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Title: Make the Most Out of Genome Announcements with KBase

Abstract

Genomics is a dynamic field driven by new technology, massive growth in data, and changes in how scientists share knowledge. This brings new challenges for researchers looking to maximize the impact of their science and ensure the longevity of their data. These changes are especially relevant for the practice of publishing genome announcements. Genome announcements are meant to share and promote newly sequenced organisms with the larger scientific community. A few decades ago, genome announcements were highly anticipated hallmarks of novel science. But, what was once a publishing coup is now an every day event. It is harder and harder to keep abreast of all the genomes that have been sequenced and promote your own new genomes to get the attention and recognition of your research community. Fortunately, KBase can help construct genomes from your sequencing data, generate reports for your announcement, and promote your data to your research community.

Authors:
ORCiD logo ; ORCiD logo ; ORCiD logo
  1. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
  2. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Publication Date:
DOE Contract Number:  
DE-AC02-05CH11231
Product Type:
Dataset
Research Org.:
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); DOE Systems Biology Knowledgebase (KBase)
Sponsoring Org.:
USDOE Office of Science (SC), Biological and Environmental Research (BER)
Subject:
96 KNOWLEDGE MANAGEMENT AND PRESERVATION; 59 BASIC BIOLOGICAL SCIENCES
Keywords:
genome; genomics; data science; assembly; annotation; comparative genomics; publication
OSTI Identifier:
1608940
DOI:
10.25982/1608940

Citation Formats

Allen, Benjamin H, Land, Miriam L, and Wood-Charlson, Elisha M. Make the Most Out of Genome Announcements with KBase. United States: N. p., 2020. Web. doi:10.25982/1608940.
Allen, Benjamin H, Land, Miriam L, & Wood-Charlson, Elisha M. Make the Most Out of Genome Announcements with KBase. United States. doi:10.25982/1608940.
Allen, Benjamin H, Land, Miriam L, and Wood-Charlson, Elisha M. 2020. "Make the Most Out of Genome Announcements with KBase". United States. doi:10.25982/1608940. https://www.osti.gov/servlets/purl/1608940. Pub date:Mon Apr 06 00:00:00 EDT 2020
@article{osti_1608940,
title = {Make the Most Out of Genome Announcements with KBase},
author = {Allen, Benjamin H and Land, Miriam L and Wood-Charlson, Elisha M},
abstractNote = {Genomics is a dynamic field driven by new technology, massive growth in data, and changes in how scientists share knowledge. This brings new challenges for researchers looking to maximize the impact of their science and ensure the longevity of their data. These changes are especially relevant for the practice of publishing genome announcements. Genome announcements are meant to share and promote newly sequenced organisms with the larger scientific community. A few decades ago, genome announcements were highly anticipated hallmarks of novel science. But, what was once a publishing coup is now an every day event. It is harder and harder to keep abreast of all the genomes that have been sequenced and promote your own new genomes to get the attention and recognition of your research community. Fortunately, KBase can help construct genomes from your sequencing data, generate reports for your announcement, and promote your data to your research community.},
doi = {10.25982/1608940},
journal = {},
number = ,
volume = ,
place = {United States},
year = {2020},
month = {4}
}

Dataset:

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Works referenced in this record:

Using KBase to Assemble and Annotate Prokaryotic Genomes
journal, August 2017

  • Allen, Benjamin; Drake, Meghan; Harris, Nomi
  • Current Protocols in Microbiology, Vol. 46, Issue 1
  • DOI: 10.1002/cpmc.37