Abstract
The Thermo Raw File Reader is a .NET DLL wrapper for Thermo's MS File Reader, which is accessible by creating an account at https://thermo.flexnetoperations.com/control/thmo/login then logging in and choosing "Utility Software". The Thermo Raw File Reader DLL provides several methods for parsing the information returned by MSFileReader, including: Determining the parent ion m/z and fragmentation mode in a given scan filter, determining the Ionization mode from a given scan filter, extracting MRM masses listed in a given scan filter, reporting the number of spectra in the .Raw file, returning details on a specific spectrum, and Obtaining the raw m/z and intensity values for a given spectrum.
- Developers:
-
Gibbons, Bryson ; Monroe, Matthew [1]
- Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
- Release Date:
- 2018-02-21
- Project Type:
- Open Source, Publicly Available Repository
- Software Type:
- Scientific
- Licenses:
-
Apache License 2.0
- Sponsoring Org.:
-
USDOEPrimary Award/Contract Number:AC05-76RL01830
- Code ID:
- 8636
- Research Org.:
- Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
- Country of Origin:
- United States
Citation Formats
Gibbons, Bryson, and Monroe, Matthew.
Thermo Raw File Reader.
Computer Software.
https://github.com/PNNL-Comp-Mass-Spec/Thermo-Raw-File-Reader.
USDOE.
21 Feb. 2018.
Web.
doi:10.11578/dc.20180319.71.
Gibbons, Bryson, & Monroe, Matthew.
(2018, February 21).
Thermo Raw File Reader.
[Computer software].
https://github.com/PNNL-Comp-Mass-Spec/Thermo-Raw-File-Reader.
https://doi.org/10.11578/dc.20180319.71.
Gibbons, Bryson, and Monroe, Matthew.
"Thermo Raw File Reader." Computer software.
February 21, 2018.
https://github.com/PNNL-Comp-Mass-Spec/Thermo-Raw-File-Reader.
https://doi.org/10.11578/dc.20180319.71.
@misc{
doecode_8636,
title = {Thermo Raw File Reader},
author = {Gibbons, Bryson and Monroe, Matthew},
abstractNote = {The Thermo Raw File Reader is a .NET DLL wrapper for Thermo's MS File Reader, which is accessible by creating an account at https://thermo.flexnetoperations.com/control/thmo/login then logging in and choosing "Utility Software". The Thermo Raw File Reader DLL provides several methods for parsing the information returned by MSFileReader, including: Determining the parent ion m/z and fragmentation mode in a given scan filter, determining the Ionization mode from a given scan filter, extracting MRM masses listed in a given scan filter, reporting the number of spectra in the .Raw file, returning details on a specific spectrum, and Obtaining the raw m/z and intensity values for a given spectrum.},
doi = {10.11578/dc.20180319.71},
url = {https://doi.org/10.11578/dc.20180319.71},
howpublished = {[Computer Software] \url{https://doi.org/10.11578/dc.20180319.71}},
year = {2018},
month = {feb}
}