Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Identification of a novel deFADding activity in human, yeast and bacterial 5; to 3; exoribonucleases

Journal Article · · Nucleic Acids Res.
DOI:https://doi.org/10.1093/nar/gkac617· OSTI ID:1900858
Research Organization:
Advanced Photon Source (APS), Argonne National Laboratory (ANL), Argonne, IL (US)
Sponsoring Organization:
DOE - Office Of Science; NIGMS
OSTI ID:
1900858
Journal Information:
Nucleic Acids Res., Journal Name: Nucleic Acids Res. Journal Issue: (15) Vol. 50
Country of Publication:
United States
Language:
ENGLISH

References (33)

Xrn1 is a deNADding enzyme modulating mitochondrial NAD-capped RNA journal February 2022
DXO/Rai1 enzymes remove 5′-end FAD and dephospho-CoA caps on RNAs journal May 2020
Roquin Promotes Constitutive mRNA Decay via a Conserved Class of Stem-Loop Recognition Motifs journal May 2013
Structure and function of the 5′→3′ exoribonuclease Rat1 and its activating partner Rai1 journal February 2009
Structural and mechanistic basis of mammalian Nudt12 RNA deNADding journal May 2019
Quantification of riboflavin, flavin mononucleotide, and flavin adenine dinucleotide in mammalian model cells by CE with LED-induced fluorescence detection: CE and CEC journal January 2015
Simple and efficient site-directed mutagenesis using two single-primer reactions in parallel to generate mutants for protein structure-function studies journal January 2009
NAD+ Metabolism and the Control of Energy Homeostasis: A Balancing Act between Mitochondria and the Nucleus journal July 2015
Phaser crystallographic software journal July 2007
NAD + -capped RNAs are widespread in the Arabidopsis transcriptome and can probably be translated journal May 2019
The mechanism of RNA 5′ capping with NAD+, NADH and desphospho-CoA journal July 2016
Identification of NAD + capped mRNAs in Saccharomyces cerevisiae journal December 2016
RNase AM, a 5′ to 3′ exonuclease, matures the 5′ end of all three ribosomal RNAs in E. coli journal April 2020
Regulation of chromatin and gene expression by metabolic enzymes and metabolites journal June 2018
Mammalian Nudix proteins cleave nucleotide metabolite caps on RNAs journal May 2020
Metabolic Signaling to Chromatin journal August 2015
Target-Decoy Approach and False Discovery Rate: When Things May Go Wrong journal May 2011
Discovery of a Previously Unrecognized Ribonuclease from Escherichia coli That Hydrolyzes 5′-Phosphorylated Fragments of RNA journal April 2015
Multiple Nudix family proteins possess mRNA decapping activity journal January 2013
Highly accurate protein structure prediction with AlphaFold journal July 2021
PHENIX : building new software for automated crystallographic structure determination journal October 2002
Discovery of m7G-cap in eukaryotic mRNAs journal January 2015
Silver stain for proteins in polyacrylamide gels: A modified procedure with enhanced uniform sensitivity journal November 1981
Quantifying the RNA cap epitranscriptome reveals novel caps in cellular and viral RNA journal September 2019
Coot model-building tools for molecular graphics journal November 2004
NAD tagSeq reveals that NAD + -capped RNAs are mostly produced from a large number of protein-coding genes in Arabidopsis journal May 2019
Changes in mRNA abundance drive shuttling of RNA binding proteins, linking cytoplasmic RNA degradation to transcription journal October 2018
Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA. journal July 1992
Characterization of the XRN1 gene encoding a 5'→3' exoribonuclease: sequence data and analysis of disparate protein and mRNA levels of gene-disrupted yeast cells journal October 1992
5′ End Nicotinamide Adenine Dinucleotide Cap in Human Cells Promotes RNA Decay through DXO-Mediated deNADding journal March 2017
NAD captureSeq indicates NAD as a bacterial cap for a subset of regulatory RNAs journal December 2014
Prospecting for Unannotated Enzymes: Discovery of a 3′,5′-Nucleotide Bisphosphate Phosphatase within the Amidohydrolase Superfamily journal January 2014
TANDEM: matching proteins with tandem mass spectra journal February 2004

Similar Records

Identification of a novel deFADding activity in human, yeast and bacterial 5′ to 3′ exoribonucleases
Journal Article · 2022 · Nucleic Acids Research · OSTI ID:1879163

Structural and Biochemical Studies of the 5 - gt 3 Exoribonuclease Xrn1
Journal Article · 2011 · Nature Structural and Molecular Biology · OSTI ID:1041964

Structure and Function of the 5'-<' Exoribonuclease Rat1 and its Activating Partner Rai1
Journal Article · 2008 · Nature · OSTI ID:980543

Related Subjects