EGVII endoglucanase and nucleic acids encoding the same

Dunn-Coleman, Nigel; Goedegebuur, Frits; Ward, Michael; Yao, Jian

EGVII endoglucanase and nucleic acids encoding the same

Patent · 05 May 2009

OSTI ID:988158

Dunn-Coleman, Nigel ^[1]; Goedegebuur, Frits ^[2]; Ward, Michael ^[3]; Yao, Jian ^[4]

Los Gatos, CA
Vlaardingen, NL
San Francisco, CA
Sunnyvale, CA

The present invention provides an endoglucanase nucleic acid sequence, designated egl7, and the corresponding EGVII amino acid sequence. The invention also provides expression vectors and host cells comprising a nucleic acid sequence encoding EGVII, recombinant EGVII proteins and methods for producing the same.

View Patent

Research Organization:: Midwest Research Institute

Sponsoring Organization:: USDOE

DOE Contract Number:: AC36-99GO10337;

Assignee:: Danisco US Inc., Genencor Division (Palo Alto, CA)

Patent Number(s):: 7,527,959

Application Number:: 11/330,085

OSTI ID:: 988158

Country of Publication:: United States

Language:: English

References (71)

Crystal structure of a bacterial family-III cellulose-binding domain: a general mechanism for attachment to cellulose. Tormo, J.; Lamed, R.; Chirino, A. J. The EMBO Journal, Vol. 15, Issue 21, p. 5739-5751 https://doi.org/10.1002/j.1460-2075.1996.tb00960.x	journal	November 1996
Expression of two Trichoderma reesei endoglucanases in the yeast Saccharomyces cerevisiae Panttilä, Merja E.; André, Lars; Saloheimo, Markku Yeast, Vol. 3, Issue 3, p. 175-185 https://doi.org/10.1002/yea.320030305	journal	September 1987
Viruses and gene silencing in plants Baulcombe, D.; Calisher, Charles H.; Horzinek, M. C. 100 Years of Virology, p. 189-201 https://doi.org/10.1007/978-3-7091-6425-9_14	book	January 1999
Cloning and sequencing of cellulase cDNA from Aspergillus kawachii and its expression in Saccharomyces cerevisiae Sakamoto, S.; Tamura, G.; Ito, K. Current Genetics, Vol. 27, Issue 5, p. 435-439 https://doi.org/10.1007/BF00311212	journal	April 1995
Characterization of cellulases by HPLC separation Fliess, A.; Schügerl, K. European Journal of Applied Microbiology and Biotechnology, Vol. 17, Issue 5, p. 314-318 https://doi.org/10.1007/BF00508028	journal	January 1983
Purification and properties of an extracellular β-glucosidase from Lenzites trabea Herr, D.; Baumer, F.; Dellweg, H. European Journal of Applied Microbiology and Biotechnology, Vol. 5, Issue 1, p. 29-36 https://doi.org/10.1007/BF00515684	journal	January 1978
Cloning, sequencing and overexpression of a Rhodothermus marinus gene encoding a thermostable cellulase of glycosyl hydrolase family 12 Halldórsdóttir, S.; Thórólfsdót, E. T.; Spilliaert, R. Applied Microbiology and Biotechnology, Vol. 49, Issue 3, p. 277-284 https://doi.org/10.1007/s002530051169	journal	March 1998
Secretion of Trichoderma reesei β-glucosidase by Saccharomyces cerevisiae Cummings, C.; Fowler, T. Current Genetics, Vol. 29, Issue 3 https://doi.org/10.1007/s002940050040	journal	February 1996
Separation of endo- and exo-type cellulases using a new affinity chromatography method van Tilbeurgh, Herman; Bhikhabhai, Ramagauri; Göran Pettersson, L. FEBS Letters, Vol. 169, Issue 2, p. 215-218 https://doi.org/10.1016/0014-5793(84)80321-X	journal	April 1984
Methods for measuring cellulase activities Wood, Thomas M.; Bhat, K. Mahalingeshwara Methods in Enzymology, Vol. 160, p. 87-112 https://doi.org/10.1016/0076-6879(88)60109-1	journal	January 1988
Cellulases of Trichoderma reesei Schülein, Martin Methods in Enzymology, Vol. 160, p. 234-242 https://doi.org/10.1016/0076-6879(88)60125-X	journal	January 1988
[57] Rethinking your purification procedure Deutscher, Murray P. Guide to Protein Purification https://doi.org/10.1016/0076-6879(90)82059-B	book	January 1990
