Knowledge discovery of multilevel protein motifs

Technical Report · Sat Dec 31 00:00:00 EST 1994

OSTI ID:377132

Conklin, D; Glasgow, J; Fortier, S ^[1]

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1. Queen`s Univ., Kingston, Ontario (Canada)

A new category of protein motif is introduced. This type of motif captures, in addition to global structure, the nested structure of its component parts. A dataset of four proteins is represented using this scheme. A structured machine discovery procedure is used to discover recurrent amino acid motifs and this knowledge is utilized for the expression of subsequent protein motif discoveries. Examples of discovered multilevel motifs are presented.

• Research Organization: Stanford Univ., CA (United States)
• OSTI ID: 377132
• Report Number(s): CONF-9408117-; TRN: 96:005197-0012
• Resource Relation: Conference: 2. international conference on intelligent systems for molecular biology, Stanford, CA (United States), 15-17 Aug 1994; Other Information: PBD: [1994]; Related Information: Is Part Of Proceedings: Second international conference on intelligent systems for molecular biology; Altman, R.; Brutlag, D.; Karp, P.; Lathrop, R.; Searls, D. [eds.]; PB: 389 p.
• Country of Publication: United States
• Language: English

Related Subjects

55 BIOLOGY AND MEDICINE
BASIC STUDIES
99 MATHEMATICS
COMPUTERS
INFORMATION SCIENCE
MANAGEMENT
LAW
MISCELLANEOUS
PROTEIN STRUCTURE
STRUCTURAL MODELS
AMINO ACIDS
SPATIAL DISTRIBUTION
DATA BASE MANAGEMENT