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Visualizing ?Alternative Isoinformational Engineered? DNA in A- and B-Forms at High Resolution

Journal Article · · J. Am. Chem. Soc.
DOI:https://doi.org/10.1021/jacs.2c05255· OSTI ID:1900818
Research Organization:
Advanced Photon Source (APS), Argonne National Laboratory (ANL), Argonne, IL (US)
Sponsoring Organization:
DOE - Office Of Science; NSF
OSTI ID:
1900818
Journal Information:
J. Am. Chem. Soc., Journal Name: J. Am. Chem. Soc. Journal Issue: (34) Vol. 144
Country of Publication:
United States
Language:
ENGLISH

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