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Chapter 5 Trace metal nutrition and response to deficiency

Book ·
None
Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Biological and Environmental Research (BER) (SC-BER)
DOE Contract Number:
AC02-05CH11231
OSTI ID:
2476186
Country of Publication:
United States
Language:
English

References (188)

Differential requirement of two homologous proteins encoded by sll1214 and sll1874 for the reaction of Mg protoporphyrin monomethylester oxidative cyclase under aerobic and micro-oxic growth conditions journal December 2009
An Arabidopsis thaliana high-affinity molybdate transporter required for efficient uptake of molybdate from soil journal November 2007
Role in metal homeostasis of CtpD, a Co2+ transporting P1B4-ATPase of Mycobacterium smegmatis: Mycobacteria Co2+-ATPase journal May 2012
Algae and humans share a molybdate transporter journal April 2011
The Fox1 ferroxidase of Chlamydomonas reinhardtii: a new multicopper oxidase structural paradigm journal November 2008
Cloning and Characterization of High-CO2-Specific cDNAs from a Marine Microalga, Chlorococcum littorale, and Effect of CO2 Concentration and Iron Deficiency on the Gene Expression journal February 1998
Three mammalian cytochromes b561 are ascorbate‐dependent ferrireductases journal July 2006
Phylogenetic and functional analysis of the Cation Diffusion Facilitator (CDF) family: improved signature and prediction of substrate specificity journal January 2007
Order of Stability of Metal Complexes journal November 1948
Unconventional transport of metal ions and protons by Nramps journal November 2019
Adaptation to Fe-deficiency requires remodeling of the photosynthetic apparatus journal December 2002
FER1 and FER2 Encoding Two Ferritin Complexes in Chlamydomonas reinhardtii Chloroplasts Are Regulated by Iron journal May 2008
Host origin of plastid solute transporters in the first photosynthetic eukaryotes journal January 2007
Femtomolar Sensitivity of Metalloregulatory Proteins Controlling Zinc Homeostasis journal June 2001
Metal Ion Chaperone Function of the Soluble Cu(I) Receptor Atx1 journal October 1997
PIC1, an Ancient Permease in Arabidopsis Chloroplasts, Mediates Iron Transport journal March 2007
Identification of novel proteins in isolated polyphosphate vacuoles in the primitive red alga Cyanidioschyzon merolae: Novel proteins comprising polyphosphate vacuoles journal December 2009
Metal Preferences and Metallation journal August 2014
Fine control of metal concentrations is necessary for cells to discern zinc from cobalt journal December 2017
Genetic Dissection of Nutritional Copper Signaling in Chlamydomonas Distinguishes Regulatory and Target Genes journal October 2004
MOLYBDENUM DEPENDENCE, NITRATE UPTAKE AND PHOTOSYNTHESIS OF FRESHWATER PLANKTON ALGAE1,2 journal September 1975
Selective Electrodiffusion of Zinc Ions in a Zrt-, Irt-like Protein, ZIPB journal September 2010
Photo-oxidative Stress Impacts the Expression of Genes Encoding Iron Metabolism Components in Chlamydomonas journal November 2008
The Crd1 gene encodes a putative di-iron enzyme required for photosystem I accumulation in copper deficiency and hypoxia in Chlamydomonas reinhardtii journal May 2000
Structural basis of ion transport and inhibition in ferroportin journal November 2020
Natural resistance to infection with intracellular parasites: Isolation of a candidate for Bcg journal May 1993
N-terminal Processing of Lhca3 Is a Key Step in Remodeling of the Photosystem I-Light-harvesting Complex Under Iron Deficiency in Chlamydomonas reinhardtii journal March 2005
The soybean NRAMP homologue, GmDMT1, is a symbiotic divalent metal transporter capable of ferrous iron transport journal August 2003
Acidocalcisomes ? conserved from bacteria to man journal March 2005
abc3 + Encodes an Iron-Regulated Vacuolar ABC-Type Transporter in Schizosaccharomyces pombe journal January 2010
