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Rapid and accurate calculation of small-angle scattering profiles using the golden ratio
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July 2013 |
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Protein folding and misfolding
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December 2003 |
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Calculations and Publication-Quality Illustrations for Analytical Ultracentrifugation Data
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January 2015 |
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P-LINCS: A Parallel Linear Constraint Solver for Molecular Simulation
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December 2007 |
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A zinc-dependent adhesion module is responsible for intercellular adhesion in staphylococcal biofilms
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December 2008 |
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Role for the A Domain of Unprocessed Accumulation-Associated Protein (Aap) in the Attachment Phase of the Staphylococcus epidermidis Biofilm Phenotype
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December 2014 |
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Amyloid fibers provide structural integrity to Bacillus subtilis biofilms
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January 2010 |
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Comparison of multiple Amber force fields and development of improved protein backbone parameters
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November 2006 |
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Staphylococcus epidermidis — the 'accidental' pathogen
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August 2009 |
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Improved side-chain torsion potentials for the Amber ff99SB protein force field
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January 2010 |
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Accurate SAXS Profile Computation and its Assessment by Contrast Variation Experiments
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August 2013 |
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Viscous fingering in chromatography visualized via magnetic resonance imaging
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July 1994 |
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SASSIE: A program to study intrinsically disordered biological molecules and macromolecular ensembles using experimental scattering restraints
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February 2012 |
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Small-angle scattering studies of biological macromolecules in solution
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September 2003 |
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Bacterial surface properties of clinically isolatedStaphylococcus epidermidis strains determine adhesion on polyethylene
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December 1998 |
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Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms
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December 2012 |
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The expanding amyloid family: Structure, stability, function, and pathogenesis
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September 2021 |
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Weak Interactions Govern the Viscosity of Concentrated Antibody Solutions: High-Throughput Analysis Using the Diffusion Interaction Parameter
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July 2012 |
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The Proline/Glycine-Rich Region of the Biofilm Adhesion Protein Aap Forms an Extended Stalk that Resists Compaction
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January 2017 |
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Validating Solution Ensembles from Molecular Dynamics Simulation by Wide-Angle X-ray Scattering Data
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July 2014 |
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Atomic structures of amyloid cross-β spines reveal varied steric zippers
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April 2007 |
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Surface Proteins of Staphylococcus epidermidis
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July 2020 |
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Induction of Staphylococcus epidermidis biofilm formation via proteolytic processing of the accumulation-associated protein by staphylococcal and host proteases: Aap mediated S. epidermidis biofilm formation
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January 2005 |
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The Amyloid State of Proteins in Human Diseases
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March 2012 |
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WAXSiS: a web server for the calculation of SAXS/WAXS curves based on explicit-solvent molecular dynamics
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April 2015 |
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Small-angle scattering: a view on the properties, structures and structural changes of biological macromolecules in solution
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May 2003 |
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Viscous fingering in packed chromatographic columns: Linear stability analysis
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May 2007 |
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Polysaccharide intercellular adhesin or protein factors in biofilm accumulation of Staphylococcus epidermidis and Staphylococcus aureus isolated from prosthetic hip and knee joint infections
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March 2007 |
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Molecular dynamics with coupling to an external bath
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October 1984 |
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Glycan-Dependent Corneocyte Adherence of Staphylococcus epidermidis Mediated by the Lectin Subdomain of Aap
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August 2021 |
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GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
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September 2015 |
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Interpretation of Solution X-Ray Scattering by Explicit-Solvent Molecular Dynamics
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May 2015 |
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ATSAS 3.0 : expanded functionality and new tools for small-angle scattering data analysis
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February 2021 |
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Amyloid assembly and disassembly
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April 2018 |
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Size-Distribution Analysis of Macromolecules by Sedimentation Velocity Ultracentrifugation and Lamm Equation Modeling
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March 2000 |
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Functional consequences of B-repeat sequence variation in the staphylococcal biofilm protein Aap: deciphering the assembly code
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January 2017 |
