Structural and catalytic analyses of the InsP[subscript 6] kinase activities of higher plant ITPKs

Zong, Guangning; Shears, Stephen B.; Wang, Huanchen

doi:10.1096/fj.202200393R

Structural and catalytic analyses of the InsP[subscript 6] kinase activities of higher plant ITPKs

Journal Article · 01 July 2022 · FASEB J.

DOI:https://doi.org/10.1096/fj.202200393R· OSTI ID:1877205

Zong, Guangning; Shears, Stephen B.; Wang, Huanchen

Research Organization:: Advanced Photon Source (APS), Argonne National Laboratory (ANL), Argonne, IL (US)

Sponsoring Organization:: DOE - Office Of Science; NIH

OSTI ID:: 1877205

Journal Information:: FASEB J., Journal Name: FASEB J. Journal Issue: (7) Vol. 36

Country of Publication:: United States

Language:: ENGLISH

References (42)

The pathway of myo-inositol 1,3,4-trisphosphate phosphorylation in liver Shears, S. B. Journal of Biological Chemistry, Vol. 264, Issue 33 https://doi.org/10.1016/S0021-9258(19)47192-5	journal	November 1989
A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays Zhang, J. -H. Journal of Biomolecular Screening, Vol. 4, Issue 2 https://doi.org/10.1177/108705719900400206	journal	April 1999
Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding Wang, Huanchen; Falck, J. R.; Hall, Traci M. Tanaka Nature Chemical Biology, Vol. 8, Issue 1 https://doi.org/10.1038/nchembio.733	journal	November 2011
The regulation of the phosphorylation of inositol 1,3,4-trisphosphate in cell-free preparations and its relevance to the formation of inositol 1,3,4,6-tetrakisphosphate in agonist-stimulated rat parotid acinar cells Hughes, P. J.; Hughes, A. R.; Putney, J. W. Journal of Biological Chemistry, Vol. 264, Issue 33 https://doi.org/10.1016/S0021-9258(19)47191-3	journal	November 1989
Arabidopsis thaliana inositol 1,3,4-trisphosphate 5/6-kinase 4 (AtITPK4) is an outlier to a family of ATP-grasp fold proteins from Arabidopsis Sweetman, Dylan; Stavridou, Ioanna; Johnson, Sue FEBS Letters, Vol. 581, Issue 22 https://doi.org/10.1016/j.febslet.2007.07.046	journal	July 2007
Can Inositol Pyrophosphates Inform Strategies for Developing Low Phytate Crops? Freed, Catherine; Adepoju, Olusegun; Gillaspy, Glenda Plants, Vol. 9, Issue 1 https://doi.org/10.3390/plants9010115	journal	January 2020
Specificity Determinants in Inositol Polyphosphate Synthesis: Crystal Structure of Inositol 1,3,4-Trisphosphate 5/6-Kinase Miller, Gregory J.; Wilson, Monita P.; Majerus, Philip W. Molecular Cell, Vol. 18, Issue 2 https://doi.org/10.1016/j.molcel.2005.03.016	journal	April 2005
Phosphorylation of Proteins by Inositol Pyrophosphates Saiardi, Adolfo; Bhandari, Rashna; Resnick, Adam C. Science, Vol. 306, Issue 5704 https://doi.org/10.1126/science.1103344	journal	December 2004
New structural insights reveal an expanded reaction cycle for inositol pyrophosphate hydrolysis by human DIPP1 Zong, Guangning; Jork, Nikolaus; Hostachy, Sarah The FASEB Journal, Vol. 35, Issue 2 https://doi.org/10.1096/fj.202001489R	journal	January 2021