Copper Response Element and Crr1-Dependent Ni 2+ -Responsive Promoter for Induced, Reversible Gene Expression in Chlamydomonas reinhardtii journal October 2003
HMA1 and PAA1, two chloroplast-envelope PIB-ATPases, play distinct roles in chloroplast copper homeostasis journal February 2014
Induction of the ZRC1 Metal Tolerance Gene in Zinc-limited Yeast Confers Resistance to Zinc Shock journal January 2003
Zng1 is a GTP-dependent zinc transferase needed for activation of methionine aminopeptidase journal May 2022
Multi-genomic analysis of the cation diffusion facilitator transporters from algae journal March 2020
Differential Expression of the Chlamydomonas [FeFe]-Hydrogenase-Encoding HYDA1 Gene Is Regulated by the COPPER RESPONSE REGULATOR1 journal June 2012
Ni induces the CRR1-dependent regulon revealing overlap and distinction between hypoxia and Cu deficiency responses in Chlamydomonas reinhardtii journal January 2016
Ferritin is required for rapid remodeling of the photosynthetic apparatus and minimizes photo-oxidative stress in response to iron availability in Chlamydomonas reinhardtii journal July 2008
The Synechocystis Manganese Exporter Mnx Is Essential for Manganese Homeostasis in Cyanobacteria journal January 2017
A C2H2 Zinc Finger Protein FEMU2 Is Required for fox1 Expression in Chlamydomonas reinhardtii journal December 2014
The Plastid Envelope CHLOROPLAST MANGANESE TRANSPORTER1 Is Essential for Manganese Homeostasis in Arabidopsis journal July 2018
The role of cysteine residues in the transport of mercuric ions by the Tn501 MerT and MerP mercury-resistance proteins journal July 1995
Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms journal March 2018
COPPER RESPONSE REGULATOR1–Dependent and –Independent Responses of the Chlamydomonas reinhardtii Transcriptome to Dark Anoxia journal September 2013
Heavy Metal-Activated Synthesis of Peptides in Chlamydomonas reinhardtii journal January 1992
The Iron Assimilatory Protein, FEA1, from Chlamydomonas reinhardtii Facilitates Iron-Specific Metal Uptake in Yeast and Plants journal January 2011
The Polyphosphate Bodies of Chlamydomonas reinhardtii Possess a Proton-pumping Pyrophosphatase and Are Similar to Acidocalcisomes journal September 2001
Zinc transporter ZIP13 suppresses beige adipocyte biogenesis and energy expenditure by regulating C/EBP-β expression journal August 2017
How do bacterial cells ensure that metalloproteins get the correct metal? journal January 2009
Iron uptake proteins in algae and the role of Iron Starvation-Induced Proteins (ISIPs) journal June 2020
The ins and outs of algal metal transport journal September 2012
Deletion of CGLD1 Impairs PSII and Increases Singlet Oxygen Tolerance of Green Alga Chlamydomonas reinhardtii journal December 2017
The Metabolic Status Drives Acclimation of Iron Deficiency Responses in Chlamydomonas reinhardtii as Revealed by Proteomics Based Hierarchical Clustering and Reverse Genetics journal July 2013
Zinc Deficiency Impacts CO 2 Assimilation and Disrupts Copper Homeostasis in Chlamydomonas reinhardtii journal February 2013
Lysosome-related Organelles as Mediators of Metal Homeostasis journal August 2014
Conservation of ethylene as a plant hormone over 450 million years of evolution journal January 2015
Single-cell visualization and quantification of trace metals in Chlamydomonas lysosome-related organelles journal April 2021
Alteration of Proteins and Pigments Influence the Function of Photosystem I under Iron Deficiency from Chlamydomonas reinhardtii journal April 2012
FEA1 , FEA2 , and FRE1 , Encoding Two Homologous Secreted Proteins and a Candidate Ferrireductase, Are Expressed Coordinately with FOX1 and FTR1 in Iron-Deficient Chlamydomonas reinhardtii journal July 2007
Anaerobic Expression of the Ferredoxin-Encoding FDX5 Gene of Chlamydomonas reinhardtii Is Regulated by the Crr1 Transcription Factor journal September 2010
X-ray structures of the high-affinity copper transporter Ctr1 journal March 2019
Divalent metal transport in the green microalga Chlamydomonas reinhardtii is mediated by a protein similar to prokaryotic Nramp homologues journal February 2005
