Abstract
The PepAligner program can read a file containing peptides and align them to a file of protein sequences (.Fasta or delimited text) using Smith-Waterman alignment.
- Developers:
-
Monroe, Matthew [1]
- Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
- Release Date:
- 2018-02-21
- Project Type:
- Open Source, Publicly Available Repository
- Software Type:
- Scientific
- Licenses:
-
Apache License 2.0
- Sponsoring Org.:
-
USDOEPrimary Award/Contract Number:AC05-76RL01830
- Code ID:
- 8609
- Research Org.:
- Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
- Country of Origin:
- United States
Citation Formats
Monroe, Matthew.
PepAligner.
Computer Software.
https://github.com/PNNL-Comp-Mass-Spec/PepAligner.
USDOE.
21 Feb. 2018.
Web.
doi:10.11578/dc.20180319.61.
Monroe, Matthew.
(2018, February 21).
PepAligner.
[Computer software].
https://github.com/PNNL-Comp-Mass-Spec/PepAligner.
https://doi.org/10.11578/dc.20180319.61.
Monroe, Matthew.
"PepAligner." Computer software.
February 21, 2018.
https://github.com/PNNL-Comp-Mass-Spec/PepAligner.
https://doi.org/10.11578/dc.20180319.61.
@misc{
doecode_8609,
title = {PepAligner},
author = {Monroe, Matthew},
abstractNote = {The PepAligner program can read a file containing peptides and align them to a file of protein sequences (.Fasta or delimited text) using Smith-Waterman alignment.},
doi = {10.11578/dc.20180319.61},
url = {https://doi.org/10.11578/dc.20180319.61},
howpublished = {[Computer Software] \url{https://doi.org/10.11578/dc.20180319.61}},
year = {2018},
month = {feb}
}