Abstract
CROPSR is a python tool designed for genome-wide gRNA design and evaluation for CRISPR experiments, with special focus on complex genomes such as those found in energy-producing crops. CROPSR is a product of the DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI).
- Developers:
-
Müller Paul, Hans ; Istanto, Dave ; Heldenbrand, Jacob ; Hudson, Matthew [1][2]
- Center for Advanced Bioenergy and Bioproducts Innovation (CABBI), Urbana, IL (United States)
- Univ. of Illinois at Urbana-Champaign, IL (United States)
- Release Date:
- 2021-11-13
- Project Type:
- Open Source, Publicly Available Repository
- Software Type:
- Scientific
- Licenses:
-
Apache License 2.0
- Sponsoring Org.:
-
USDOE Office of Science (SC), Biological and Environmental Research (BER)Primary Award/Contract Number:SC0018420
- Code ID:
- 143939
- Research Org.:
- Center for Advanced Bioenergy and Bioproducts Innovation
- Country of Origin:
- United States
Citation Formats
Müller Paul, Hans, Istanto, Dave D., Heldenbrand, Jacob, and Hudson, Matthew E.
CROPSR: An Automated Platform for Complex Genome-Wide CRISPR gRNA Design and Validation.
Computer Software.
https://github.com/H2muller/CROPSR.
USDOE Office of Science (SC), Biological and Environmental Research (BER).
13 Nov. 2021.
Web.
doi:10.11578/dc.20250912.16.
Müller Paul, Hans, Istanto, Dave D., Heldenbrand, Jacob, & Hudson, Matthew E.
(2021, November 13).
CROPSR: An Automated Platform for Complex Genome-Wide CRISPR gRNA Design and Validation.
[Computer software].
https://github.com/H2muller/CROPSR.
https://doi.org/10.11578/dc.20250912.16.
Müller Paul, Hans, Istanto, Dave D., Heldenbrand, Jacob, and Hudson, Matthew E.
"CROPSR: An Automated Platform for Complex Genome-Wide CRISPR gRNA Design and Validation." Computer software.
November 13, 2021.
https://github.com/H2muller/CROPSR.
https://doi.org/10.11578/dc.20250912.16.
@misc{
doecode_143939,
title = {CROPSR: An Automated Platform for Complex Genome-Wide CRISPR gRNA Design and Validation},
author = {Müller Paul, Hans and Istanto, Dave D. and Heldenbrand, Jacob and Hudson, Matthew E.},
abstractNote = {CROPSR is a python tool designed for genome-wide gRNA design and evaluation for CRISPR experiments, with special focus on complex genomes such as those found in energy-producing crops. CROPSR is a product of the DOE Center for Advanced Bioenergy and Bioproducts Innovation (CABBI).},
doi = {10.11578/dc.20250912.16},
url = {https://doi.org/10.11578/dc.20250912.16},
howpublished = {[Computer Software] \url{https://doi.org/10.11578/dc.20250912.16}},
year = {2021},
month = {nov}
}