Probing the Structure of DNA−Carbon Nanotube Hybrids with Molecular Dynamics
|
journal
|
January 2008 |
Flexible Fitting of Atomic Structures into Electron Microscopy Maps Using Molecular Dynamics
|
journal
|
May 2008 |
Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics
|
journal
|
May 2013 |
Molecular dynamics of a model S N 2 reaction in water
|
journal
|
February 1987 |
Computer Simulation of Molecular Dynamics: Methodology, Applications, and Perspectives in Chemistry
|
journal
|
September 1990 |
Chemical reaction rates from ring polymer molecular dynamics
|
journal
|
February 2005 |
The Diabatic Picture of Electron Transfer, Reaction Barriers, and Molecular Dynamics
|
journal
|
March 2010 |
Observation of theA-DNA toB-DNA Transition During Unrestrained Molecular Dynamics in Aqueous Solution
|
journal
|
June 1996 |
Molecular dynamics simulations of biomolecules
|
journal
|
September 2002 |
Structural properties of water confined by phospholipid membranes
|
journal
|
July 2017 |
Isotope effects in liquid water via deep potential molecular dynamics
|
journal
|
October 2019 |
Unified Approach for Molecular Dynamics and Density-Functional Theory
|
journal
|
November 1985 |
Perspective: Fifty years of density-functional theory in chemical physics
|
journal
|
May 2014 |
Thirty years of density functional theory in computational chemistry: an overview and extensive assessment of 200 density functionals
|
journal
|
April 2017 |
Density functional theory is straying from the path toward the exact functional
|
journal
|
January 2017 |
Comment on “Density functional theory is straying from the path toward the exact functional”
|
journal
|
May 2017 |
A conundrum for density functional theory
|
journal
|
January 2017 |
Response to Comment on “Density functional theory is straying from the path toward the exact functional”
|
journal
|
May 2017 |
Recent developments in libxc — A comprehensive library of functionals for density functional theory
|
journal
|
January 2018 |
Perspective: Advances and challenges in treating van der Waals dispersion forces in density functional theory
|
journal
|
September 2012 |
Dispersion-Corrected Mean-Field Electronic Structure Methods
|
journal
|
April 2016 |
First-Principles Models for van der Waals Interactions in Molecules and Materials: Concepts, Theory, and Applications
|
journal
|
March 2017 |
van der Waals forces in density functional theory: a review of the vdW-DF method
|
journal
|
May 2015 |
Insights into Current Limitations of Density Functional Theory
|
journal
|
August 2008 |
The individual and collective effects of exact exchange and dispersion interactions on the ab initio structure of liquid water
|
journal
|
August 2014 |
Collective many-body van der Waals interactions in molecular systems
|
journal
|
August 2012 |
Reliable and practical computational description of molecular crystal polymorphs
|
journal
|
January 2019 |
Scaling forces to asteroid surfaces: The role of cohesion
|
journal
|
December 2010 |
Cohesive forces prevent the rotational breakup of rubble-pile asteroid (29075) 1950 DA
|
journal
|
August 2014 |
First Principles Simulations of the Infrared Spectrum of Liquid Water Using Hybrid Density Functionals
|
journal
|
March 2011 |
Structural and Vibrational Properties of Liquid Water from van der Waals Density Functionals
|
journal
|
August 2011 |
First-Principles Simulations of Liquid Water Using a Dielectric-Dependent Hybrid Functional
|
journal
|
May 2018 |
The impact of the self-interaction error on the density functional theory description of dissociating radical cations: Ionic and covalent dissociation limits
|
journal
|
January 2004 |
Quantifying the effects of the self-interaction error in DFT: When do the delocalized states appear?
|
journal
|
June 2005 |
Pervasive Delocalisation Error Causes Spurious Proton Transfer in Organic Acid-Base Co-Crystals
|
journal
|
October 2018 |
Hybrid functionals applied to extended systems
|
journal
|
January 2008 |
Exchange-hole dipole moment and the dispersion interaction revisited
|
journal
|
October 2007 |
A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu
|
journal
|
April 2010 |
Extension of the D3 dispersion coefficient model
|
journal
|
July 2017 |
Many-body van der Waals interactions in molecules and condensed matter
|
journal
|
May 2014 |
Long-range correlation energy calculated from coupled atomic response functions
|
journal
|
May 2014 |
Analytical nuclear gradients for the range-separated many-body dispersion model of noncovalent interactions
|
journal
|
January 2016 |
Higher-accuracy van der Waals density functional
|
journal
|
August 2010 |
Density‐functional thermochemistry. III. The role of exact exchange
|
journal
|
April 1993 |
Hybrid functionals based on a screened Coulomb potential
|
journal
|
May 2003 |
Robust Periodic Hartree−Fock Exchange for Large-Scale Simulations Using Gaussian Basis Sets
|
journal
|
October 2009 |
A scalable and accurate algorithm for the computation of Hartree–Fock exchange
|
journal
|
May 2010 |
Parallel implementation of γ-point pseudopotential plane-wave DFT with exact exchange
|
journal
|
November 2010 |
Improved treatment of exact exchange in Quantum ESPRESSO
|
journal
|
