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Title: Multiple Whole Genome Alignments and Novel Biomedical Applicationsat the VISTA Portal

Abstract

The VISTA portal for comparative genomics is designed togive biomedical scientists a unified set of tools to lead them from theraw DNA sequences through the alignment and annotation to thevisualization of the results. The VISTA portal also hosts alignments of anumber of genomes computed by our group, allowing users to study regionsof their interest without having to manually download the individualsequences. Here we describe various algorithmic and functionalimprovements implemented in the VISTA portal over the last two years. TheVISTA Portal is accessible at http://genome.lbl.gov/vista.

Authors:
; ; ; ;
Publication Date:
Research Org.:
COLLABORATION - U.Toronto/Canada
OSTI Identifier:
929761
Report Number(s):
LBNL-62511
Journal ID: ISSN 0305-1048; NARHAD; R&D Project: GHPG6C; BnR: 400412000; TRN: US200812%%652
DOE Contract Number:
DE-AC02-05CH11231; NIHU1HL66681B
Resource Type:
Journal Article
Resource Relation:
Journal Name: Nucleic Acids Research; Journal Volume: 35; Related Information: Journal Publication Date: 07/2007
Country of Publication:
United States
Language:
English
Subject:
60; ALIGNMENT; DNA; FUNCTIONALS; VISTA comparative genomics DNA sequence

Citation Formats

Brudno, Michael, Poliakov, Alexander, Minovitsky, Simon, Ratnere,Igor, and Dubchak, Inna. Multiple Whole Genome Alignments and Novel Biomedical Applicationsat the VISTA Portal. United States: N. p., 2007. Web. doi:10.1093/nar/gkm279.
Brudno, Michael, Poliakov, Alexander, Minovitsky, Simon, Ratnere,Igor, & Dubchak, Inna. Multiple Whole Genome Alignments and Novel Biomedical Applicationsat the VISTA Portal. United States. doi:10.1093/nar/gkm279.
Brudno, Michael, Poliakov, Alexander, Minovitsky, Simon, Ratnere,Igor, and Dubchak, Inna. Thu . "Multiple Whole Genome Alignments and Novel Biomedical Applicationsat the VISTA Portal". United States. doi:10.1093/nar/gkm279. https://www.osti.gov/servlets/purl/929761.
@article{osti_929761,
title = {Multiple Whole Genome Alignments and Novel Biomedical Applicationsat the VISTA Portal},
author = {Brudno, Michael and Poliakov, Alexander and Minovitsky, Simon and Ratnere,Igor and Dubchak, Inna},
abstractNote = {The VISTA portal for comparative genomics is designed togive biomedical scientists a unified set of tools to lead them from theraw DNA sequences through the alignment and annotation to thevisualization of the results. The VISTA portal also hosts alignments of anumber of genomes computed by our group, allowing users to study regionsof their interest without having to manually download the individualsequences. Here we describe various algorithmic and functionalimprovements implemented in the VISTA portal over the last two years. TheVISTA Portal is accessible at http://genome.lbl.gov/vista.},
doi = {10.1093/nar/gkm279},
journal = {Nucleic Acids Research},
number = ,
volume = 35,
place = {United States},
year = {Thu Feb 01 00:00:00 EST 2007},
month = {Thu Feb 01 00:00:00 EST 2007}
}