The enzyme pseudooxynicotine amine oxidase from Pseudomonas putida S16 is not an oxidase, but a dehy

Choudhary, Vishakha; Wu, Kevin; Zhang, Zhiyao; Dulchavsky, Mark; Barkman, Todd; Bardwell, James C.A.; Stull, Frederick

doi:10.1016/j.jbc.2022.102251

The enzyme pseudooxynicotine amine oxidase from Pseudomonas putida S16 is not an oxidase, but a dehy

Journal Article · 01 August 2022 · J. Biol. Chem.

DOI:https://doi.org/10.1016/j.jbc.2022.102251· OSTI ID:1900819

Choudhary, Vishakha; Wu, Kevin; Zhang, Zhiyao; Dulchavsky, Mark; Barkman, Todd; Bardwell, James C.A.; Stull, Frederick

Research Organization:: Advanced Photon Source (APS), Argonne National Laboratory (ANL), Argonne, IL (US)

Sponsoring Organization:: DOE - Office Of Science; NIGMS

DOE Contract Number:: NONE;

OSTI ID:: 1900819

Journal Information:: J. Biol. Chem., Journal Name: J. Biol. Chem. Journal Issue: (8) Vol. 298

Country of Publication:: United States

Language:: ENGLISH

References (29)

Fluorescence Properties of Flavin Semiquinone Radicals in Nitronate Monooxygenase Su, Dan; Kabir, Mohammad Pabel; Orozco‐Gonzalez, Yoelvis ChemBioChem, Vol. 20, Issue 13 https://doi.org/10.1002/cbic.201900016	journal	May 2019
A deliberate approach to screening for initial crystallization conditions of biological macromolecules Luft, Joseph R.; Collins, Robert J.; Fehrman, Nancy A. Journal of Structural Biology, Vol. 142, Issue 1 https://doi.org/10.1016/S1047-8477(03)00048-0	journal	April 2003
Oxidation of amines by flavoproteins Fitzpatrick, Paul F. Archives of Biochemistry and Biophysics, Vol. 493, Issue 1 https://doi.org/10.1016/j.abb.2009.07.019	journal	January 2010
A lysine conserved in the monoamine oxidase family is involved in oxidation of the reduced flavin in mouse polyamine oxidase Henderson Pozzi, Michelle; Fitzpatrick, Paul F. Archives of Biochemistry and Biophysics, Vol. 498, Issue 2 https://doi.org/10.1016/j.abb.2010.04.015	journal	June 2010
Electrode potentials of partially reduced oxygen species, from dioxygen to water Koppenol, Willem H.; Stanbury, David M.; Bounds, Patricia L. Free Radical Biology and Medicine, Vol. 49, Issue 3 https://doi.org/10.1016/j.freeradbiomed.2010.04.011	journal	August 2010
Crystal Structure Analysis of Free and Substrate-Bound 6-Hydroxy-l-Nicotine Oxidase from Arthrobacter nicotinovorans Kachalova, Galina S.; Bourenkov, Gleb P.; Mengesdorf, Thorsten Journal of Molecular Biology, Vol. 396, Issue 3 https://doi.org/10.1016/j.jmb.2009.12.009	journal	February 2010
To be or not to be an oxidase: challenging the oxygen reactivity of flavoenzymes Mattevi, Andrea Trends in Biochemical Sciences, Vol. 31, Issue 5 https://doi.org/10.1016/j.tibs.2006.03.003	journal	May 2006
The enigmatic reaction of flavins with oxygen Chaiyen, Pimchai; Fraaije, Marco W.; Mattevi, Andrea Trends in Biochemical Sciences, Vol. 37, Issue 9 https://doi.org/10.1016/j.tibs.2012.06.005	journal	September 2012
Fast Kinetics Reveals Rate-Limiting Oxidation and the Role of the Aromatic Cage in the Mechanism of the Nicotine-Degrading Enzyme NicA2 Tararina, Margarita A.; Dam, Katie K.; Dhingra, Manaswni Biochemistry, Vol. 60, Issue 4 https://doi.org/10.1021/acs.biochem.0c00855	journal	January 2021
Mechanism of the Flavoprotein l -Hydroxynicotine Oxidase: Kinetic Mechanism, Substrate Specificity, Reaction Product, and Roles of Active-Site Residues Fitzpatrick, Paul F.; Chadegani, Fatemeh; Zhang, Shengnan Biochemistry, Vol. 55, Issue 4 https://doi.org/10.1021/acs.biochem.5b01325	journal	January 2016
Structural Analysis Provides Mechanistic Insight into Nicotine Oxidoreductase from Pseudomonas putida Tararina, Margarita A.; Janda, Kim D.; Allen, Karen N. Biochemistry, Vol. 55, Issue 48 https://doi.org/10.1021/acs.biochem.6b00963	journal	November 2016
Mechanism of Flavoprotein l -6-Hydroxynicotine Oxidase: pH and Solvent Isotope Effects and Identification of Key Active Site Residues Fitzpatrick, Paul F.; Chadegani, Fatemeh; Zhang, Shengnan Biochemistry, Vol. 56, Issue 6 https://doi.org/10.1021/acs.biochem.6b01160	journal	January 2017
