Synthesis and oxidation of methane
Abstract
The present disclosure describes genes and proteins of the coenzyme F430 synthetic pathway. The genes and proteins in the pathway find uses as isolated nucleic acids, transformation vectors, a transformation media, genetically modified cells, methods of modulating methanogenesis, methods of modulating methane oxidation, methods of making a tetrapyrrole compound, methods of oxidizing methane, methods of biogenic methane synthesis is provided, methods of assaying an organism for potential methanogenic or methanotrophic activity, and isolated proteins.
- Inventors:
- Issue Date:
- Research Org.:
- Auburn Univ., AL (United States)
- Sponsoring Org.:
- USDOE Advanced Research Projects Agency - Energy (ARPA-E)
- OSTI Identifier:
- 1771468
- Patent Number(s):
- 10793863
- Application Number:
- 15/588,396
- Assignee:
- Auburn University (Auburn, AL)
- Patent Classifications (CPCs):
-
C - CHEMISTRY C12 - BIOCHEMISTRY C12N - MICROORGANISMS OR ENZYMES
C - CHEMISTRY C12 - BIOCHEMISTRY C12P - FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE {
- DOE Contract Number:
- AR0000428; AR0000433
- Resource Type:
- Patent
- Resource Relation:
- Patent File Date: 05/05/2017
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; 10 SYNTHETIC FUELS; 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
Citation Formats
Mansoorabadi, Steven. Synthesis and oxidation of methane. United States: N. p., 2020.
Web.
Mansoorabadi, Steven. Synthesis and oxidation of methane. United States.
Mansoorabadi, Steven. Tue .
"Synthesis and oxidation of methane". United States. https://www.osti.gov/servlets/purl/1771468.
@article{osti_1771468,
title = {Synthesis and oxidation of methane},
author = {Mansoorabadi, Steven},
abstractNote = {The present disclosure describes genes and proteins of the coenzyme F430 synthetic pathway. The genes and proteins in the pathway find uses as isolated nucleic acids, transformation vectors, a transformation media, genetically modified cells, methods of modulating methanogenesis, methods of modulating methane oxidation, methods of making a tetrapyrrole compound, methods of oxidizing methane, methods of biogenic methane synthesis is provided, methods of assaying an organism for potential methanogenic or methanotrophic activity, and isolated proteins.},
doi = {},
journal = {},
number = ,
volume = ,
place = {United States},
year = {2020},
month = {10}
}
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Works referenced in this record:
Biosynthesis of coenzyme F430 in methanogenic bacteria. Identification of 15,173-seco-F430-173-acid as an intermediate
journal, December 1987
- Pfaltz, Andreas; Kobelt, Andre; Huster, Rudolf
- European Journal of Biochemistry, Vol. 170, Issue 1-2
Molecular Evolution of Nitrogen Fixation: The Evolutionary History of the nifD, nifK, nifE, and nifN Genes
journal, July 2000
- Fani, Renato; Gallo, Romina; Liò, Pietro
- Journal of Molecular Evolution, Vol. 51, Issue 1
Complete genome sequence of the methanogen Methanobrevibacter ruminantium
patent, June 2019
- Altermann, Eric Heinz; Attwood, Graeme Trevor; Cook, Gregory
- US Patent Document 10,314,895
Elucidating the Process of Activation of Methyl-Coenzyme M Reductase
journal, April 2014
- Prakash, D.; Wu, Y.; Suh, S. -J.
- Journal of Bacteriology, Vol. 196, Issue 13
X-ray crystal structure of the light-independent protochlorophyllide reductase
journal, May 2010
- Muraki, Norifumi; Nomata, Jiro; Ebata, Kozue
- Nature, Vol. 465, Issue 7294
Catalytic conversion of methane to more useful chemicals and fuels: a challenge for the 21st century
journal, December 2000
- Lunsford, Jack H.
- Catalysis Today, Vol. 63, Issue 2-4, p. 165-174
Mechanism of Cobyrinic Acid a , c -Diamide Synthetase from Salmonella typhimurium LT2 †
journal, August 2004
- Fresquet, Vicente; Williams, LaKenya; Raushel, Frank M.
- Biochemistry, Vol. 43, Issue 33
More Than 200 Genes Required for Methane Formation from H 2 and CO 2 and Energy Conservation Are Present in Methanothermobacter marburgensis and Methanothermobacter thermautotrophicus
journal, January 2011
- Kaster, Anne-Kristin; Goenrich, Meike; Seedorf, Henning
- Archaea, Vol. 2011
Anaerobic Oxidation of Methane: Progress with an Unknown Process
journal, October 2009
- Knittel, Katrin; Boetius, Antje
- Annual Review of Microbiology, Vol. 63, Issue 1
Methane oxidation by anaerobic archaea for conversion to liquid fuels
journal, November 2014
- Mueller, Thomas J.; Grisewood, Matthew J.; Nazem-Bokaee, Hadi
- Journal of Industrial Microbiology & Biotechnology, Vol. 42, Issue 3
The Methanosarcina barkeri Genome: Comparative Analysis with Methanosarcina acetivorans and Methanosarcina mazei Reveals Extensive Rearrangement within Methanosarcinal Genomes
journal, September 2006
- Maeder, D. L.; Anderson, I.; Brettin, T. S.
- Journal of Bacteriology, Vol. 188, Issue 22
A Story of Chelatase Evolution: IDENTIFICATION AND CHARACTERIZATION OF A SMALL 13–15-kDa “ANCESTRAL” COBALTOCHELATASE (CbiX S ) IN THE ARCHAEA
journal, April 2003
- Brindley, Amanda A.; Raux, Evelyne; Leech, Helen K.
