Abstract
An R package built to match proteoform isotoping distributions to mass spectrum, quantitatively select
matches of high quality, and visualize those matches in a trelliscope display.
- Developers:
-
Degnan, David [1] ; Bramer, Lisa [1] ; Zhou, Mowei [1] ; Fulcher, James [1] ; Zemaitis, Kevin [1] ; Pasa Tolic, Ljiljana [1]
- Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
- Release Date:
- 2024-08-05
- Project Type:
- Open Source, Publicly Available Repository
- Software Type:
- Scientific
- Licenses:
-
BSD 2-clause "Simplified" License
- Sponsoring Org.:
-
USDOEPrimary Award/Contract Number:AC05-76RL01830
- Code ID:
- 139090
- Site Accession Number:
- Battelle IPID 32524-E
- Research Org.:
- Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
- Country of Origin:
- United States
Citation Formats
Degnan, David, Bramer, Lisa, Zhou, Mowei, Fulcher, James, Zemaitis, Kevin, and Pasa Tolic, Ljiljana.
IsoMatchMS.
Computer Software.
https://github.com/PNNL-HubMAP-Proteoform-Suite/IsoMatchMS.
USDOE.
05 Aug. 2024.
Web.
doi:10.11578/dc.20240805.1.
Degnan, David, Bramer, Lisa, Zhou, Mowei, Fulcher, James, Zemaitis, Kevin, & Pasa Tolic, Ljiljana.
(2024, August 05).
IsoMatchMS.
[Computer software].
https://github.com/PNNL-HubMAP-Proteoform-Suite/IsoMatchMS.
https://doi.org/10.11578/dc.20240805.1.
Degnan, David, Bramer, Lisa, Zhou, Mowei, Fulcher, James, Zemaitis, Kevin, and Pasa Tolic, Ljiljana.
"IsoMatchMS." Computer software.
August 05, 2024.
https://github.com/PNNL-HubMAP-Proteoform-Suite/IsoMatchMS.
https://doi.org/10.11578/dc.20240805.1.
@misc{
doecode_139090,
title = {IsoMatchMS},
author = {Degnan, David and Bramer, Lisa and Zhou, Mowei and Fulcher, James and Zemaitis, Kevin and Pasa Tolic, Ljiljana},
abstractNote = {An R package built to match proteoform isotoping distributions to mass spectrum, quantitatively select
matches of high quality, and visualize those matches in a trelliscope display.},
doi = {10.11578/dc.20240805.1},
url = {https://doi.org/10.11578/dc.20240805.1},
howpublished = {[Computer Software] \url{https://doi.org/10.11578/dc.20240805.1}},
year = {2024},
month = {aug}
}