Crystallography Coupled with Kinetic Analysis Provides Mechanistic Underpinnings of a Nicotine-Degrading Enzyme Tararina, Margarita A.; Xue, Song; Smith, Lauren C. Biochemistry, Vol. 57, Issue 26 https://doi.org/10.1021/acs.biochem.8b00384	journal	May 2018
Proton-Coupled Electron Flow in Protein Redox Machines Dempsey, Jillian L.; Winkler, Jay R.; Gray, Harry B. Chemical Reviews, Vol. 110, Issue 12 https://doi.org/10.1021/cr100182b	journal	December 2010
Integrating macromolecular X-ray diffraction data with the graphical user interface iMosflm Powell, Harold R.; Battye, T. Geoff G.; Kontogiannis, Luke Nature Protocols, Vol. 12, Issue 7 https://doi.org/10.1038/nprot.2017.037	journal	June 2017
A cytochrome c is the natural electron acceptor for nicotine oxidoreductase Dulchavsky, Mark; Clark, Christopher T.; Bardwell, James C. A. Nature Chemical Biology, Vol. 17, Issue 3 https://doi.org/10.1038/s41589-020-00712-3	journal	January 2021
Genomic analysis of Pseudomonas putida: genes in a genome island are crucial for nicotine degradation Tang, Hongzhi; Yao, Yuxiang; Wang, Lijuan Scientific Reports, Vol. 2, Issue 1 https://doi.org/10.1038/srep00377	journal	April 2012
Characterization of Pseudooxynicotine Amine Oxidase of Pseudomonas putida S16 that Is Crucial for Nicotine Degradation Hu, Haiyang; Wang, Weiwei; Tang, Hongzhi Scientific Reports, Vol. 5, Issue 1 https://doi.org/10.1038/srep17770	journal	December 2015
αArg-237 in Methylophilus methylotrophus (sp. W ₃ A ₁ ) Electron-transferring Flavoprotein Affords ∼200-Millivolt Stabilization of the FAD Anionic Semiquinone and a Kinetic Block on Full Reduction to the Dihydroquinone Talfournier, François; Munro, Andrew W.; Basran, Jaswir Journal of Biological Chemistry, Vol. 276, Issue 23 https://doi.org/10.1074/jbc.M010853200	journal	April 2001
ZDOCK server: interactive docking prediction of protein-protein complexes and symmetric multimers Pierce, B. G.; Wiehe, K.; Hwang, H. Bioinformatics, Vol. 30, Issue 12 https://doi.org/10.1093/bioinformatics/btu097	journal	February 2014
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability Katoh, K.; Standley, D. M. Molecular Biology and Evolution, Vol. 30, Issue 4 https://doi.org/10.1093/molbev/mst010	journal	January 2013
Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference Shimodaira, H.; Hasegawa, M. Molecular Biology and Evolution, Vol. 16, Issue 8 https://doi.org/10.1093/oxfordjournals.molbev.a026201	journal	August 1999
Coot model-building tools for molecular graphics Emsley, Paul; Cowtan, Kevin Acta Crystallographica Section D Biological Crystallography, Vol. 60, Issue 12, p. 2126-2132 https://doi.org/10.1107/S0907444904019158	journal	November 2004
Solving structures of protein complexes by molecular replacement with Phaser McCoy, Airlie J. Acta Crystallographica Section D Biological Crystallography, Vol. 63, Issue 1 https://doi.org/10.1107/S0907444906045975	journal	December 2006
Overview of the CCP 4 suite and current developments Winn, Martyn D.; Ballard, Charles C.; Cowtan, Kevin D. Acta Crystallographica Section D Biological Crystallography, Vol. 67, Issue 4 https://doi.org/10.1107/S0907444910045749	journal	March 2011
Towards automated crystallographic structure refinement with phenix.refine Afonine, Pavel V.; Grosse-Kunstleve, Ralf W.; Echols, Nathaniel Acta Crystallographica Section D Biological Crystallography, Vol. 68, Issue 4 https://doi.org/10.1107/S0907444912001308	journal	March 2012
Purification and Properties of l-6-Hydroxynicotine Oxidase Dang Dai, Vo; Decker, K.; Sund, H. European Journal of Biochemistry, Vol. 4, Issue 1 https://doi.org/10.1111/j.1432-1033.1968.tb00177.x	journal	March 1968
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments Price, Morgan N.; Dehal, Paramvir S.; Arkin, Adam P. PLoS ONE, Vol. 5, Issue 3 https://doi.org/10.1371/journal.pone.0009490	journal	March 2010
Structures and mechanism of the monoamine oxidase family Gaweska, Helena; Fitzpatrick, Paul F. BioMolecular Concepts, Vol. 2, Issue 5 https://doi.org/10.1515/BMC.2011.030	journal	October 2011

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