Organization of a gene cluster expressed specifically in the asexual spores of A. nidulans Timberlake, William E.; Barnard, Elizabeth C. Cell, Vol. 26, Issue 1, p. 29-37 https://doi.org/10.1016/0092-8674(81)90030-1	journal	October 1981
Purification and characterization of two extracellular β-glucosidases from Trichoderma reesei Chen, Huizhong; Hayn, Marianne; Esterbauer, Hermann Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology, Vol. 1121, Issue 1-2, p. 54-60 https://doi.org/10.1016/0167-4838(92)90336-C	journal	May 1992
Cellulase families and their genes Knowles, Jonathan; Lehtovaara, Päivi; Teeri, Tuula Trends in Biotechnology, Vol. 5, Issue 9, p. 255-261 https://doi.org/10.1016/0167-7799(87)90102-8	journal	September 1987
Cassette mutagenesis: an efficient method for generation of multiple mutations at defined sites Wells, James A.; Vasser, Mark; Powers, David B. Gene, Vol. 34, Issue 2-3, p. 315-323 https://doi.org/10.1016/0378-1119(85)90140-4	journal	January 1985
Homology between cellulase genes of Trichoderma reesei: complete nucleotide sequence of the endoglucanase I gene Penttilä, Merja; Lehtovaara, Päivi; Nevalainen, Helena Gene, Vol. 45, Issue 3, p. 253-263 https://doi.org/10.1016/0378-1119(86)90023-5	journal	January 1986
Synthesis and secretion of wheat α-amylase in Saccharomyces cerevisiae Rothstein, Steven J.; Lahners, Kristine N.; Lazarus, Colin M. Gene, Vol. 55, Issue 2-3, p. 353-356 https://doi.org/10.1016/0378-1119(87)90296-4	journal	January 1987
Homologous domains in Trichoderma reesei cellulolytic enzymes: Gene sequence and expression of cellobiohydrolase II Teeri, Tuula T.; Lehtovaara, Päivi; Kauppinen, Sakari Gene, Vol. 51, Issue 1, p. 43-52 https://doi.org/10.1016/0378-1119(87)90472-0	journal	January 1987
EGIII, a new endoglucanase from Trichoderma reesei: the characterization of both gene and enzyme Saloheimo, M.; Lehtovaara, P.; Penttilä, M. Gene, Vol. 63, Issue 1, p. 11-21 https://doi.org/10.1016/0378-1119(88)90541-0	journal	March 1988
Efficient secretion of two fungal cellobiohydrolases by Saccharomyces cerevisiae Penttilä, Merja E.; André, Lars; Lehtovaara, Päivi Gene, Vol. 63, Issue 1, p. 103-112 https://doi.org/10.1016/0378-1119(88)90549-5	journal	March 1988
CelS: a novel endoglucanase identified from Erwinia carotovora subsp. carotovora Saarilahti, Hannu T.; Henrissat, Bernard; Tapio Palva, E. Gene, Vol. 90, Issue 1, p. 9-14 https://doi.org/10.1016/0378-1119(90)90433-R	journal	May 1990
Cloning and sequencing of the cDNA encoding β-glucosidase 1 from Aspergillus aculeatus Kawaguchi, Takashi; Enoki, Tatsuji; Tsurumaki, Shinji Gene, Vol. 173, Issue 2, p. 287-288 https://doi.org/10.1016/0378-1119(96)00179-5	journal	September 1996
A radiation hybrid map of 18 growth factor, growth factor receptor, hormone receptor, or neurotransmitter receptor genes on the distal region of the long arm of chromosome 5 Warrington, J. A.; Bailey, S. K.; Armstrong, E. Genomics, Vol. 13, Issue 3, p. 803-808 https://doi.org/10.1016/0888-7543(92)90156-M	journal	July 1992
Production of fully human antibodies by transgenic mice Jakobovits, Aya Current Opinion in Biotechnology, Vol. 6, Issue 5, p. 561-566 https://doi.org/10.1016/0958-1669(95)80093-X	journal	January 1995
Characteristics of fungal cellulases Goyal, Anil; Ghosh, Bijan; Eveleigh, Douglas Bioresource Technology, Vol. 36, Issue 1, p. 37-50 https://doi.org/10.1016/0960-8524(91)90098-5	journal	January 1991
Genetically engineered peptide fusions for improved protein partitioning in aqueous two-phase systems Collén, Anna; Ward, Michael; Tjerneld, Folke Journal of Chromatography A, Vol. 910, Issue 2, p. 275-284 https://doi.org/10.1016/S0021-9673(00)01212-7	journal	March 2001
