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  <codeId>33325</codeId>
  <siteOwnershipCode>LBNL</siteOwnershipCode>
  <openSource>true</openSource>
  <repositoryLink>https://github.com/m-gul/GPU-BSW</repositoryLink>
  <projectType>OS</projectType>
  <softwareType>S</softwareType>
  <officialUseOnly/>
  <releaseDate>2019-11-14</releaseDate>
  <softwareTitle>A Domain indEpendent sequence alignment strategy for gPu archiTectures (ADEPT) v1.0</softwareTitle>
  <acronym>GPU accelerated Smith-Waterman for performing batch alignments</acronym>
  <doi>https://doi.org/10.11578/dc.20191223.1</doi>
  <description>GPU-BSW is a version of Smith-Waterman alignment algorithm which has been optimized to perform large number of sequence alignments on GPUs.</description>
  <countryOfOrigin>United States</countryOfOrigin>
  <recipientOrg>LBNL</recipientOrg>
  <siteAccessionNumber>2020-006</siteAccessionNumber>
  <dateRecordAdded>2019-12-23</dateRecordAdded>
  <dateRecordUpdated>2021-07-22</dateRecordUpdated>
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      <email>KAYelick@lbl.gov</email>
      <orcid></orcid>
      <firstName>Katherine</firstName>
      <lastName>Yelick</lastName>
      <middleName>A</middleName>
      <affiliations>
        <affiliation>Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)</affiliation>
      </affiliations>
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    <developer>
      <email>LOliker@lbl.gov</email>
      <orcid></orcid>
      <firstName>Leonid</firstName>
      <lastName>Oliker</lastName>
      <middleName></middleName>
      <affiliations>
        <affiliation>Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)</affiliation>
      </affiliations>
    </developer>
    <developer>
      <email>MGAwan@lbl.gov</email>
      <orcid></orcid>
      <firstName>Muaaz Gul</firstName>
      <lastName>Awan</lastName>
      <middleName></middleName>
      <affiliations>
        <affiliation>Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)</affiliation>
      </affiliations>
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      <organizationName>USDOE</organizationName>
      <primaryAward>AC02-05CH11231</primaryAward>
      <DOE>true</DOE>
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          <identifierValue>ORNL No. DE-AC05-00OR22725</identifierValue>
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    <license>BSD 3-clause "New" or "Revised" License</license>
  </licenses>
  <links>
    <link rel="citation" href="https://www.osti.gov/doecode/biblio/33325"/>
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