Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Frigoriflavimonas asaccharolytica gen. nov., sp. nov., a novel psychrophilic esterase and protease producing bacterium isolated from Antarctica

Journal Article · · Antonie van Leeuwenhoek

Not provided.

Research Organization:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States). National Energy Research Scientific Computing Center (NERSC)
Sponsoring Organization:
USDOE
DOE Contract Number:
AC02-05CH11231
OSTI ID:
1981486
Journal Information:
Antonie van Leeuwenhoek, Vol. 114, Issue 12; ISSN 0003-6072
Publisher:
Springer
Country of Publication:
United States
Language:
English

References (58)

Classification of bacteria isolated from a medieval wall painting journal June 1996
KBase: The United States Department of Energy Systems Biology Knowledgebase journal July 2018
The RAST Server: Rapid Annotations using Subsystems Technology journal January 2008
Chryseobacterium frigidisoli sp. nov., a psychrotolerant species of the family Flavobacteriaceae isolated from sandy permafrost from a glacier forefield journal July 2013
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing journal May 2012
Solexa Ltd journal June 2004
Polyamine Pattern as a Chemotaxonomic Marker within the Proteobacteria journal November 1988
Discrimination of Members of the Family Pasteurellaceae Based on Polyamine Patterns journal July 1997
BLAST+: architecture and applications journal January 2009
Biotechnological uses of enzymes from psychrophiles journal March 2011
IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes journal October 2018
Antibiotic Potential of Endophytic Actinomycetes of Medicinal Herbs Against Human Pathogenic Bacteria journal October 2015
Diversity of Cultivable Microbes From Soil of the Fildes Peninsula, Antarctica, and Their Potential Application journal September 2020
Antarctic bioprospecting: in pursuit of microorganisms producing new antimicrobials and enzymes journal March 2018
Regulation of the mazEF Toxin-Antitoxin Module in Staphylococcus aureus and Its Impact on sigB Expression journal April 2009
Estimating Phylogenetic Trees from Distance Matrices journal September 1972
Evolutionary trees from DNA sequences: A maximum likelihood approach journal November 1981
Confidence Limits on Phylogenies: an Approach Using the Bootstrap journal July 1985
Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology journal December 1971
Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes journal September 2019
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities journal January 2007
Genome-Based Taxonomic Classification of Bacteroidetes journal December 2016
The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) journal October 2015
Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa journal October 1996
Description of Chryseobacterium anthropi sp. nov. to accommodate clinical isolates biochemically similar to Kaistella koreensis and Chryseobacterium haifense, proposal to reclassify Kaistella koreensis as Chryseobacterium koreense comb. nov. and emended description of the genus Chryseobacterium journal July 2009
Chryseobacterium gallinarum sp. nov., isolated from a chicken, and Chryseobacterium contaminans sp. nov., isolated as a contaminant from a rhizosphere sample journal January 2014
Chryseobacterium sediminis sp. nov., isolated from a river sediment journal November 2015
Chryseobacterium arachidiradicis sp. nov., isolated from the geocarposphere (soil around the peanut) of very immature peanuts (Arachis hypogaea) journal July 2015
Transfer of Chryseobacterium meningosepticum and Chryseobacterium miricola to Elizabethkingia gen. nov. as Elizabethkingia meningoseptica comb. nov. and Elizabethkingia miricola comb. nov. journal May 2005
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences journal June 1980
PhyD3: a phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization journal May 2017
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets journal March 2016
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains journal August 2014
RNAmmer: consistent and rapid annotation of ribosomal RNA genes journal April 2007
Uncovering the Uncultivated Majority in Antarctic Soils: Toward a Synergistic Approach journal February 2019
Bioprospecting for extracellular enzymes from culturable Actinobacteria from the South Shetland Islands, Antarctica journal May 2016
FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program: Table 1. journal June 2015
Genome sequence-based species delimitation with confidence intervals and improved distance functions journal January 2013
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy journal May 2019
Chryseobacterium hispalense sp. nov., a plant-growth-promoting bacterium isolated from a rainwater pond in an olive plant nursery, and emended descriptions of Chryseobacterium defluvii, Chryseobacterium indologenes, Chryseobacterium wanjuense and Chryseobacterium gregarium journal August 2013
Chryseobacterium oleae sp. nov., an efficient plant growth promoting bacterium in the rooting induction of olive tree (Olea europaea L.) cuttings and emended descriptions of the genus Chryseobacterium, C. daecheongense, C. gambrini, C. gleum, C. joostei, C. jejuense, C. luteum, C. shigense, C. taiwanense, C. ureilyticum and C. vrystaatense journal July 2014
Division of the genus Chryseobacterium: Observation of discontinuities in amino acid identity values, a possible consequence of major extinction events, guides transfer of nine species to the genus Epilithonimonas, eleven species to the genus Kaistella, and three species to the genus Halpernia gen. nov., with description of Kaistella daneshvariae sp. nov. and Epilithonimonas vandammei sp. nov. derived from clinical specimens journal August 2020
Advances in Antarctic Research for Antimicrobial Discovery: A Comprehensive Narrative Review of Bacteria from Antarctic Environments as Potential Sources of Novel Antibiotic Compounds Against Human Pathogens and Microorganisms of Industrial Importance journal October 2018
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes journal May 2015
Mash: fast genome and metagenome distance estimation using MinHash journal June 2016
Chryseobacterium palustre sp. nov. and Chryseobacterium humi sp. nov., isolated from industrially contaminated sediments journal August 2009
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools journal November 2012
The Variety and Inscrutability of Polar Environments as a Resource of Biotechnologically Relevant Molecules journal September 2020
The enveomics collection: a toolbox for specialized analyses of microbial genomes and metagenomes preprint March 2016
Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica journal September 2020
The neighbor-joining method: a new method for reconstructing phylogenetic trees. journal July 1987
Pseudomonas knackmussii sp. nov. journal March 2007
Lipid composition of Halobacterium lacusprofundi journal January 1990
A Comparative Study of the Lipid Composition of Halobacterium saccharovorum from Various Sources journal May 1990
The CspA family in Escherichia coli : multiple gene duplication for stress adaptation journal February 1998
Chryseobacterium treverense sp. nov., isolated from a human clinical source journal October 2009
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies journal May 2017
Description of Chishuiella changwenlii gen. nov., sp. nov., isolated from freshwater, and transfer of Wautersiella falsenii to the genus Empedobacter as Empedobacter falsenii comb. nov. journal August 2014