacrylamide. In one embodiment, the energy source is a laser, where the laser can be a free electron laser tunable to generate short-pulse radiation. Alternatively, the laser can be a solid state laser tunable to generate short-pulse radiation. The laser can emit light at various ranges of wavelength.

Inventors:
; ;
Issue Date:
Research Org.:
Vanderbilt Univ., Nashville, TN (United States)
Sponsoring Org.:
USDOE
OSTI Identifier:
1175157
Patent Number(s):
6825045
Application Number:
09/931,490
Assignee:
Vanderbilt University
Patent Classifications (CPCs):
G - PHYSICS G01 - MEASURING G01N - INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
H - ELECTRICITY H01 - BASIC ELECTRIC ELEMENTS H01J - ELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
Resource Type:
Patent
Country of Publication:
United States
Language:
English
Subject:
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND TECHNOLOGY

Citation Formats

Haglund, Jr., Richard F., Ermer, David R., and Baltz-Knorr, Michelle Lee. System and method of infrared matrix-assisted laser desorption/ionization mass spectrometry in polyacrylamide gels. United States: N. p., 2004. Web.
Haglund, Jr., Richard F., Ermer, David R., & Baltz-Knorr, Michelle Lee. System and method of infrared matrix-assisted laser desorption/ionization mass spectrometry in polyacrylamide gels. United States.
Haglund, Jr., Richard F., Ermer, David R., and Baltz-Knorr, Michelle Lee. Tue . "System and method of infrared matrix-assisted laser desorption/ionization mass spectrometry in polyacrylamide gels". United States. https://www.osti.gov/servlets/purl/1175157.
@article{osti_1175157,
title = {System and method of infrared matrix-assisted laser desorption/ionization mass spectrometry in polyacrylamide gels},
author = {Haglund, Jr., Richard F. and Ermer, David R. and Baltz-Knorr, Michelle Lee},
abstractNote = {A system and method for desorption and ionization of analytes in an ablation medium. In one embodiment, the method includes the steps of preparing a sample having analytes in a medium including at least one component, freezing the sample at a sufficiently low temperature so that at least part of the sample has a phase transition, and irradiating the frozen sample with short-pulse radiation to cause medium ablation and desorption and ionization of the analytes. The method further includes the steps of selecting a resonant vibrational mode of at least one component of the medium and selecting an energy source tuned to emit radiation substantially at the wavelength of the selected resonant vibrational mode. The medium is an electrophoresis medium having polyacrylamide. In one embodiment, the energy source is a laser, where the laser can be a free electron laser tunable to generate short-pulse radiation. Alternatively, the laser can be a solid state laser tunable to generate short-pulse radiation. The laser can emit light at various ranges of wavelength.},
doi = {},
journal = {},
number = ,
volume = ,
place = {United States},
year = {Tue Nov 30 00:00:00 EST 2004},
month = {Tue Nov 30 00:00:00 EST 2004}
}

Works referenced in this record:

High sensitivity mass spectrometric methods for obtaining intact molecular weights from gel-separated proteins
journal, January 1999


Mass Spectrometry of Proteins Directly from Polyacrylamide Gels
journal, January 1996


Matrix-assisted laser desorption ionization mass spectrometry of proteins electroblotted after polyacrylamide gel electrophoresis
journal, February 1994


Sensitivity and mass accuracy for proteins analyzed directly from polyacrylamide gels: Implications for proteome mapping
journal, January 1997


Matrix-assisted laser desorption and ionization in the OH and CO absorption bands of aliphatic and aromatic matrices: dependence on laser wavelength and temporal beam profile
journal, December 1997


Explosive vaporization in fused silica initiated by a tunable infrared laser
journal, December 2000


Free-electron lasers: reliability, performance, and beam delivery
journal, January 1996


Charged-particle emission from dielectric materials initiated by a tunable picosecond mid-infrared laser
conference, March 2000

  • Ermer, David R.; Papantonakis, Michael R.; Baltz-Knorr, Michelle
  • Symposium on High-Power Lasers and Applications, SPIE Proceedings
  • https://doi.org/10.1117/12.380797

Free-Electron Lasers
journal, March 1988


Broadband Pockels cell and driver for a Mark III‐type free electron laser
journal, May 1994


Identification of proteins in polyacrylamide gels by mass spectrometric peptide mapping combined with database search
journal, May 1994


Proteomics: quantitative and physical mapping of cellular proteins
journal, March 1999


Characterization of SDS−PAGE-Separated Proteins by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry
journal, January 1996


Thin-layer chromatography/laser desorption of peptides followed by multiphoton ionization time-of-flight mass spectrometry
journal, February 1995


Analysis of Proteins by Direct-Scanning Infrared- MALDI Mass Spectrometry after 2D-PAGE Separation and Electroblotting
journal, August 1997


IR-MALDI of low molecular weight compounds using a free electron laser
journal, May 1998


Identifying proteins from two-dimensional gels by molecular mass searching of peptide fragments in protein sequence databases.
journal, June 1993