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Visualizing how inclusion of higher reciprocal space in SWAXS data analysis improves shape restoration of biomolecules: case of lysozyme

Journal Article · · Journal of Biomolecular Structure and Dynamics
 [1]
  1. CSIR-Institute of Microbial Technology, Chandigarh, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India

Not provided.

Research Organization:
Brookhaven National Laboratory (BNL), Upton, NY (United States). National Synchrotron Light Source II (NSLS-II)
Sponsoring Organization:
USDOE Office of Science (SC)
DOE Contract Number:
SC0012704
OSTI ID:
1982416
Journal Information:
Journal of Biomolecular Structure and Dynamics, Vol. 40, Issue 23; ISSN 0739-1102
Publisher:
Taylor & Francis
Country of Publication:
United States
Language:
English

References (41)

A novel function of Mycobacterium tuberculosis chaperonin paralog GroEL1 in copper homeostasis September 2020
Global Structure Changes Associated with Ca 2+ Activation of Full-length Human Plasma Gelsolin June 2007
Visualizing Temperature Mediated Activation of Gelsolin and Its Deactivation By Pip2: A Saxs Based Study July 2017
Integrative approaches in cryogenic electron microscopy: Recent advances in structural biology and future perspectives February 2021
Experimental Evidence for a Cluster Glass Transition in Concentrated Lysozyme Solutions February 2019
Lysozyme Hydration in Concentrated Aqueous Solutions. Effect of an Equilibrium Cluster Phase December 2012
Cluster-Driven Dynamical Arrest in Concentrated Lysozyme Solutions June 2011
Disentangling polydispersity in the PCNA−p15PAF complex, a disordered, transient and multivalent macromolecular assembly November 2016
Quantitative NMR-Based Biomedical Metabolomics: Current Status and Applications November 2020
ATSAS 2.8 : a comprehensive data analysis suite for small-angle scattering from macromolecular solutions June 2017
DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering January 2009
Preparing Better Samples for Cryo–Electron Microscopy: Biochemical Challenges Do Not End with Isolation and Purification June 2021
Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS) July 2009
Small-angle scattering for structural biology-Expanding the frontier while avoiding the pitfalls January 2010
WAXSiS: a web server for the calculation of SAXS/WAXS curves based on explicit-solvent molecular dynamics April 2015
Atomic-resolution structural information from scattering experiments on macromolecules in solution May 2013
Automated matching of high- and low-resolution structural models February 2001
Combined Nuclear Magnetic Resonance Spectroscopy and Mass Spectrometry Approaches for Metabolomics November 2020
Molecular Crowding Inhibits Intramolecular Breathing Motions in Proteins January 2008
Solution Structure Analysis of Cytoplasmic Domain of Podocyte Protein Neph1 Using Small/Wide Angle X-ray Scattering (SWAXS) March 2012
Low pH Overrides the Need of Calcium Ions for the Shape–Function Relationship of Calmodulin: Resolving Prevailing Debates May 2014
Deciphering conformational transitions of proteins by small angle X-ray scattering and normal mode analysis January 2016
Hydration-Induced Structural Changes in the Solid State of Protein: A SAXS/WAXS Study on Lysozyme August 2020
Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law April 2011
Targeting Neph1 and ZO-1 protein-protein interaction in podocytes prevents podocyte injury and preserves glomerular filtration function September 2017
Search for non-lactam inhibitors of mtb β-lactamase led to its open shape in apo state: new concept for antibiotic design July 2017
Structural Analyses of Intrinsically Disordered Proteins by Small-Angle X-Ray Scattering July 2020
A refined solution structure of hen lysozyme determined using residual dipolar coupling data April 2001
Heat induces end to end repetitive association in P. furiosus l-asparaginase which enables its thermophilic property December 2020
Characterization of heat induced spherulites of lysozyme reveals new insight on amyloid initiation March 2016
Absence of equilibrium cluster phase in concentrated lysozyme solutions March 2008
Biochemical characterization of ClpB protein from Mycobacterium tuberculosis and identification of its small-molecule inhibitors December 2020
Global Shape and Ligand Binding Efficiency of the HIV-1-neutralizing Antibodies Differ from Those of Antibodies That Cannot Neutralize HIV-1 December 2014
A Small-Angle Scattering Study on Equilibrium Clusters in Lysozyme Solutions October 2006
Equilibrium cluster formation in concentrated protein solutions and colloids November 2004
Determination of the regularization parameter in indirect-transform methods using perceptual criteria August 1992
Restoring Low Resolution Structure of Biological Macromolecules from Solution Scattering Using Simulated Annealing June 1999
CRYSOL – a Program to Evaluate X-ray Solution Scattering of Biological Macromolecules from Atomic Coordinates December 1995
Modeling the Hydration Layer around Proteins: Applications to Small- and Wide-Angle X-Ray Scattering October 2011
Uniqueness of ab initio shape determination in small-angle scattering April 2003
A Rare Lysozyme Crystal Form Solved Using Highly Redundant Multiple Electron Diffraction Datasets from Micron-Sized Crystals April 2018

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