Between a rock and a hard place: Trace element nutrition in Chlamydomonas journal July 2006
Inner Envelope CHLOROPLAST MANGANESE TRANSPORTER 1 Supports Manganese Homeostasis and Phototrophic Growth in Arabidopsis journal July 2018
Iron deficiency response gene Femu2 plays a positive role in protecting Chlamydomonas reinhardtii against salt stress journal January 2017
Sequence and coexpression analysis of iron-regulated ZIP transporter genes reveals crossing points between iron acquisition strategies in green algae and land plants journal December 2016
Crystal structures of a ZIP zinc transporter reveal a binuclear metal center in the transport pathway journal August 2017
Importance of Post-Translational Modifications for Functionality of a Chloroplast-Localized Carbonic Anhydrase (CAH1) in Arabidopsis thaliana journal June 2011
A high-affinity molybdate transporter in eukaryotes journal December 2007
SLC39A9 (ZIP9) Regulates Zinc Homeostasis in the Secretory Pathway: Characterization of the ZIP Subfamily I Protein in Vertebrate Cells journal May 2009
A structural overview of the zinc transporters in the cation diffusion facilitator family journal April 2019
Newly characterized Golgi-localized family of proteins is involved in calcium and pH homeostasis in yeast and human cells journal April 2013
Crystal structure of plant vacuolar iron transporter VIT1 journal February 2019
Acidocalcisomes: Ultrastructure, Biogenesis, and Distribution in Microbial Eukaryotes journal July 2019
PredAlgo: A New Subcellular Localization Prediction Tool Dedicated to Green Algae journal July 2012
Suppression of oxidative damage by Saccharomyces cerevisiae ATX2, which encodes a manganese-trafficking protein that localizes to Golgi-like vesicles. journal November 1996
Plasma membrane-localized transporter for aluminum in rice journal October 2010
AtIREG2 Encodes a Tonoplast Transport Protein Involved in Iron-dependent Nickel Detoxification in Arabidopsis thaliana Roots journal September 2006
CCC1 Is a Transporter That Mediates Vacuolar Iron Storage in Yeast journal June 2001
GmZIP1 Encodes a Symbiosis-specific Zinc Transporter in Soybean journal February 2002
Iron limitation results in induction of ferricyanide reductase and ferric chelate reductase activities in Chlamydomonas reinhardtii journal February 1998
A Ferroxidase Encoded by FOX1 Contributes to Iron Assimilation under Conditions of Poor Iron Nutrition in Chlamydomonas journal February 2008
Structure of the molybdopterin-bound Cnx1G domain links molybdenum and copper metabolism journal August 2004
Reciprocal Expression of Two Candidate Di-Iron Enzymes Affecting Photosystem I and Light-Harvesting Complex Accumulation journal March 2002
Expression Profiling-Based Identification of CO 2 -Responsive Genes Regulated by CCM1 Controlling a Carbon-Concentrating Mechanism in Chlamydomonas reinhardtii journal July 2004
Molybdenum cofactor amounts in Chlamydomonas reinhardtii depend on the Nit5 gene function related to molybdate transport journal November 2000
New insights into ferritin synthesis and function highlight a link between iron homeostasis and oxidative stress in plants journal May 2009
Subcellular metal imaging identifies dynamic sites of Cu accumulation in Chlamydomonas journal October 2014
HMA1, a New Cu-ATPase of the Chloro plast Envelope, Is Essential for Growth under Adverse Light Conditions journal February 2006
Fine-tuning of Substrate Affinity Leads to Alternative Roles of Mycobacterium tuberculosis Fe2+-ATPases journal May 2016
Simple steps to enable reproducibility: culture conditions affecting Chlamydomonas growth and elemental composition journal July 2022
Phylogenetic Relationships within Cation Transporter Families of Arabidopsis journal August 2001
A Comparative Inventory of Metal Transporters in the Green Alga Chlamydomonas reinhardtii and the Red Alga Cyanidioschizon merolae journal February 2005