Analytical separation of Trichoderma reesei cellulases by ion-exchange fast protein liquid chromatography Ellouz, S.; Durand, H.; Tiraby, G. Journal of Chromatography A, Vol. 396, p. 307-317 https://doi.org/10.1016/S0021-9673(01)94068-3	journal	January 1987
Ion-exchange chromatographic purification and quantitative analysis of Trichoderma reesei cellulases cellobiohydrolase I, II and endoglucanase II by fast protein liquid chromatography Medve, József; Lee, Dora; Tjerneld, Folke Journal of Chromatography A, Vol. 808, Issue 1-2, p. 153-165 https://doi.org/10.1016/S0021-9673(98)00132-0	journal	May 1998
Studies on the chromatographic fractionation of Trichoderma reesei cellulases by hydrophobic interaction Tomaz, Cândida T.; Queiroz, João A. Journal of Chromatography A, Vol. 865, Issue 1-2, p. 123-128 https://doi.org/10.1016/S0021-9673(99)00851-1	journal	December 1999
Basic local alignment search tool Altschul, Stephen F.; Gish, Warren; Miller, Webb Journal of Molecular Biology, Vol. 215, Issue 3, p. 403-410 https://doi.org/10.1016/S0022-2836(05)80360-2	journal	October 1990
[79] Purification of all glycolytic enzymes from one muscle extract Scopes, Robert K.; Stoter, Ann Methods in Enzymology, Vol. 90, p. 479-490 https://doi.org/10.1016/S0076-6879(82)90175-6	journal	January 1982
The roles and function of cellulose-binding domains Linder, Markus; Teeri, Tuula T. Journal of Biotechnology, Vol. 57, Issue 1-3, p. 15-28 https://doi.org/10.1016/S0168-1656(97)00087-4	journal	September 1997
Directed immobilization of recombinant staphylococci on cotton fibers by functional display of a fungal cellulose-binding domain Lehtiö, J. FEMS Microbiology Letters, Vol. 195, Issue 2 https://doi.org/10.1016/S0378-1097(00)00562-0	journal	February 2001
Simultaneous saccharification and fermentation of lignocellulosic wastes to ethanol using a thermotolerant yeast Hari Krishna, S.; Janardhan Reddy, T.; Chowdary, G. V. Bioresource Technology, Vol. 77, Issue 2, p. 193-196 https://doi.org/10.1016/S0960-8524(00)00151-6	journal	April 2001
Kinetics of cellulose saccharification by Trichoderma reesei cellulases Ortega, N. International Biodeterioration & Biodegradation, Vol. 47, Issue 1, p. 7-14 https://doi.org/10.1016/S0964-8305(00)00101-3	journal	January 2001
Prediction of protein function from protein sequence and structure Whisstock, James C.; Lesk, Arthur M. Quarterly Reviews of Biophysics, Vol. 36, Issue 3, p. 307-340 https://doi.org/10.1017/S0033583503003901	journal	January 1999
Conversion of a β-Ketoacyl Synthase to a Malonyl Decarboxylase by Replacement of the Active-Site Cysteine with Glutamine Witkowski, Andrzej; Joshi, Anil K.; Lindqvist, Ylva Biochemistry, Vol. 38, Issue 36, p. 11643-11650 https://doi.org/10.1021/bi990993h	journal	September 1999
Fractionation of cellulase and β-glucosidase in a Trichoderma reesei culture liquid by use of two-phase partitioning Brumbauer, Anikó; Johansson, Göte; Réczey, Kati Bioseparation, Vol. 7, Issue 6, p. 287-295 https://doi.org/10.1023/A:1008153418019	journal	November 1999
Trichoderma reesei cellulases and their core domains in the hydrolysis and modification of chemical pulp Suurnäkki, A.; Tenkanen, M.; Siika-aho, M. Cellulose, Vol. 7, Issue 2, p. 189-209 https://doi.org/10.1023/A:1009280109519	journal	June 2000
Continuous cultures of fused cells secreting antibody of predefined specificity Köhler, G.; Milstein, C. Nature, Vol. 256, Issue 5517, p. 495-497 https://doi.org/10.1038/256495a0	journal	August 1975
Replacing the complementarity-determining regions in a human antibody with those from a mouse Jones, Peter T.; Dear, Paul H.; Foote, Jefferson Nature, Vol. 321, Issue 6069, p. 522-525 https://doi.org/10.1038/321522a0	journal	May 1986
Reshaping human antibodies for therapy Riechmann, Lutz; Clark, Michael; Waldmann, Herman Nature, Vol. 332, Issue 6162, p. 323-327 https://doi.org/10.1038/332323a0	journal	March 1988
