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Title: Method for nucleic acid hybridization using single-stranded DNA binding protein

Abstract

Method of nucleic acid hybridization for detecting the presence of a specific nucleic acid sequence in a population of different nucleic acid sequences using a nucleic acid probe. The nucleic acid probe hybridizes with the specific nucleic acid sequence but not with other nucleic acid sequences in the population. The method includes contacting a sample (potentially including the nucleic acid sequence) with the nucleic acid probe under hybridizing conditions in the presence of a single-stranded DNA binding protein provided in an amount which stimulates renaturation of a dilute solution (i.e., one in which the t.sub.1/2 of renaturation is longer than 3 weeks) of single-stranded DNA greater than 500 fold (i.e., to a t.sub.1/2 less than 60 min, preferably less than 5 min, and most preferably about 1 min.) in the absence of nucleotide triphosphates.

Inventors:
 [1];  [2]
  1. Cambridge, MA
  2. Chestnut Hill, MA
Issue Date:
Research Org.:
Harvard University
OSTI Identifier:
870501
Patent Number(s):
5534407
Assignee:
President and Fellows of Harvard College (Cambridge, MA)
Patent Classifications (CPCs):
C - CHEMISTRY C12 - BIOCHEMISTRY C12Q - MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS
DOE Contract Number:  
FG02-88ER60688
Resource Type:
Patent
Country of Publication:
United States
Language:
English
Subject:
method; nucleic; acid; hybridization; single-stranded; dna; binding; protein; detecting; presence; specific; sequence; population; sequences; probe; hybridizes; contacting; sample; potentially; including; hybridizing; conditions; provided; amount; stimulates; renaturation; dilute; solution; weeks; 500; fold; 60; preferably; absence; nucleotide; triphosphates; stranded dna; acid hybridization; dilute solution; binding protein; acid sequence; nucleic acid; acid sequences; acid probe; specific nucleic; single-stranded dna; dna binding; /435/

Citation Formats

Tabor, Stanley, and Richardson, Charles C. Method for nucleic acid hybridization using single-stranded DNA binding protein. United States: N. p., 1996. Web.
Tabor, Stanley, & Richardson, Charles C. Method for nucleic acid hybridization using single-stranded DNA binding protein. United States.
Tabor, Stanley, and Richardson, Charles C. Mon . "Method for nucleic acid hybridization using single-stranded DNA binding protein". United States. https://www.osti.gov/servlets/purl/870501.
@article{osti_870501,
title = {Method for nucleic acid hybridization using single-stranded DNA binding protein},
author = {Tabor, Stanley and Richardson, Charles C},
abstractNote = {Method of nucleic acid hybridization for detecting the presence of a specific nucleic acid sequence in a population of different nucleic acid sequences using a nucleic acid probe. The nucleic acid probe hybridizes with the specific nucleic acid sequence but not with other nucleic acid sequences in the population. The method includes contacting a sample (potentially including the nucleic acid sequence) with the nucleic acid probe under hybridizing conditions in the presence of a single-stranded DNA binding protein provided in an amount which stimulates renaturation of a dilute solution (i.e., one in which the t.sub.1/2 of renaturation is longer than 3 weeks) of single-stranded DNA greater than 500 fold (i.e., to a t.sub.1/2 less than 60 min, preferably less than 5 min, and most preferably about 1 min.) in the absence of nucleotide triphosphates.},
doi = {},
journal = {},
number = ,
volume = ,
place = {United States},
year = {Mon Jan 01 00:00:00 EST 1996},
month = {Mon Jan 01 00:00:00 EST 1996}
}

Works referenced in this record:

On the mechanism of renaturation of complementary DNA strands by the recA protein of Escherichia coli.
journal, January 1985


A Deoxyribonucleic Acid-Binding Protein Induced by Bacteriophage T7
journal, June 1974


Escherichia coli thioredoxin confers processivity on the DNA polymerase activity of the gene 5 protein of bacteriophage T7.
journal, November 1987


The effect of the T7 and Escherichia coli DNA-binding proteins at the replication fork of bacteriophage T7.
journal, July 1988


Nucleotide sequence from the genetic left end of bacteriophage T7 DNA to the beginning of gene 4
journal, June 1981


The homologous recombination system of phage lambda. Pairing activities of beta protein.
journal, June 1986


T4 Bacteriophage Gene 32: A Structural Protein in the Replication and Recombination of DNA
journal, September 1970


Studies on bacteriophage T7 DNA synthesis in vitro: II. Reconstitution of the T7 replication system using purified proteins
journal, September 1975


A T7 amber mutant defective in DNA-Binding protein
journal, September 1981


Catalysis of DNA reassociation by the Escherichia coli DNA binding protein
journal, September 1977


Selective Inactivation of the Exonuclease Activity of Bacteriophage T7 DNA Polymerase by in Vitro Mutagenesis
journal, April 1989


Genetic Recombination of Bacteriophage T7 DNA in Vitro
book, January 1980


ATP-dependent renaturation of DNA catalyzed by the recA protein of Escherichia coli.
journal, January 1979


Processing of concatemers of bacteriophage T7 DNA in vitro.
journal, June 1987


The participation of T7 DNA-binding protein in T7 genetic recombination
journal, June 1981


Primary structural relationships may reflect similar DNA replication strategies
journal, March 1986


Beta protein of bacteriophage lambda promotes renaturation of DNA.
journal, December 1981


DNA sequence analysis with a modified bacteriophage T7 DNA polymerase.
journal, July 1987


A DNA-Binding Protein Induced by Bacteriophage T7
journal, June 1973


Stimulation of T7 DNA polymerase by a new phage-coded protein
journal, September 1973