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CRYSOL – a Program to Evaluate X-ray Solution Scattering of Biological Macromolecules from Atomic Coordinates
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The metalloprotease SepA governs processing of accumulation-associated protein and shapes intercellular adhesive surface properties in S taphylococcus epidermidis: Metalloprotease SepA
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January 2017 |
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Defining the metal specificity of a multifunctional biofilm adhesion protein: Metal Specificity of Aap Assembly
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July 2017 |
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Structural Characterization of Flexible Proteins Using Small-Angle X-ray Scattering
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May 2007 |
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Advanced ensemble modelling of flexible macromolecules using X-ray solution scattering
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February 2015 |
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PRIMUS: a Windows PC-based system for small-angle scattering data analysis
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September 2003 |
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Protein Misfolding, Amyloid Formation, and Human Disease: A Summary of Progress Over the Last Decade
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June 2017 |
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BioXTAS RAW , a software program for high-throughput automated small-angle X-ray scattering data reduction and preliminary analysis
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Settle: An analytical version of the SHAKE and RATTLE algorithm for rigid water models
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Protein hydration in solution: Experimental observation by x-ray and neutron scattering
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March 1998 |
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The staphylococcal biofilm protein Aap forms a tetrameric species as a necessary intermediate before amyloidogenesis
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September 2020 |
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The biofilm adhesion protein Aap from Staphylococcus epidermidis forms zinc-dependent amyloid fibers
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April 2020 |
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Analysis of nonideality: insights from high concentration simulations of sedimentation velocity data
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November 2020 |
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Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein
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June 2015 |
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Improved methods for fitting sedimentation coefficient distributions derived by time-derivative techniques
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July 2006 |
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BioXTAS RAW : improvements to a free open-source program for small-angle X-ray scattering data reduction and analysis
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September 2017 |
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Improved radiation dose efficiency in solution SAXS using a sheath flow sample environment
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November 2016 |
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Using circular dichroism collected as a function of temperature to determine the thermodynamics of protein unfolding and binding interactions
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December 2006 |
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A practical guide to small angle X-ray scattering (SAXS) of flexible and intrinsically disordered proteins
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August 2015 |
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Role of Escherichia coli Curli Operons in Directing Amyloid Fiber Formation
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February 2002 |
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Arrangement of subunits and ordering of β-strands in an amyloid sheet
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September 2002 |
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Accumulation-Associated Protein Enhances Staphylococcus epidermidis Biofilm Formation under Dynamic Conditions and Is Required for Infection in a Rat Catheter Model
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October 2014 |
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Particle mesh Ewald: An N ⋅log( N ) method for Ewald sums in large systems
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June 1993 |
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2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update
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August 2017 |
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Canonical sampling through velocity rescaling
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Methodological aspects of gel filtration with special reference to desalting operations
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HullRad: Fast Calculations of Folded and Disordered Protein and Nucleic Acid Hydrodynamic Properties
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February 2018 |
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The role of Staphylococcus aureus surface protein SasG in adherence and biofilm formation
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August 2007 |
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Proximity energies: a framework for understanding concentrated solutions: PROXIMITY ENERGIES
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February 2012 |
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Amyloid Structures as Biofilm Matrix Scaffolds
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May 2016 |
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Comparison of simple potential functions for simulating liquid water
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July 1983 |
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Effect of interdomain dynamics on the structure determination of modular proteins by small-angle scattering
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Boundary analysis in sedimentation transport experiments: A procedure for obtaining sedimentation coefficient distributions using the time derivative of the concentration profile
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Diversity, biogenesis and function of microbial amyloids
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February 2012 |
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Interpreting solution X-ray scattering data using molecular simulations
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April 2018 |
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A Consensus Method for the Prediction of ‘Aggregation-Prone’ Peptides in Globular Proteins
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January 2013 |
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Role of Intermolecular Forces in Defining Material Properties of Protein Nanofibrils
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December 2007 |
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The Terminal A Domain of the Fibrillar Accumulation-Associated Protein (Aap) of Staphylococcus epidermidis Mediates Adhesion to Human Corneocytes
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November 2009 |