A 1-Megadalton Translocation Complex Containing Tic20 and Tic21 Mediates Chloroplast Protein Import at the Inner Envelope Membrane journal June 2009
Glycosylation abnormalities in Gdt1p/TMEM165 deficient cells result from a defect in Golgi manganese homeostasis journal February 2016
The Chloroplast Permease PIC1 Regulates Plant Growth and Development by Directing Homeostasis and Transport of Iron   journal February 2011
A yeast manganese transporter related to the macrophage protein involved in conferring resistance to mycobacteria. journal May 1996
The Effect of Manganese on Chloroplast Structure and Photosynthetic Ability of Chlamydomonas reinhardi journal May 1969
Copper-Dependent Iron Assimilation Pathway in the Model Photosynthetic Eukaryote Chlamydomonas reinhardtii journal October 2002
An inorganic carbon transport system responsible for acclimation specific to air levels of CO2 in Chlamydomonas reinhardtii journal June 2006
Systems and Trans -System Level Analysis Identifies Conserved Iron Deficiency Responses in the Plant Lineage journal October 2012
Analysis of the High-Affinity Iron Uptake System at the Chlamydomonas reinhardtii Plasma Membrane journal March 2010
Ferroportin 3 is a dual‐targeted mitochondrial/chloroplast iron exporter necessary for iron homeostasis in Arabidopsis journal June 2021
Superoxide Dismutases and Superoxide Reductases journal January 2014
Comparative quantitative proteomics to investigate the remodeling of bioenergetic pathways under iron deficiency inChlamydomonas reinhardtii journal November 2007
Identification and Characterization of a Putative Manganese Export Protein in Vibrio cholerae journal October 2016
Structural insights into the LCIB protein family reveals a new group of β-carbonic anhydrases journal December 2016
IRT1, an Arabidopsis Transporter Essential for Iron Uptake from the Soil and for Plant Growth journal June 2002
Manganese co-localizes with calcium and phosphorus in Chlamydomonas acidocalcisomes and is mobilized in manganese-deficient conditions journal September 2019
The yeast ZRT1 gene encodes the zinc transporter protein of a high-affinity uptake system induced by zinc limitation. journal March 1996
MS-desi, a desiccation-related protein in the floral nectar of the evergreen velvet bean (Mucuna sempervirens Hemsl): molecular identification and characterization journal April 2013
COG0523 proteins: a functionally diverse family of transition metal-regulated G3E P-loop GTP hydrolases from bacteria to man journal July 2021
A Nucleus-Encoded Chloroplast Protein Regulated by Iron Availability Governs Expression of the Photosystem I Subunit PsaA in Chlamydomonas reinhardtii   journal February 2015
Chlamydomonas ATX1 is essential for Cu distribution to multiple cupro‐enzymes and maintenance of biomass in conditions demanding cupro‐enzyme‐dependent metabolic pathways journal February 2022
A Putative Chloroplast-Localized Ca 2+ /H + Antiporter CCHA1 Is Involved in Calcium and pH Homeostasis and Required for PSII Function in Arabidopsis journal August 2016
Exploring the N -glycosylation Pathway in Chlamydomonas reinhardtii Unravels Novel Complex Structures journal August 2013
The Involvement of a Multicopper Oxidase in Iron Uptake by the Green Algae Chlamydomonas reinhardtii journal December 2002
A Role for Iron in an Ancient Carbonic Anhydrase journal December 2003
The Proteome of Copper, Iron, Zinc, and Manganese Micronutrient Deficiency in Chlamydomonas reinhardtii journal October 2012
Manganese Deficiency in Chlamydomonas Results in Loss of Photosystem II and MnSOD Function, Sensitivity to Peroxides, and Secondary Phosphorus and Iron Deficiency journal November 2006
Activation of the Carbon Concentrating Mechanism by CO 2 Deprivation Coincides with Massive Transcriptional Restructuring in Chlamydomonas reinhardtii journal May 2012
Tic21 Is an Essential Translocon Component for Protein Translocation across the Chloroplast Inner Envelope Membrane journal August 2006
A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life journal January 2009