May 2017 |
Enhancement of DFT-calculations at petascale: Nuclear Magnetic Resonance, Hybrid Density Functional Theory and Car–Parrinello calculations
|
journal
|
August 2013 |
Auxiliary Density Matrix Methods for Hartree−Fock Exchange Calculations
|
journal
|
July 2010 |
Interpolative Separable Density Fitting Decomposition for Accelerating Hybrid Density Functional Calculations with Applications to Defects in Silicon
|
journal
|
October 2017 |
Interpolative Separable Density Fitting through Centroidal Voronoi Tessellation with Applications to Hybrid Functional Electronic Structure Calculations
|
journal
|
January 2018 |
Adaptively Compressed Exchange Operator
|
journal
|
April 2016 |
Projected Commutator DIIS Method for Accelerating Hybrid Functional Electronic Structure Calculations
|
journal
|
October 2017 |
Order- N implementation of exact exchange in extended insulating systems
|
journal
|
February 2009 |
Efficient Computation of Hartree–Fock Exchange Using Recursive Subspace Bisection
|
journal
|
December 2012 |
Compressed Representation of Kohn–Sham Orbitals via Selected Columns of the Density Matrix
|
journal
|
March 2015 |
SCDM-k: Localized orbitals for solids via selected columns of the density matrix
|
journal
|
April 2017 |
Exact exchange with non-orthogonal generalized Wannier functions
|
journal
|
March 2017 |
Efficient evaluation of short-range Hartree-Fock exchange in large molecules and periodic systems
|
journal
|
September 2006 |
Ab initio molecular dynamics using hybrid density functionals
|
journal
|
June 2008 |
Fast hybrid density-functional computations using plane-wave basis sets
|
journal
|
February 2019 |
Exact exchange in ab initio molecular dynamics: An efficient plane-wave based algorithm
|
journal
|
March 1998 |
Accurate and efficient method for the treatment of exchange in a plane-wave basis
|
journal
|
February 2006 |
Efficient Computation of the Hartree–Fock Exchange in Real-Space with Projection Operators
|
journal
|
July 2016 |
Enhanced sampling and free energy calculations with hybrid functionals and plane waves for chemical reactions
|
journal
|
October 2018 |
Speeding-up ab initio molecular dynamics with hybrid functionals using adaptively compressed exchange operator based multiple timestepping
|
journal
|
October 2019 |
Efficient computation of free energy surfaces of chemical reactions using ab initio molecular dynamics with hybrid functionals and plane waves
|
journal
|
May 2020 |
Achieving an Order of Magnitude Speedup in Hybrid-Functional- and Plane-Wave-Based Ab Initio Molecular Dynamics: Applications to Proton-Transfer Reactions in Enzymes and in Solution
|
journal
|
March 2021 |
Enabling Large-Scale Condensed-Phase Hybrid Density Functional Theory Based Ab Initio Molecular Dynamics. 1. Theory, Algorithm, and Performance
|
journal
|
February 2020 |
QUANTUM ESPRESSO: a modular and open-source software project for quantum simulations of materials
|
journal
|
September 2009 |
Analytic Properties of Bloch Waves and Wannier Functions
|
journal
|
August 1959 |
Existence of the exponentially localised Wannier functions
|
journal
|
March 1983 |
Bloch Bundles, Marzari-Vanderbilt Functional and Maximally Localized Wannier Functions
|
journal
|
June 2013 |
Performance and Accuracy of Recursive Subspace Bisection for Hybrid DFT Calculations in Inhomogeneous Systems
|
journal
|
September 2015 |
Local structure analysis in ab initio liquid water
|
journal
|
July 2015 |
A systematic study of chloride ion solvation in water using van der Waals inclusive hybrid density functional theory
|
journal
|
July 2015 |
Hydroxide diffuses slower than hydronium in water because its solvated structure inhibits correlated proton transfer
|
journal
|
March 2018 |
Ab initio molecular dynamics with maximally localized Wannier functions
|
journal
|
January 2003 |
On-the-fly localization of electronic orbitals in Car–Parrinello molecular dynamics
|
journal
|
February 2004 |
Orbital-dependent density functionals: Theory and applications
|
journal
|
January 2008 |
Theory and Applications of Generalized Pipek–Mezey Wannier Functions
|
journal
|
January 2017 |
Multigrid Solvers for Nonaligned Sonic Flows
|
journal
|
January 1999 |
Rationale for mixing exact exchange with density functional approximations
|
journal
|
December 1996 |
Toward reliable density functional methods without adjustable parameters: The PBE0 model
|
journal
|
April 1999 |
A Theory of Water and Ionic Solution, with Particular Reference to Hydrogen and Hydroxyl Ions
|
journal
|
August 1933 |
Unit cells for the simulation of hexagonal ice
|
journal
|
January 1997 |
Computer simulation of hexagonal ice
|
journal
|
October 1977 |
On the accuracy of van der Waals inclusive density-functional theory exchange-correlation functionals for ice at ambient and high pressures
|
journal
|
October 2013 |
Nosé–Hoover chains: The canonical ensemble via continuous dynamics
|
journal
|
August 1992 |
Molecular dynamics simulations of a protein in the canonical ensemble
|
journal
|
December 1993 |
First-principle-constant pressure molecular dynamics
|
journal
|
March 1995 |
Architecture of Qbox: A scalable first-principles molecular dynamics code
|
journal
|
January 2008 |