- Journal of Biological Chemistry, Vol. 278, Issue 25
The Genome of M. acetivorans Reveals Extensive Metabolic and Physiological Diversity
journal, April 2002
- Galagan, J. E.
- Genome Research, Vol. 12, Issue 4
Nucleotide sequence of the methyl coenzyme M reductase gene cluster from Methanosarcina barkeri
journal, January 1987
- Bokranz, Martin; Klein, Albrecht
- Nucleic Acids Research, Vol. 15, Issue 10
Methanogenic archaea: ecologically relevant differences in energy conservation
journal, June 2008
- Thauer, Rudolf K.; Kaster, Anne-Kristin; Seedorf, Henning
- Nature Reviews Microbiology, Vol. 6, Issue 8
Characterization of the cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium.
journal, June 1993
- Roth, J. R.; Lawrence, J. G.; Rubenfield, M.
- Journal of Bacteriology, Vol. 175, Issue 11
An enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis
journal, October 2012
- Deery, Evelyne; Schroeder, Susanne; Lawrence, Andrew D.
- Nature Chemical Biology, Vol. 8, Issue 11
Common Chelatase Design in the Branched Tetrapyrrole Pathways of Heme and Anaerobic Cobalamin Synthesis †
journal, August 1999
- Schubert, Heidi L.; Raux, Evelyne; Wilson, Keith S.
- Biochemistry, Vol. 38, Issue 33
Structure of ADP·AIF4–-stabilized nitrogenase complex and its implications for signal transduction
journal, May 1997
- Schindelin, Hermann; Kisker, Caroline; Schlessman, Jamie L.
- Nature, Vol. 387, Issue 6631
Genome-scale analysis of gene function in the hydrogenotrophic methanogenic archaeon Methanococcus maripaludis
journal, March 2013
- Sarmiento, F.; Mrazek, J.; Whitman, W. B.
- Proceedings of the National Academy of Sciences, Vol. 110, Issue 12
Enzymatic synthesis of dihydrosirohydrochlorin (precorrin-2) and of a novel pyrrocorphin by uroporphyrinogen III methylase
journal, February 1990
- Warren, Martin J.; Stolowich, Neal J.; Santander, Patricio J.
- FEBS Letters, Vol. 261, Issue 1
The Genome Sequence of the Rumen Methanogen Methanobrevibacter ruminantium Reveals New Possibilities for Controlling Ruminant Methane Emissions
journal, January 2010
- Leahy, Sinead C.; Kelly, William J.; Altermann, Eric
- PLoS ONE, Vol. 5, Issue 1
Over-production, purification and properties of the uridine diphosphate N-acetylmuramoyl-l-alanine: d-glutamate ligase from Escherichia coli
journal, December 1991
- Pratviel-Sosa, Flore; Mengin-Lecreulx, Dominique; Heijenoort, Jean
- European Journal of Biochemistry, Vol. 202, Issue 3
Identification of the mcrD gene product and its association with component C of methyl coenzyme M reductase in Methanococcus vannielii.
journal, January 1990
- Sherf, B. A.; Reeve, J. N.
- Journal of Bacteriology, Vol. 172, Issue 4
BIOCHEMISTRY: Methane: Small Molecule, Big Impact
journal, November 1997
- Ferry, J. G.
- Science, Vol. 278, Issue 5342
Crystal Structure of Methyl-Coenzyme M Reductase: The Key Enzyme of Biological Methane Formation
journal, November 1997
- Ermler, U.
- Science, Vol. 278, Issue 5342
The biosynthetic pathway of coenzyme F430 in methanogenic and methanotrophic archaea
journal, October 2016
- Zheng, Kaiyuan; Ngo, Phong D.; Owens, Victoria L.
- Science, Vol. 354, Issue 6310
Sirohydrochlorin, a precursor of factor F 430 biosynthesis in Methanobacterium thermoautotrophicum
journal, October 1985
- Mucha, Helmut; Keller, Eberhard; Weber, Hans
- FEBS Letters, Vol. 190, Issue 1
Biosynthetic evidence for a nickel tetrapyrrole structure of factor F 430 from Methanobacterium thermoautotrophicum
journal, September 1980
- Diekert, Gabriele; Jaenchen, Rolf; Thauer, Rudolf K.
- FEBS Letters, Vol. 119, Issue 1
The key nickel enzyme of methanogenesis catalyses the anaerobic oxidation of methane
journal, June 2010
- Scheller, Silvan; Goenrich, Meike; Boecher, Reinhard
- Nature, Vol. 465, Issue 7298
Production of cobalamin and sirohaem in Bacillus megaterium: an investigation into the role of the branchpoint chelatases sirohydrochlorin ferrochelatase (SirB) and sirohydrochlorin cobalt chelatase (CbiX)
journal, August 2002
- Leech, H. K.; Raux-Deery, E.; Heathcote, P.
- Biochemical Society Transactions, Vol. 30, Issue 4
The biology of Mur ligases as an antibacterial target: The biology of Mur ligases as an antibacterial target
journal, September 2014
- Kouidmi, Imène; Levesque, Roger C.; Paradis-Bleau, Catherine
- Molecular Microbiology, Vol. 94, Issue 2
Expression and Association of Group IV Nitrogenase NifD and NifH Homologs in the Non-Nitrogen-Fixing Archaeon Methanocaldococcus jannaschii
journal, July 2007
- Staples, C. R.; Lahiri, S.; Raymond, J.
- Journal of Bacteriology, Vol. 189, Issue 20