MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
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journal
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May 2018 |
Effective isolation of bacterioplankton genus Polynucleobacter from freshwater environments grown on photochemically degraded dissolved organic matter: Isolation and ecological aspects of Polynucleobacter
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January 2009 |
Shifting the genomic gold standard for the prokaryotic species definition
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journal
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October 2009 |
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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journal
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October 2015 |
MODELTEST: testing the model of DNA substitution
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October 1998 |
Spatio-temporal niche separation of planktonicBetaproteobacteriain an oligo-mesotrophic lake
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August 2008 |
Advenella incenata gen. nov., sp. nov., a novel member of the Alcaligenaceae, isolated from various clinical samples
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journal
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January 2005 |
Draft genome and description of Orrella dioscoreae gen. nov. sp. nov., a new species of Alcaligenaceae isolated from leaf acumens of Dioscorea sansibarensis
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journal
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January 2017 |
Bordetella bronchialis sp. nov., Bordetella flabilis sp. nov. and Bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as Verticia sediminum gen. nov., comb. nov.
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journal
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October 2015 |
It's all relative: ranking the diversity of aquatic bacterial communities
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September 2008 |
Polynucleobacter meluiroseus sp. nov., a bacterium isolated from a lake located in the mountains of the Mediterranean island of Corsica
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June 2018 |
Complete ecological isolation and cryptic diversity in Polynucleobacter bacteria not resolved by 16S rRNA gene sequences
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March 2016 |
Achromobacter sediminum sp. nov., isolated from deep subseafloor sediment of South Pacific Gyre
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July 2014 |
Comparative 16S rRNA Analysis of Lake Bacterioplankton Reveals Globally Distributed Phylogenetic Clusters Including an Abundant Group of Actinobacteria
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November 2000 |
Yellowstone Lake: high-energy geochemistry and rich bacterial diversity
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March 2011 |
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
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March 2010 |
A Guide to the Natural History of Freshwater Lake Bacteria
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March 2011 |
Aerobic Anoxygenic Photosynthesis Is Commonly Present within the Genus Limnohabitans
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journal
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January 2018 |
Improvement of Phylogenies after Removing Divergent and Ambiguously Aligned Blocks from Protein Sequence Alignments
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journal
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August 2007 |
In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake
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journal
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December 2012 |
Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers
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journal
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January 2002 |
Achromobacter panacis sp. nov., isolated from rhizosphere of Panax ginseng
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journal
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May 2017 |
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
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journal
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August 2018 |
Pusillimonas noertemannii gen. nov., sp. nov., a new member of the family Alcaligenaceae that degrades substituted salicylates
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journal
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May 2005 |
Rapid Screening for Freshwater Bacterial Groups by Using Reverse Line Blot Hybridization
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journal
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October 2003 |
Aquirufa antheringensis gen. nov., sp. nov. and Aquirufa nivalisilvae sp. nov., representing a new genus of widespread freshwater bacteria
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journal
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September 2019 |
Saccharedens versatilis gen. nov., sp. nov., a sugar-degrading member of the Burkholderiales isolated from Cephalotes rohweri ant guts
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journal
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February 2017 |
Parvibium lacunae gen. nov., sp. nov., a new member of the family Alcaligenaceae isolated from a freshwater pond
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journal
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April 2018 |
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
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journal
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November 2014 |
Phylogenetic diversity, composition and distribution of bacterioplankton community in the Dongjiang River, China
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journal
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January 2012 |
Ecological niche separation in the Polynucleobacter subclusters linked to quality of dissolved organic matter: a demonstration using a high sensitivity cultivation-based approach: Niche separation of Polynucleobacter communities
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journal
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July 2012 |
Intra- and Intergeneric Similarities of the Bordetella Ribosomal Ribonucleic Acid Cistrons: Proposal for a New Family, Alcaligenaceae
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journal
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July 1986 |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
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journal
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January 2014 |
A Genus Definition for Bacteria and Archaea Based on a Standard Genome Relatedness Index
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journal
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January 2020 |
Variability of Prokaryotic Community Structure in a Drinking Water Reservoir (Marathonas, Greece)
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journal
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January 2012 |
The filtration–acclimatization method for isolation of an important fraction of the not readily cultivable bacteria
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June 2004 |
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
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journal
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May 2012 |
Members of a Readily Enriched -Proteobacterial Clade Are Common in Surface Waters of a Humic Lake
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November 2003 |
Achromobacter gen. nov. and Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) nom. rev.
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journal
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October 1981 |
Growth rates and tolerance to low water temperatures of freshwater bacterioplankton strains: ecological insights from shallow hypereutrophic lakes in Japan
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journal
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November 2016 |
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
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journal
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September 2017 |
List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
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November 2020 |
Bacterial Community Structure of Acid-Impacted Lakes: What Controls Diversity?
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journal
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February 2008 |
Using the Velvet de novo Assembler for Short‐Read Sequencing Technologies
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journal
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September 2010 |
Fast gapped-read alignment with Bowtie 2
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journal
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March 2012 |
Aurantimicrobium photophilum sp. nov., a non-photosynthetic bacterium adjusting its metabolism to the diurnal light cycle and reclassification of Cryobacterium mesophilum as Terrimesophilobacter mesophilus gen. nov., comb. nov.
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journal
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August 2021 |
Riverine Bacterial Communities Reveal Environmental Disturbance Signatures within the Betaproteobacteria and Verrucomicrobia
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journal
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September 2016 |
Algicoccus marinus gen. nov. sp. nov., a marine bacterium isolated from the surface of brown seaweed Laminaria japonica
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journal
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April 2019 |
Orrella amnicola sp. nov., isolated from a freshwater river, reclassification of Algicoccus marinus as Orrella marina comb. nov., and emended description of the genus Orrella
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journal
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December 2020 |
Bacterial communities and greenhouse gas emissions of shallow ponds in the High Arctic
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journal
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August 2014 |
Bacterioplankton Community Composition along a Salinity Gradient of Sixteen High-Mountain Lakes Located on the Tibetan Plateau, China
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journal
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August 2006 |
The enveomics collection: a toolbox for specialized analyses of microbial genomes and metagenomes
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preprint
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March 2016 |
Ampullimonas aquatilis gen. nov., sp. nov. isolated from bottled mineral water
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journal
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March 2016 |
Opening a next‐generation black box: Ecological trends for hundreds of species‐like taxa uncovered within a single bacterial >99% 16S rRNA operational taxonomic unit
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journal
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June 2021 |
Seasonal Community and Population Dynamics of Pelagic Bacteria and Archaea in a High Mountain Lake
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November 1998 |
Reclassification of four Polynucleobacter necessarius strains as representatives of Polynucleobacter asymbioticus comb. nov., Polynucleobacter duraquae sp. nov., Polynucleobacter yangtzensis sp. nov. and Polynucleobacter sinensis sp. nov., and emended description of Polynucleobacter necessarius
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journal
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August 2016 |
IMG/M: integrated genome and metagenome comparative data analysis system
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journal
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October 2016 |
Proposal of Verticiella gen. nov. as replacement for the illegitimate prokaryotic genus name Verticia Vandamme et al. 2015
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journal
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December 2016 |
Caenimicrobium hargitense gen. nov., sp. nov., a new member of the family Alcaligenaceae (Betaproteobacteria) isolated from activated sludge
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journal
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March 2017 |
Reclassification of Alcaligenes latus strains IAM 12599T and IAM 12664 and Pseudomonas saccharophila as Azohydromonas lata gen. nov., comb. nov., Azohydromonas australica sp. nov. and Pelomonas saccharophila gen. nov., comb. nov., respectively
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journal
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November 2005 |