Restoration of photosynthetic activity and supercomplexes from severe iron starvation in Chlamydomonas reinhardtii journal January 2021
Evidence for a protein transported through the secretory pathway en route to the higher plant chloroplast journal November 2005
Transcriptome Sequencing Identifies SPL7 -Regulated Copper Acquisition Genes FRO4 / FRO5 and the Copper Dependence of Iron Homeostasis in Arabidopsis journal February 2012
P1B-ATPases – an ancient family of transition metal pumps with diverse functions in plants journal October 2005
Two P-Type ATPases Are Required for Copper Delivery in Arabidopsis thaliana Chloroplasts journal March 2005
A Superoxide Dismutase Capable of Functioning with Iron or Manganese Promotes the Resistance of Staphylococcus aureus to Calprotectin and Nutritional Immunity journal January 2017
Leveraging computational genomics to understand the molecular basis of metal homeostasis journal August 2020
Iron economy in Chlamydomonas reinhardtii journal January 2013
Trophic status of Chlamydomonas reinhardtii influences the impact of iron deficiency on photosynthesis journal June 2010
Copper economy in Chlamydomonas : Prioritized allocation and reallocation of copper to respiration vs. photosynthesis journal February 2015
A Cation-regulated and Proton Gradient-dependent Cation Transporter from Chlamydomonas reinhardtii Has a Role in Calcium and Sodium Homeostasis journal January 2009
Regulation and Localization of Isoforms of the Aerobic Oxidative Cyclase in Chlamydomonas reinhardtii journal November 2008
Homologous Proteins of the Manganese Transporter PAM71 Are Localized in the Golgi Apparatus and Endoplasmic Reticulum journal February 2020
PAA1, a P-Type ATPase of Arabidopsis, Functions in Copper Transport in Chloroplasts journal May 2003
Water molecules mediate zinc mobility in the bacterial zinc diffusion channel ZIPB journal July 2019
A manganese transporter, BB0219 (BmtA), is required for virulence by the Lyme disease spirochete, Borrelia burgdorferi journal March 2009
Synthesis of either Fe- or Mn-superoxide dismutase with an apparently identical protein moiety by an anaerobic bacterium dependent on the metal supplied. journal December 1982
Localization of Iron in Arabidopsis Seed Requires the Vacuolar Membrane Transporter VIT1 journal November 2006
Two Chlamydomonas CTR Copper Transporters with a Novel Cys-Met Motif Are Localized to the Plasma Membrane and Function in Copper Assimilation journal March 2009
Chlamydomonas reinhardtii LFO1 Is an IsdG Family Heme Oxygenase journal August 2017
From the Uncharacterized Protein Family 0016 to the GDT1 family: Molecular insights into a newly-characterized family of cation secondary transporters journal August 2020
Identification of a Functional Homolog of the Yeast Copper Homeostasis Gene ATX1 from Arabidopsis1 journal August 1998
Vacuolar granules in Chlamydomonas reinhardtii: polyphosphate and a 70-kDa polypeptide as major components journal May 2000
Genetic analysis of nitrate reductase-deficient mutants in Chlamydomonas reinhardii journal October 1984
Conserved methionine dictates substrate preference in Nramp-family divalent metal transporters journal August 2016
Golgi/plastid‐type manganese superoxide dismutase involved in heat‐stress tolerance during grain filling of rice journal January 2015
Genetically Programmed Changes in Photosynthetic Cofactor Metabolism in Copper-deficient Chlamydomonas journal July 2016
The Ferroportin Metal Efflux Proteins Function in Iron and Cobalt Homeostasis in Arabidopsis     journal October 2009
Cadmium- and iron-stress-inducible gene expression in the green alga Chlamydomonas reinhardtii : evidence for H43 protein function in iron assimilation journal May 2002
Iron sparing and recycling in a compartmentalized cell journal December 2013
The CRR1 Nutritional Copper Sensor in Chlamydomonas Contains Two Distinct Metal-Responsive Domains journal December 2010
