Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Ancient plant-like terpene biosynthesis in corals

Journal Article · · Nature Chemical Biology

Not provided.

Research Organization:
SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States). Stanford Synchrotron Radiation Lightsource (SSRL)
Sponsoring Organization:
USDOE
DOE Contract Number:
AC02-76SF00515
OSTI ID:
1982159
Journal Information:
Nature Chemical Biology, Vol. 18, Issue 6; ISSN 1552-4450
Publisher:
Nature Publishing Group
Country of Publication:
United States
Language:
English

References (63)

Structural and Chemical Biology of Terpenoid Cyclases journal August 2017
Terpene Synthases as Metabolic Gatekeepers in the Evolution of Plant Terpenoid Chemical Diversity journal October 2019
Bacterial terpene cyclases journal January 2016
Traversing the fungal terpenome journal January 2014
Terpene synthase genes in eukaryotes beyond plants and fungi: Occurrence in social amoebae journal October 2016
Promotion of microtubule assembly in vitro by taxol journal February 1979
Artemisinins target the SERCA of Plasmodium falciparum journal August 2003
CMNPD: a comprehensive marine natural products database towards facilitating drug discovery from the ocean journal September 2020
Volatile secondary metabolites as aposematic olfactory signals and defensive weapons in aquatic environments journal March 2017
Diterpenes from gorgonian corals journal January 2009
Diving into the world of marine 2,11-cyclized cembranoids: a summary of new compounds and their biological activities journal January 2020
The pseudopterosins: anti-inflammatory and analgesic natural products from the sea whip Pseudopterogorgia elisabethae. journal September 1986
Pachycladins A−E, Prostate Cancer Invasion and Migration Inhibitory Eunicellin-Based Diterpenoids from the Red Sea Soft Coral Cladiella pachyclados journal April 2010
Lophotoxin: a Novel Neuromuscular Toxin from Pacific Sea Whips of the Genus Lophogorgia journal June 1981
An environmental bacterial taxon with a large and distinct metabolic repertoire journal January 2014
Accessing chemical diversity from the uncultivated symbionts of small marine animals journal January 2018
Identification of the Putative Bryostatin Polyketide Synthase Gene Cluster from “ Candidatus Endobugula sertula”, the Uncultivated Microbial Symbiont of the Marine Bryozoan Bugula neritina journal December 2006
Using the Acropora digitifera genome to understand coral responses to environmental change journal July 2011
Highlights of marine natural products having parallel scaffolds found from marine-derived bacteria, sponges, and tunicates journal June 2020
Pseudopterosin Biosynthesis in Symbiodinium sp., the Dinoflagellate Symbiont of Pseudopterogorgia elisabethae journal November 2003
The Effect of Bleaching on the Terpene Chemistry of Plexaurella fusifera: Evidence that Zooxanthellae Are Not Responsible for Sesquiterpene Production journal April 2008
Identification and characterization of the pseudopterosin diterpene cyclase, elisabethatriene synthase, from the marine gorgonian, Pseudopterogorgia elisabethae journal April 2004
Terpene Biosynthesis in Red Algae Is Catalyzed by Microbial Type But Not Typical Plant Terpene Synthases journal December 2018
Terpene synthases are widely distributed in bacteria journal December 2014
Pfam: The protein families database in 2021 journal October 2020
The Draft Genome of an Octocoral, Dendronephthya gigantea journal March 2019
Synthesis of Xenia diterpenoids and related metabolites isolated from marine organisms journal December 2015
Lineage dynamics of the endosymbiotic cell type in the soft coral Xenia journal June 2020
Inference of Macromolecular Assemblies from Crystalline State journal September 2007
Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi -Isozizaene Synthase journal February 2014
Taxadiene synthase structure and evolution of modular architecture in terpene biosynthesis journal December 2010
Human farnesyl pyrophosphate synthase is allosterically inhibited by its own product journal January 2017
Phylogenomics, Origin, and Diversification of Anthozoans (Phylum Cnidaria) journal January 2021
Mining genomes to illuminate the specialized chemistry of life journal June 2021
Plant metabolic clusters – from genetics to genomics journal April 2016
Rerouting plant terpene biosynthesis enables momilactone pathway elucidation journal October 2020
The capnellenes revisited: New structures and new biological activity journal October 1998
Capnellene, a natural marine compound derived from soft coral, attenuates chronic constriction injury-induced neuropathic pain in rats: The effects of capnellene on neuropathy journal August 2009
Terpenoids LXXV. Δ9(12)-capnellene, a new sesquiterpene hydrocarbon from the soft coral journal January 1978
Gene expression profiling reveals deep-sea coral response to the Deepwater Horizon oil spill journal September 2018
Force-dependent discharge of nematocysts in the sea anemone Haliplanella luciae (Verrill) journal May 2012
Accelerated Profile HMM Searches journal October 2011
Full-length transcriptome assembly from RNA-Seq data without a reference genome journal May 2011
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis journal July 2013
Sequenceserver: A Modern Graphical User Interface for Custom BLAST Databases journal August 2019
Kalign2: high-performance multiple alignment of protein and nucleotide sequences allowing external features journal December 2008
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms journal May 2018
Deciphering key features in protein structures with the new ENDscript server journal April 2014
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era journal February 2020
XDS journal January 2010
Automatic protein structure solution from weak X-ray data journal November 2013
Overview of the CCP 4 suite and current developments journal March 2011
Substructure solution with SHELXD journal September 2002
Recent developments in classical density modification journal March 2010
Multivariate phase combination improves automated crystallographic model building journal June 2010
The Buccaneer software for automated model building. 1. Tracing protein chains journal August 2006
Features and development of Coot journal March 2010
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix journal October 2019
A coral mitochondrial mutS gene journal May 1995
Molecular phylogenetic analyses of shallow-water Caribbean octocorals journal February 2003
Trimmomatic: a flexible trimmer for Illumina sequence data journal April 2014
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing journal May 2012
Autometa: automated extraction of microbial genomes from individual shotgun metagenomes journal March 2019