Uniqueness of ab initio shape determination in small-angle scattering
journal
April 2003
Base pairing between hepatitis C virus RNA and 18S rRNA is required for IRES-dependent translation initiation in vivo
journal
October 2014
The 5BSL3.2 Functional RNA Domain Connects Distant Regions in the Hepatitis C Virus Genome
journal
October 2017
Template Requirement and Initiation Site Selection by Hepatitis C Virus Polymerase on a Minimal Viral RNA Template
journal
June 2000
A Hepatitis C Virus cis-Acting Replication Element Forms a Long-Range RNA-RNA Interaction with Upstream RNA Sequences in NS5B
journal
July 2008
A twist in the tail: SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication
journal
May 2012
NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy
journal
December 2014
The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
journal
March 2008
Comparing SARS-CoV-2 with SARS-CoV and influenza pandemics
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September 2020
Replication of Subgenomic Hepatitis C Virus RNAs in a Hepatoma Cell Line
journal
July 1999
Hepatitis C virus RNA: molecular switches mediated by long-range RNA–RNA interactions?
journal
December 2012
VARNA: Interactive drawing and editing of the RNA secondary structure
journal
April 2009
Secondary structure determination of the conserved 98-base sequence at the 3' terminus of hepatitis C virus genome RNA.
journal
January 1997
The EMBL-EBI search and sequence analysis tools APIs in 2019
journal
April 2019
Structures of flavivirus RNA promoters suggest two binding modes with NS5 polymerase
journal
May 2021
RNApdbee 2.0: multifunctional tool for RNA structure annotation
journal
April 2018
RNA-dependent RNA polymerase of hepatitis C virus binds to its coding region RNA stem-loop structure, 5BSL3.2, and its negative strand
journal
January 2010
Inhibition of hepatitis C virus replication by pol III-directed overexpression of RNA decoys corresponding to stem-loop structures in the NS5B coding region
journal
November 2005
Structural basis for RNA replication by the hepatitis C virus polymerase
journal
February 2015
Low-Temperature NMR Studies on Inosine Wobble Base Pairs
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July 2011
An overview of the Amber biomolecular simulation package: Amber biomolecular simulation package
Salomon-Ferrer, Romelia; Case, David A.; Walker, Ross C.
Wiley Interdisciplinary Reviews: Computational Molecular Science, Vol. 3, Issue 2
https://doi.org/10.1002/wcms.1121
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September 2012
3′ RNA Elements in Hepatitis C Virus Replication: Kissing Partners and Long Poly(U)
journal
October 2007
The hepatitis C virus Core protein is a potent nucleic acid chaperone that directs dimerization of the viral (+) strand RNA in vitro
journal
April 2004
Mutations of the SL2 dimerization sequence of the hepatitis C genome abrogate viral replication
journal
March 2015
Inhibition of HCV translation by disrupting the structure and interactions of the viral CRE and 3′ X-tail
journal
February 2015
Identification of a Conserved RNA-dependent RNA Polymerase (RdRp)-RNA Interface Required for Flaviviral Replication
journal
August 2016
Challenges and Promise of a Hepatitis C Virus Vaccine
journal
September 2019
Determination of the regularization parameter in indirect-transform methods using perceptual criteria
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August 1992
PRIMUS : a Windows PC-based system for small-angle scattering data analysis
journal
September 2003
Accurate assessment of mass, models and resolution by small-angle scattering
journal
April 2013
Functional long-range RNA–RNA interactions in positive-strand RNA viruses
journal
June 2014
Structural characterization of the highly conserved 98-base sequence at the 3' end of HCV RNA genome and the complementary sequence located at the 5' end of the replicative viral strand
journal
January 2005
FoXS, FoXSDock and MultiFoXS: Single-state and multi-state structural modeling of proteins and their complexes based on SAXS profiles
journal
May 2016
The flavivirus-conserved penta-nucleotide in the 3′ stem-loop of the West Nile virus genome requires a specific sequence and structure for RNA synthesis, but not for viral translation
journal
January 2005
Cryo-EM structure of Hepatitis C virus IRES bound to the human ribosome at 3.9-Å resolution
journal
July 2015
Kissing-Loop Interaction in the 3′ End of the Hepatitis C Virus Genome Essential for RNA Replication
journal
January 2005
UCSF Chimera?A visualization system for exploratory research and analysis
journal
January 2004
New developments in the ATSAS program package for small-angle scattering data analysis
journal
March 2012
MolProbity: More and better reference data for improved all-atom structure validation: PROTEIN SCIENCE.ORG
journal
November 2017
The conserved 3′X terminal domain of hepatitis C virus genomic RNA forms a two-stem structure that promotes viral RNA dimerization
journal
August 2015
The functional RNA domain 5BSL3.2 within the NS5B coding sequence influences hepatitis C virus IRES-mediated translation
journal
May 2011
Analysis of hepatitis C virus RNA dimerization and core-RNA interactions
journal
January 2006
Determination of the secondary structure of and cellular protein binding to the 3'-untranslated region of the hepatitis C virus RNA genome.
journal
January 1997
Structure and function analysis of the essential 3′X domain of hepatitis C virus
journal
November 2019
Automated matching of high- and low-resolution structural models
journal
February 2001
Template Requirements for RNA Synthesis by a Recombinant Hepatitis C Virus RNA-Dependent RNA Polymerase
journal
December 2000
Determination of the molecular weight of proteins in solution from a single small-angle X-ray scattering measurement on a relative scale
journal
December 2009
Restoring Low Resolution Structure of Biological Macromolecules from Solution Scattering Using Simulated Annealing
journal
June 1999
A cis -Acting Replication Element in the Sequence Encoding the NS5B RNA-Dependent RNA Polymerase Is Required for Hepatitis C Virus RNA Replication
journal
February 2004
A long-range RNA-RNA interaction between the 5' and 3' ends of the HCV genome
journal
July 2009
An unexpected RNA distal interaction mode found in an essential region of the hepatitis C virus genome
journal
February 2018
Genetic Organization and Diversity of the 3′ Noncoding Region of the Hepatitis C Virus Genome
journal
September 1996
End-to-end crosstalk within the hepatitis C virus genome mediates the conformational switch of the 3′X-tail region
journal
September 2013
SimRNAweb: a web server for RNA 3D structure modeling with optional restraints
journal
April 2016