Functional properties of human ferroportin, a cellular iron exporter reactive also with cobalt and zinc journal March 2014
Systems Biology Approach in Chlamydomonas Reveals Connections between Copper Nutrition and Multiple Metabolic Steps journal April 2011
Expression Profiles of Arabidopsis thaliana in Mineral Deficiencies Reveal Novel Transporters Involved in Metal Homeostasis journal September 2003
CrMAPK3 regulates the expression of iron-deficiency-responsive genes in Chlamydomonas reinhardtii journal May 2017
The metal transporter ZIP13 supplies iron into the secretory pathway in Drosophila melanogaster journal July 2014
Interaction of the copper chaperone HAH1 with the Wilson disease protein is essential for copper homeostasis journal November 1999
SQUAMOSA Promoter Binding Protein–Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis journal January 2009
AtHMA1 contributes to the detoxification of excess Zn(II) in Arabidopsis journal May 2009
Evolutionary and comparative analysis of MYB and bHLH plant transcription factors: Plant MYB and bHLH factors journal March 2011
The Transcription Factor ZafA Regulates the Homeostatic and Adaptive Response to Zinc Starvation in Aspergillus fumigatus journal June 2018
A novel iron-regulated metal transporter from plants identified by functional expression in yeast. journal May 1996
Synthesis, nature and utility of universal iron chelator – Siderophore: A review journal July 2018
An Update on the Metabolic Roles of Carbonic Anhydrases in the Model Alga Chlamydomonas reinhardtii journal March 2018
Fe Sparing and Fe Recycling Contribute to Increased Superoxide Dismutase Capacity in Iron-Starved Chlamydomonas reinhardtii journal June 2012
The metal transporter CrNRAMP1 is involved in zinc and cobalt transports in Chlamydomonas reinhardtii journal March 2020
Expression Analysis of Genes Associated with the Induction of the Carbon-Concentrating Mechanism in Chlamydomonas reinhardtii journal March 2008
Staphylococcus lugdunensis IsdG Liberates Iron from Host Heme journal July 2011
Arabidopsis CHL27, located in both envelope and thylakoid membranes, is required for the synthesis of protochlorophyllide journal December 2003
Biochemical Characterization of the Human Copper Transporter Ctr1 journal December 2001
A comparison of methionine, histidine and cysteine in copper(i)-binding peptides reveals differences relevant to copper uptake by organisms in diverse environments journal January 2011
Iron biofortification and homeostasis in transgenic cassava roots expressing the algal iron assimilatory gene, FEA1 journal January 2012
From economy to luxury: Copper homeostasis in Chlamydomonas and other algae journal November 2020
The yeast protein Gdt1p transports Mn2+ ions and thereby regulates manganese homeostasis in the Golgi journal May 2018
PGRL1 Participates in Iron-induced Remodeling of the Photosynthetic Apparatus and in Energy Metabolism in Chlamydomonas reinhardtii journal September 2009
Ultrastructural changes in Chlamydomonas acidophila (Chlorophyta) induced by heavy metals and polyphosphate metabolism journal May 2003
The LZT proteins; the LIV-1 subfamily of zinc transporters journal April 2003
EIN2, a Bifunctional Transducer of Ethylene and Stress Responses in Arabidopsis journal June 1999
Processing and Subcellular Trafficking of ER-Tethered EIN2 Control Response to Ethylene Gas journal August 2012
CAX-ing a wide net: Cation/H + transporters in metal remediation and abiotic stress signalling journal May 2016
A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element journal December 2005
Nramp defines a family of membrane proteins. journal October 1995
Substrate Profile and Metal-ion Selectivity of Human Divalent Metal-ion Transporter-1 journal August 2012
Metal bioremediation by CrMTP4 over-expressing Chlamydomonas reinhardtii in comparison to natural wastewater-tolerant microalgae strains journal June 2017
The Gene Encodes the Low Affinity Zinc Transporter in journal September 1996

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