A novel genetic system to detect protein–protein interactions Fields, Stanley; Song, Ok-kyu Nature, Vol. 340, Issue 6230, p. 245-246 https://doi.org/10.1038/340245a0	journal	July 1989
A New Model For Enzymatic Hydrolysis of Cellulose Based on the Two-Domain Structure of Cellobiohydrolase I Ståhlberg, Jerry; Johansson, Gunnar; Pettersson, Göran Nature Biotechnology, Vol. 9, Issue 3, p. 286-290 https://doi.org/10.1038/nbt0391-286	journal	March 1991
Molecular Cloning of Exo–Cellobiohydrolase I Derived from Trichoderma Reesei Strain L27 Shoemaker, S.; Schweickart, V.; Ladner, M. Nature Biotechnology, Vol. 1, Issue 8, p. 691-696 https://doi.org/10.1038/nbt1083-691	journal	October 1983
New families in the classification of glycosyl hydrolases based on amino acid sequence similarities Henrissat, B.; Bairoch, A. Biochemical Journal, Vol. 293, Issue 3, p. 781-788 https://doi.org/10.1042/bj2930781	journal	August 1993
Properties of cellulolytic enzyme systems Wood, Thomas M. Biochemical Society Transactions, Vol. 13, Issue 2, p. 407-410 https://doi.org/10.1042/bst0130407	journal	April 1985
ACEII, a Novel Transcriptional Activator Involved in Regulation of Cellulase and Xylanase Genes of Trichoderma reesei Aro, Nina; Saloheimo, Anu; Ilmén, Marja Journal of Biological Chemistry, Vol. 276, Issue 26, p. 24309-24314 https://doi.org/10.1074/jbc.M003624200	journal	April 2001
Structure of Cellulases and Their Applications Ohmiya, Kunio; Sakka, Kazuo; Karita, Shuichi Biotechnology and Genetic Engineering Reviews, Vol. 14, Issue 1, p. 365-414 https://doi.org/10.1080/02648725.1997.10647949	journal	April 1997
Oligonucleotide-directed mutagenesis using M13-derived vectors: an efficient and general procedure for the production of point mutations in any fragment of DNA Zoller, Mark J.; Smith, Michael Nucleic Acids Research, Vol. 10, Issue 20, p. 6487-6500 https://doi.org/10.1093/nar/10.20.6487	journal	January 1982
Improved oligonudeotide site-directed rautagenesis using M13 vectors Carter, Paul; Bedouelle, Hugues; Winter, Greg Nucleic Acids Research, Vol. 13, Issue 12, p. 4431-4443 https://doi.org/10.1093/nar/13.12.4431	journal	January 1985
Complete nucleotide sequence of a gene coding for Aspergillus aculeatus cellulase (FI-CMCase) Ooi, Toshihiko; Shinmyo, Atsuhiko; Okada, Hirosuke Nucleic Acids Research, Vol. 18, Issue 19 https://doi.org/10.1093/nar/18.19.5884	journal	January 1990
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Altschul, Stephen F.; Madden, Thomas L.; Schäffer, Alejandro A. Nucleic Acids Research, Vol. 25, Issue 17, p. 3389-3402 https://doi.org/10.1093/nar/25.17.3389	journal	September 1997
Molecular Cloning and Expression of the Novel Fungal β-Glucosidase Genes from Humicola grisea and Trichoderma reesei Takashima, S.; Nakamura, A.; Hidaka, M. Journal of Biochemistry, Vol. 125, Issue 4, p. 728-736 https://doi.org/10.1093/oxfordjournals.jbchem.a022343	journal	April 1999
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites Nielsen, H.; Engelbrecht, J.; Brunak, S. Protein Engineering Design and Selection, Vol. 10, Issue 1, p. 1-6 https://doi.org/10.1093/protein/10.1.1	journal	January 1997
Importance of Hydrogen-Bond Formation in Stabilizing the Transition State of Subtilisin Wells, J. A.; Cunningham, B. C.; Graycar, T. P. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 317, Issue 1540, p. 415-423 https://doi.org/10.1098/rsta.1986.0051	journal	April 1986
A novel, small endoglucanase gene, egl5, from Trichoderma reesei isolated by expression in yeast Saloheimo, Anu; Henrissat, Bernard; Hoffrén, Anna-Marja Molecular Microbiology, Vol. 13, Issue 2, p. 219-228 https://doi.org/10.1111/j.1365-2958.1994.tb00417.x	journal	July 1994
