Title: Physical-chemical property based sequence motifs and methods regarding same

Abstract

A data analysis system, program, and/or method, e.g., a data mining/data exploration method, using physical-chemical property motifs. For example, a sequence database may be searched for identifying segments thereof having physical-chemical properties similar to the physical-chemical property motifs.

Inventors:

Braun, Werner ^[1]; Mathura, Venkatarajan S ^[2]; Schein, Catherine H ^[1]

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+ Show Inventor Affiliations

1. Friendswood, TX
2. Sarasota, FL

Issue Date:

Tue Sep 09 00:00:00 EDT 2008

Research Org.:

University of Texas

Sponsoring Org.:

USDOE

OSTI Identifier:

984949

Patent Number(s):

7424369

Application Number:

10/817,530

Assignee:

Board of Regents, The University of Texas System (Austin, TX)

Patent Classifications (CPCs):

G - PHYSICS G16 - INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS G16B - BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY

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G - PHYSICS G16 - INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS G16B - BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY

G16B20/00 - ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
G16B20/30 - Detection of binding sites or motifs
G16B30/00 - ICT specially adapted for sequence analysis involving nucleotides or amino acids
G16B30/10 - Sequence alignment

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DOE Contract Number:  

FG03-00ER63041; FG02-04ER63826

Resource Type:

Patent

Country of Publication:

United States

Language:

English

Subject:

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY