Thermophilic and thermoacidophilic biopolymer degrading genes and enzymes from Alicyclobacillus acidocaldarius and related organisms, methods

Thompson, David N; Apel, William A; Thompson, Vicki S; Reed, David W; Lacey, Jeffrey A; Henriksen, Emily D.

Title: Thermophilic and thermoacidophilic biopolymer degrading genes and enzymes from Alicyclobacillus acidocaldarius and related organisms, methods

Abstract

Isolated and/or purified polypeptides and nucleic acid sequences encoding polypeptides from Alicyclobacillus acidocaldarius are provided. Further provided are methods of at least partially degrading, cleaving, or removing polysaccharides, lignocellulose, cellulose, hemicellulose, lignin, starch, chitin, polyhydroxybutyrate, heteroxylans, glycosides, xylan-, glucan-, galactan-, or mannan-decorating groups using isolated and/or purified polypeptides and nucleic acid sequences encoding polypeptides from Alicyclobacillus acidocaldarius.

Inventors:: Thompson, David N; Apel, William A; Thompson, Vicki S; Reed, David W; Lacey, Jeffrey A; Henriksen, Emily D.

Issue Date:: 2016-08-02

Research Org.:: Idaho National Laboratory (INL), Idaho Falls, ID (United States)

Sponsoring Org.:: USDOE

OSTI Identifier:: 1281833

Patent Number(s):: 9404134

Application Number:: 14/727,653

Assignee:: Battelle Energy Alliance, LLC (Idaho Falls, ID)

Patent Classifications (CPCs):: C - CHEMISTRY C12 - BIOCHEMISTRY C12N - MICROORGANISMS OR ENZYMES

C - CHEMISTRY C12 - BIOCHEMISTRY C12P - FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE {

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C - CHEMISTRY C12 - BIOCHEMISTRY C12N - MICROORGANISMS OR ENZYMES
C12N15/52 - Genes encoding for enzymes or proenzymes
C12N9/1051 - {Hexosyltransferases
C12N9/16 - acting on ester bonds
C12N9/18 - Carboxylic ester hydrolases {
C12N9/2402 - {hydrolysing O- and S- glycosyl compounds
C12N9/2408 - {acting on alpha -1,4-glucosidic bonds}
C12N9/2428 - {Glucan 1,4-alpha-glucosidase
C12N9/2434 - {acting on beta-1,4-glucosidic bonds}
C12N9/2437 - {Cellulases
C12N9/2445 - {Beta-glucosidase
C12N9/2465 - {acting on alpha-galactose-glycoside bonds, e.g. alpha-galactosidase
C12N9/2471 - {Beta-galactosidase
C12N9/248 - {Xylanases}
C12N9/2482 - {Endo-1,4-beta-xylanase
C12N9/2494 - {Mannan endo-1,4-beta-mannosidase
C12N9/80 - acting on amide bonds in linear amides {
C12N9/88 - Lyases

C - CHEMISTRY C12 - BIOCHEMISTRY C12P - FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE {
C12P19/00 - Preparation of compounds containing saccharide radicals
C12P19/02 - Monosaccharides
C12P19/14 - produced by the action of a carbohydrase {

C - CHEMISTRY C12 - BIOCHEMISTRY C12Y - ENZYMES
C12Y204/0102 - Cellobiose phosphorylase
C12Y301/01001 - Carboxylesterase
C12Y301/01006 - Acetylesterase
C12Y301/01073 - Feruloyl esterase
C12Y301/02004 - 3-Hydroxyisobutyryl-CoA hydrolase
C12Y302/01008 - Endo-1,4-beta-xylanase
C12Y302/01015 - Polygalacturonase
C12Y302/0102 - Alpha-glucosidase
C12Y302/01021 - Beta-glucosidase
C12Y302/01022 - Alpha-galactosidase
C12Y302/01037 - Xylan 1,4-beta-xylosidase
C12Y302/01055 - Alpha-N-arabinofuranosidase
C12Y302/01078 - Mannan endo-1,4-beta-mannosidase
C12Y302/01091 - Cellulose 1,4-beta-cellobiosidase
C12Y302/01131 - Xylan alpha-1,2-glucuronosidase
C12Y302/01133 - Glucan 1,4-alpha-maltohydrolase
C12Y302/01139 - Alpha-glucuronidase
C12Y305/01 - in linear amides
C12Y402/01007 - Altronate dehydratase
C12Y402/01008 - Mannonate dehydratase

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DOE Contract Number:: AC07-99ID13727; AC07-05ID14517

Resource Type:: Patent

Resource Relation:: Patent File Date: 2015 Jun 01

Country of Publication:: United States

Language:: English

Subject:: 59 BASIC BIOLOGICAL SCIENCES; 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY

Citation Formats


                    Thompson, David N, Apel, William A, Thompson, Vicki S, Reed, David W, Lacey, Jeffrey A, and Henriksen, Emily D. Thermophilic and thermoacidophilic biopolymer degrading genes and enzymes from Alicyclobacillus acidocaldarius and related organisms, methods.  United States: N. p., 2016. 
        Web.

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                    Thompson, David N, Apel, William A, Thompson, Vicki S, Reed, David W, Lacey, Jeffrey A, & Henriksen, Emily D. Thermophilic and thermoacidophilic biopolymer degrading genes and enzymes from Alicyclobacillus acidocaldarius and related organisms, methods.  United States.

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                    Thompson, David N, Apel, William A, Thompson, Vicki S, Reed, David W, Lacey, Jeffrey A, and Henriksen, Emily D. Tue .  
        "Thermophilic and thermoacidophilic biopolymer degrading genes and enzymes from Alicyclobacillus acidocaldarius and related organisms, methods".  United States.  https://www.osti.gov/servlets/purl/1281833.

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@article{osti_1281833,

  title        = {Thermophilic and thermoacidophilic biopolymer degrading genes and enzymes from Alicyclobacillus acidocaldarius and related organisms, methods},

  author       = {Thompson, David N and Apel, William A and Thompson, Vicki S and Reed, David W and Lacey, Jeffrey A and Henriksen, Emily D.},

  abstractNote = {Isolated and/or purified polypeptides and nucleic acid sequences encoding polypeptides from Alicyclobacillus acidocaldarius are provided. Further provided are methods of at least partially degrading, cleaving, or removing polysaccharides, lignocellulose, cellulose, hemicellulose, lignin, starch, chitin, polyhydroxybutyrate, heteroxylans, glycosides, xylan-, glucan-, galactan-, or mannan-decorating groups using isolated and/or purified polypeptides and nucleic acid sequences encoding polypeptides from Alicyclobacillus acidocaldarius.},

  doi          = {},

  journal      = {},
number       = ,

  volume       = ,

  place        = {United States},

  year         = {2016},

  month        = {8}

}

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