Arabidopsis inositol polyphosphate kinases IPK1 and ITPK1 modulate crosstalk between SA-dependent immunity and phosphate-starvation responses Gulabani, Hitika; Goswami, Krishnendu; Walia, Yashika Plant Cell Reports, Vol. 41, Issue 2 https://doi.org/10.1007/s00299-021-02812-3	journal	November 2021
Control of XPR1-dependent cellular phosphate efflux by InsP ₈ is an exemplar for functionally-exclusive inositol pyrophosphate signaling Li, Xingyao; Gu, Chunfang; Hostachy, Sarah Proceedings of the National Academy of Sciences, Vol. 117, Issue 7 https://doi.org/10.1073/pnas.1908830117	journal	February 2020
A microtiter plate assay for inorganic phosphate Hoenig, Margarethe; Lee, R. John; Ferguson, Duncan C. Journal of Biochemical and Biophysical Methods, Vol. 19, Issue 2-3 https://doi.org/10.1016/0165-022X(89)90031-6	journal	August 1989
Inositol Hexakisphosphate Kinase Products Contain Diphosphate and Triphosphate Groups Draškovič, Petra; Saiardi, Adolfo; Bhandari, Rashna Chemistry & Biology, Vol. 15, Issue 3 https://doi.org/10.1016/j.chembiol.2008.01.011	journal	March 2008
Inositol phosphate kinases in the eukaryote landscape Laha, Debabrata; Portela-Torres, Paloma; Desfougères, Yann Advances in Biological Regulation, Vol. 79 https://doi.org/10.1016/j.jbior.2020.100782	journal	January 2021
Oscillatory Chloride Efflux at the Pollen Tube Apex Has a Role in Growth and Cell Volume Regulation and Is Targeted by Inositol 3,4,5,6-Tetra kis phosphate Zonia, Laura; Cordeiro, Sofia; Tupý, Jaroslav The Plant Cell, Vol. 14, Issue 9 https://doi.org/10.1105/tpc.003830	journal	September 2002
IP6K structure and the molecular determinants of catalytic specificity in an inositol phosphate kinase family Wang, Huanchen; DeRose, Eugene F.; London, Robert E. Nature Communications, Vol. 5, Issue 1 https://doi.org/10.1038/ncomms5178	journal	June 2014
The Inositol Hexakisphosphate Kinase Family: CATALYTIC FLEXIBILITY AND FUNCTION IN YEAST VACUOLE BIOGENESIS Saiardi, Adolfo; Caffrey, James J.; Snyder, Solomon H. Journal of Biological Chemistry, Vol. 275, Issue 32 https://doi.org/10.1074/jbc.M002750200	journal	May 2000
Inositol Pyrophosphate InsP8 Acts as an Intracellular Phosphate Signal in Arabidopsis Dong, Jinsong; Ma, Guojie; Sui, Liqian Molecular Plant, Vol. 12, Issue 11 https://doi.org/10.1016/j.molp.2019.08.002	journal	November 2019
ITPK1 mediates the lipid-independent synthesis of inositol phosphates controlled by metabolism Desfougères, Yann; Wilson, Miranda S. C.; Laha, Debabrata Proceedings of the National Academy of Sciences, Vol. 116, Issue 49 https://doi.org/10.1073/pnas.1911431116	journal	November 2019
Mutation of Inositol 1,3,4-trisphosphate 5/6-kinase6 Impairs Plant Growth and Phytic Acid Synthesis in Rice Jiang, Meng; Liu, Yang; Liu, Yanhua Plants, Vol. 8, Issue 5 https://doi.org/10.3390/plants8050114	journal	April 2019
Arabidopsis ITPK1 and ITPK2 Have an Evolutionarily Conserved Phytic Acid Kinase Activity Laha, Debabrata; Parvin, Nargis; Hofer, Alexandre ACS Chemical Biology, Vol. 14, Issue 10 https://doi.org/10.1021/acschembio.9b00423	journal	September 2019
Multitasking in signal transduction by a promiscuous human Ins(3,4,5,6)P4 1-kinase/Ins(1,3,4)P3 5/6-kinase Yang, Xiaonian; Shears, Stephen B. Biochemical Journal, Vol. 351, Issue 3 https://doi.org/10.1042/bj3510551	journal	October 2000
