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Title: Multiplexed microfluidic approach for nucleic acid enrichment

Abstract

A system for enhancing a nucleic acid sample may include a one pump, a denaturing chamber; a microfluidic hydroxyapatite chromatography device configured for performing hydroxyapatite chromatography on the nucleic acid sample, a sample collector, and tubing connecting the pump with the denaturing chamber, the hydroxyapatite chromatography device and the sample collector such that the pump may be used to move the nucleic acid sample from the denaturing chamber to the hydroxyapatite chromatography device and then to the sample collector.

Inventors:
; ; ; ; ; ; ; ;
Issue Date:
Research Org.:
Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)
Sponsoring Org.:
USDOE
OSTI Identifier:
1248895
Patent Number(s):
9322014
Application Number:
14/084,937
Assignee:
Sandia Corporation (Albuquerque, NM)
Patent Classifications (CPCs):
C - CHEMISTRY C12 - BIOCHEMISTRY C12N - MICROORGANISMS OR ENZYMES
C - CHEMISTRY C12 - BIOCHEMISTRY C12Q - MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS
DOE Contract Number:  
AC04-94AL85000
Resource Type:
Patent
Resource Relation:
Patent File Date: 2013 Nov 20
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY

Citation Formats

VanderNoot, Victoria A., Langevin, Stanley Alan, Bent, Zachary, Renzi, Ronald F., Ferko, Scott M., Van De Vreugde, James L., Lane, Todd, Patel, Kamlesh, and Branda, Steven. Multiplexed microfluidic approach for nucleic acid enrichment. United States: N. p., 2016. Web.
VanderNoot, Victoria A., Langevin, Stanley Alan, Bent, Zachary, Renzi, Ronald F., Ferko, Scott M., Van De Vreugde, James L., Lane, Todd, Patel, Kamlesh, & Branda, Steven. Multiplexed microfluidic approach for nucleic acid enrichment. United States.
VanderNoot, Victoria A., Langevin, Stanley Alan, Bent, Zachary, Renzi, Ronald F., Ferko, Scott M., Van De Vreugde, James L., Lane, Todd, Patel, Kamlesh, and Branda, Steven. Tue . "Multiplexed microfluidic approach for nucleic acid enrichment". United States. https://www.osti.gov/servlets/purl/1248895.
@article{osti_1248895,
title = {Multiplexed microfluidic approach for nucleic acid enrichment},
author = {VanderNoot, Victoria A. and Langevin, Stanley Alan and Bent, Zachary and Renzi, Ronald F. and Ferko, Scott M. and Van De Vreugde, James L. and Lane, Todd and Patel, Kamlesh and Branda, Steven},
abstractNote = {A system for enhancing a nucleic acid sample may include a one pump, a denaturing chamber; a microfluidic hydroxyapatite chromatography device configured for performing hydroxyapatite chromatography on the nucleic acid sample, a sample collector, and tubing connecting the pump with the denaturing chamber, the hydroxyapatite chromatography device and the sample collector such that the pump may be used to move the nucleic acid sample from the denaturing chamber to the hydroxyapatite chromatography device and then to the sample collector.},
doi = {},
journal = {},
number = ,
volume = ,
place = {United States},
year = {Tue Apr 26 00:00:00 EDT 2016},
month = {Tue Apr 26 00:00:00 EDT 2016}
}

Works referenced in this record:

Gene Expression in Mouse Oocytes by RNA-Seq
book, December 2011


Generation of Multimillion-Sequence 16S rRNA Gene Libraries from Complex Microbial Communities by Assembling Paired-End Illumina Reads
journal, April 2011


Size Exclusion Chromatography of Microliter Volumes for On-Line Use in Low-Pressure Microfluidic Systems
journal, August 2006


Exome-wide DNA capture and next generation sequencing in domestic and wild species
journal, July 2011


Uncovering the Complexity of Transcriptomes with RNA-Seq
journal, January 2010


Rare target enrichment for ultrasensitive PCR detection using cot–rehybridization and duplex-specific nuclease
journal, February 2012


Automated analysis of mouse serum peptidome using restricted access media and nanoliquid chromatography–tandem mass spectrometry
journal, May 2011


An ‘equalized cDNA library’ by the reassociation of short double-stranded cDNAs
journal, January 1990


RNA sequencing: advances, challenges and opportunities
journal, December 2010


Review Application of RNA-seq to reveal the transcript profile in bacteria
journal, January 2011


Identification of novel transcripts in annotated genomes using RNA-Seq
journal, June 2011


Normalization of cDNA Libraries
book, January 2007


Construction and characterization of a normalized cDNA library.
journal, September 1994


Autonomous Microfluidic Sample Preparation System for Protein Profile-Based Detection of Aerosolized Bacterial Cells and Spores
journal, August 2007


Enriching pathogen transcripts from infected samples: A capture-based approach to enhanced host–pathogen RNA sequencing
journal, July 2013


Normalizing cDNA Libraries
journal, April 2010


Repeated Sequences in DNA
journal, August 1968


Separation of Single-stranded DNA, Double-stranded DNA and RNA from an Environmental Viral Community Using Hydroxyapatite Chromatography
journal, January 2011

  • Fadrosh, Douglas W.; Andrews-Pfannkoch, Cynthia; Williamson, Shannon J.
  • Journal of Visualized Experiments, Issue 55
  • https://doi.org/10.3791/3146

Microchip separations of protein biotoxins using an integrated hand-held device
journal, March 2005


Comprehensive comparative analysis of strand-specific RNA sequencing methods
journal, August 2010


cDNA selection: efficient PCR approach for the selection of cDNAs encoded in large chromosomal DNA fragments.
journal, November 1991


Construction of a uniform-abundance (normalized) cDNA library.
journal, March 1991


Hand-Held Microanalytical Instrument for Chip-Based Electrophoretic Separations of Proteins
journal, January 2005


Modeling biominerals formed by apatites and DNA
journal, December 2013


Application for PCR technology to subtractive cDNA cloning: identification of genes expressed specifically in murine plasmacytoma cells
journal, January 1990


On-line monitoring system for chemical warfare agents using automated capillary micellar electrokinetic chromatography
journal, August 2012


populacDNA normalization by hydroxyapatite chromatography to enrich transcriptome diversity in RNA-seq applications
journal, December 2012


Development of an integrated microfluidic instrument for unattended water-monitoring applications
journal, July 2010


Method for construction of normalized cDNA libraries
patent, January 1996


Procedure for normalization of cDNA libraries
patent, December 1997


Production and use of normalized DNA libraries
patent, September 2002


Portable apparatus for separating sample and detecting target analytes
patent, November 2008