Studies of the cellulolytic system of Trichoderma reesei QM 9414. Analysis of domain function in two cellobiohydrolases by limited proteolysis TOMME, Peter; TILBEURGH, Herman; PETTERSSON, Goran European Journal of Biochemistry, Vol. 170, Issue 3, p. 575-581 https://doi.org/10.1111/j.1432-1033.1988.tb13736.x	journal	January 1988
Cloning and Sequencing of a Rhodothermus marinus Gene, bglA, Coding for a Thermostable beta-Glucanase and its Expression in Escherichia coli Spilliaert, Remi; Hreggvidsson, Gudmundur Oli; Kristjansson, Jakob Kristjan European Journal of Biochemistry, Vol. 224, Issue 3, p. 923-930 https://doi.org/10.1111/j.1432-1033.1994.00923.x	journal	September 1994
cDNA Cloning of a Trichoderma reesei Cellulase and Demonstration of Endoglucanase Activity by Expression in Yeast Saloheimo, Markku; Nakari-SetaLa, Tiina; Tenkanen, Maija European Journal of Biochemistry, Vol. 249, Issue 2, p. 584-591 https://doi.org/10.1111/j.1432-1033.1997.00584.x	journal	October 1997
Codon optimization of xylanase gene xynB from the thermophilic bacterium Dictyoglomus thermophilum for expression in the filamentous fungus Trichoderma reesei Te'o, Valentino S.J.; Cziferszky, Angela E.; Bergquist, Peter L. FEMS Microbiology Letters, Vol. 190, Issue 1, p. 13-19 https://doi.org/10.1111/j.1574-6968.2000.tb09255.x	journal	September 2000
Production of Antigen-Specific Human Antibodies from Mice Engineered with Human Heavy and Light Chain YACs Jakobovits, Aya; Green, Larry L.; Hardy, Margaret C. Annals of the New York Academy of Sciences, Vol. 764, Issue 1, p. 525-535 https://doi.org/10.1111/j.1749-6632.1995.tb55878.x	journal	September 1995
A beta 3 integrin mutation abolishes ligand binding and alters divalent cation-dependent conformation Loftus, J.; O'Toole, T.; Plow, E. Science, Vol. 249, Issue 4971, p. 915-918 https://doi.org/10.1126/science.2392682	journal	August 1990
Reshaping human antibodies: grafting an antilysozyme activity Verhoeyen, M.; Milstein, C.; Winter, G. Science, Vol. 239, Issue 4847, p. 1534-1536 https://doi.org/10.1126/science.2451287	journal	March 1988
Expression of Aureobasidium pullulans xynA in, and secretion of the xylanase from, Saccharomyces cerevisiae. Li, X. L.; Ljungdahl, L. G. Applied and environmental microbiology, Vol. 62, Issue 1 https://doi.org/10.1128/AEM.62.1.209-213.1996	journal	January 1996
Regulation of cellulase gene expression in the filamentous fungus Trichoderma reesei. Ilmén, M.; Saloheimo, A.; Onnela, M. L. Applied and environmental microbiology, Vol. 63, Issue 4 https://doi.org/10.1128/AEM.63.4.1298-1306.1997	journal	January 1997
Molecular Characterization and Heterologous Expression of the Gene Encoding a Low-Molecular-Mass Endoglucanase from Trichoderma reesei QM9414 Okada, Hirofumi; Tada, Kohji; Sekiya, Tadashi Applied and Environmental Microbiology, Vol. 64, Issue 2 https://doi.org/10.1128/AEM.64.2.555-563.1998	journal	January 1998
Melamine Deaminase and Atrazine Chlorohydrolase: 98 Percent Identical but Functionally Different Seffernick, J. L.; de Souza, M. L.; Sadowsky, M. J. Journal of Bacteriology, Vol. 183, Issue 8, p. 2405-2410 https://doi.org/10.1128/JB.183.8.2405-2410.2001	journal	April 2001
Antibodies specific for the human retinoblastoma protein identify a family of related polypeptides. Hu, Q. J.; Bautista, C.; Edwards, G. M. Molecular and Cellular Biology, Vol. 11, Issue 11, p. 5792-5799 https://doi.org/10.1128/MCB.11.11.5792	journal	November 1991
Purification and characterization of a β-glucosidase from solid-state cultures of Humicola grisea var. thermoidea Filho, Edivaldo Ximenes Ferreira Canadian Journal of Microbiology, Vol. 42, Issue 1, p. 1-5 https://doi.org/10.1139/m96-001	journal	January 1996

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