Utility of parentage‐based tagging for monitoring Coho salmon ( Oncorhynchus kisutch ) in the interior Columbia River basin

Horn, Rebekah L.; Nuetzel, Hayley M.; Johnson, Becky; Kamphaus, Cory; Lovrak, Jon; Mott, Kraig; Newsome, Todd; Narum, Shawn R.

doi:10.1111/eva.13607

Utility of parentage‐based tagging for monitoring Coho salmon ( Oncorhynchus kisutch ) in the interior Columbia River basin

Journal Article · Fri Dec 08 00:00:00 EST 2023 · Evolutionary Applications

DOI:https://doi.org/10.1111/eva.13607· OSTI ID:2229181

^[1]; Nuetzel, Hayley M. ^[2]; Johnson, Becky ^[3]; Kamphaus, Cory ^[4]; Lovrak, Jon ^[5]; Mott, Kraig ^[4]; Newsome, Todd ^[4]; ^[1]

Columbia River Inter‐Tribal Fish Commission, Hagerman Genetics Lab Hagerman Idaho USA
Columbia River Inter‐Tribal Fish Commission Portland Oregon USA
Nez Perce Tribal Fisheries Grangeville Idaho USA
Yakama Nation Fisheries Toppenish Washington USA
Conferdated Tribes of the Umatilla Indian Reservation Pendleton Oregon USA

Abstract By the 1980s, after decades of declining numbers in the mid‐1900s, Coho salmon ( Oncorhynchus kisutch ) were considered extirpated from the interior Columbia River. In the mid‐1990s, the Confederated Tribes of the Umatilla Indian Reservation, the Confederated Tribes and Bands of the Yakama Nation, and the Nez Perce Tribe began successful reintroduction programs of Coho salmon upstream of Bonneville Dam, but which were initially sourced from lower Columbia River hatcheries. Here we present the first Coho salmon parentage‐based tagging (PBT) baseline from seven hatchery programs located in the interior Columbia River basin, and two sites at or downstream of Bonneville Dam, composed of over 32,000 broodstock samples. Analyses of baseline collections revealed that genetic structure followed a temporal pattern based on 3‐year broodlines rather than geographic location or stocking history. Across hatchery programs, similar levels of genetic diversity was present. The PBT baseline provided multiple direct applications such as identification of origin for Coho salmon collected in a mixed stock at Priest Rapids Dam and the detection of the proportion and distribution of hatchery‐origin fish on the spawning grounds in the Methow River basin. The PBT baseline for Coho salmon is freely available for use and can be downloaded from FishGen.net .

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Sponsoring Organization:: USDOE

OSTI ID:: 2229181

Alternate ID(s):: OSTI ID: 2229184

Journal Information:: Evolutionary Applications, Journal Name: Evolutionary Applications Vol. 17 Journal Issue: 2; ISSN 1752-4571

Publisher:: Wiley-BlackwellCopyright Statement

Country of Publication:: United Kingdom

Language:: English

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