Information Management Infrastructure for the Systematic Annotation of Vertebrate Genomes
The primary accomplishment of the project has been the development of a functional genomics database system, GUS (Genomics Unified Schema). The system provides a relational schema, application framework, and web interface for multiple projects and includes information on sequences, gene expression, gene regulation, ontologies, and data provenance. The system has been made portable and has been set up at other institutions. A web site is available describing the system and providing links for downloading code at http://www.gusdb.org.
- Research Organization:
- University of Pennsylvania, Philadelphia, PA
- Sponsoring Organization:
- USDOE - Office of Energy Research (ER)
- DOE Contract Number:
- FG02-00ER62893
- OSTI ID:
- 899900
- Country of Publication:
- United States
- Language:
- English
Similar Records
Next Generation Models for Storage and Representation of Microbial Biological Annotation
Next generation models for storage and representation of microbial biological annotation
Status of genome function annotation in model organisms and crops
Conference
·
Fri Jan 01 00:00:00 EST 2010
·
OSTI ID:899900
+1 more
Next generation models for storage and representation of microbial biological annotation
Journal Article
·
Fri Oct 01 00:00:00 EDT 2010
· BMC Bioinformatics
·
OSTI ID:899900
+1 more
Status of genome function annotation in model organisms and crops
Journal Article
·
Thu Jul 06 00:00:00 EDT 2023
· Plant Direct
·
OSTI ID:899900