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Title: Structural Basis for Polyproline Recognition by the FE65 WW Domain

Abstract

The neuronal protein FE65 functions in brain development and amyloid precursor protein (APP) signaling through its interaction with the mammalian enabled (Mena) protein and APP, respectively. The recognition of short polyproline sequences in Mena by the FE65 WW domain has a central role in axon guidance and neuronal positioning in the developing brain. We have determined the crystal structures of the human FE65 WW domain (residues 253-289) in the apo form and bound to the peptides PPPPPPLPP and PPPPPPPPPL, which correspond to human Mena residues 313-321 and 347-356, respectively. The FE65 WW domain contains two parallel ligand-binding grooves, XP (formed by residues Y269 and W280) and XP2 (formed by Y269 and W271). Both Mena peptides adopt a polyproline helical II conformation and bind to the WW domain in a forward (N-C) orientation through selection of the PPPPP motif by the XP and XP2 grooves. This mode of ligand recognition is strikingly similar to polyproline interaction with SH3 domains. Importantly, comparison of the FE65 WW structures in the apo and liganded forms shows that the XP2 groove is formed by an induced-fit mechanism that involves movements of the W271 and Y269 side-chains upon ligand binding. These structures elucidate the molecular determinantsmore » underlying polyproline ligand selection by the FE65 WW domain and provide a framework for the design of small molecules that would interfere with FE65 WW-ligand interaction and modulate neuronal development and APP signaling.« less

Authors:
; ; ; ; ;
Publication Date:
Research Org.:
Brookhaven National Laboratory (BNL) National Synchrotron Light Source
Sponsoring Org.:
Doe - Office Of Science
OSTI Identifier:
930012
Report Number(s):
BNL-80626-2008-JA
Journal ID: ISSN 0022-2836; JMOBAK; TRN: US200822%%1163
DOE Contract Number:  
DE-AC02-98CH10886
Resource Type:
Journal Article
Resource Relation:
Journal Name: Journal of Molecular Biology; Journal Volume: 372; Journal Issue: 4
Country of Publication:
United States
Language:
English
Subject:
36 MATERIALS SCIENCE; BRAIN; CRYSTAL STRUCTURE; FUNCTIONS; HUMAN POPULATIONS; INTERACTIONS; LIGANDS; MOLECULES; NERVE CELLS; ORIENTATION; PEPTIDES; POSITIONING; PRECURSOR; PROTEINS; RESIDUES; X-RAY PHOTOELECTRON SPECTROSCOPY; national synchrotron light source

Citation Formats

Meiyappan,M., Birrane, G., Ladias, J., Yaluris, G., Roberie, T., and Amiridis, M.. Structural Basis for Polyproline Recognition by the FE65 WW Domain. United States: N. p., 2007. Web. doi:10.1016/j.jmb.2007.06.064.
Meiyappan,M., Birrane, G., Ladias, J., Yaluris, G., Roberie, T., & Amiridis, M.. Structural Basis for Polyproline Recognition by the FE65 WW Domain. United States. doi:10.1016/j.jmb.2007.06.064.
Meiyappan,M., Birrane, G., Ladias, J., Yaluris, G., Roberie, T., and Amiridis, M.. Mon . "Structural Basis for Polyproline Recognition by the FE65 WW Domain". United States. doi:10.1016/j.jmb.2007.06.064.
@article{osti_930012,
title = {Structural Basis for Polyproline Recognition by the FE65 WW Domain},
author = {Meiyappan,M. and Birrane, G. and Ladias, J. and Yaluris, G. and Roberie, T. and Amiridis, M.},
abstractNote = {The neuronal protein FE65 functions in brain development and amyloid precursor protein (APP) signaling through its interaction with the mammalian enabled (Mena) protein and APP, respectively. The recognition of short polyproline sequences in Mena by the FE65 WW domain has a central role in axon guidance and neuronal positioning in the developing brain. We have determined the crystal structures of the human FE65 WW domain (residues 253-289) in the apo form and bound to the peptides PPPPPPLPP and PPPPPPPPPL, which correspond to human Mena residues 313-321 and 347-356, respectively. The FE65 WW domain contains two parallel ligand-binding grooves, XP (formed by residues Y269 and W280) and XP2 (formed by Y269 and W271). Both Mena peptides adopt a polyproline helical II conformation and bind to the WW domain in a forward (N-C) orientation through selection of the PPPPP motif by the XP and XP2 grooves. This mode of ligand recognition is strikingly similar to polyproline interaction with SH3 domains. Importantly, comparison of the FE65 WW structures in the apo and liganded forms shows that the XP2 groove is formed by an induced-fit mechanism that involves movements of the W271 and Y269 side-chains upon ligand binding. These structures elucidate the molecular determinants underlying polyproline ligand selection by the FE65 WW domain and provide a framework for the design of small molecules that would interfere with FE65 WW-ligand interaction and modulate neuronal development and APP signaling.},
doi = {10.1016/j.jmb.2007.06.064},
journal = {Journal of Molecular Biology},
number = 4,
volume = 372,
place = {United States},
year = {Mon Jan 01 00:00:00 EST 2007},
month = {Mon Jan 01 00:00:00 EST 2007}
}