An ATP-responsive metabolic cassette comprised of inositol tris/tetrakisphosphate kinase 1 (ITPK1) and inositol pentakisphosphate 2-kinase (IPK1) buffers diphosphosphoinositol phosphate levels Whitfield, Hayley; White, Gaye; Sprigg, Colleen Biochemical Journal, Vol. 477, Issue 14 https://doi.org/10.1042/BCJ20200423	journal	July 2020
Analysis of Dictyostelium discoideum Inositol Pyrophosphate Metabolism by Gel Electrophoresis Pisani, Francesca; Livermore, Thomas; Rose, Giuseppina PLoS ONE, Vol. 9, Issue 1 https://doi.org/10.1371/journal.pone.0085533	journal	January 2014
A high energy phosphate jump - From pyrophospho-inositol to pyrophospho-serine Ganguli, Shubhra; Shah, Akruti; Hamid, Aisha Advances in Biological Regulation, Vol. 75 https://doi.org/10.1016/j.jbior.2019.100662	journal	January 2020
Inositol phosphate kinases: Expanding the biological significance of the universal core of the protein kinase fold Shears, Stephen B.; Wang, Huanchen Advances in Biological Regulation, Vol. 71 https://doi.org/10.1016/j.jbior.2018.10.006	journal	January 2019
Long-term uncoupling of chloride secretion from intracellular calcium levels by lns(3,4,5,6)P4 Vajanaphanich, Mana; Schultz, Carsten; Rudolf, Marco T. Nature, Vol. 371, Issue 6499 https://doi.org/10.1038/371711a0	journal	October 1994
Back in the water: the return of the inositol phosphates Irvine, Robin F.; Schell, Michael J. Nature Reviews Molecular Cell Biology, Vol. 2, Issue 5 https://doi.org/10.1038/35073015	journal	May 2001
Functional Regulation of ClC-3 in the Migration of Vascular Smooth Muscle Cells Ganapathi, Sindura B.; Wei, Shun-Guang; Zaremba, Angelika Hypertension, Vol. 61, Issue 1 https://doi.org/10.1161/HYPERTENSIONAHA.112.194209	journal	January 2013
Arabidopsis inositol phosphate kinases IPK1 and ITPK1 constitute a metabolic pathway in maintaining phosphate homeostasis Kuo, Hui-Fen; Hsu, Yu-Ying; Lin, Wei-Chi The Plant Journal, Vol. 95, Issue 4 https://doi.org/10.1111/tpj.13974	journal	June 2018
ITPK1 is an InsP6/ADP phosphotransferase that controls phosphate signaling in Arabidopsis Riemer, Esther; Qiu, Danye; Laha, Debabrata Molecular Plant, Vol. 14, Issue 11 https://doi.org/10.1016/j.molp.2021.07.011	journal	November 2021
Characterization of a multifunctional inositol phosphate kinase from rice and barley belonging to the ATP-grasp superfamily Josefsen, Lone; Bohn, Lisbeth; Sørensen, Mikael Blom Gene, Vol. 397, Issue 1-2 https://doi.org/10.1016/j.gene.2007.04.018	journal	August 2007
On the contribution of stereochemistry to human ITPK1 specificity: Ins(1,4,5,6)P ₄ is not a physiologic substrate Riley, Andrew M.; Deleu, Sandrine; Qian, Xun FEBS Letters, Vol. 580, Issue 1 https://doi.org/10.1016/j.febslet.2005.12.016	journal	December 2005
Metabolism of inositol 1,3,4-trisphosphate to a new tetrakisphosphate isomer in angiotensin-stimulated adrenal glomerulosa cells. Balla, T.; Guillemette, G.; Baukal, A. J. Journal of Biological Chemistry, Vol. 262, Issue 21 https://doi.org/10.1016/S0021-9258(18)61058-0	journal	July 1987
Wheat inositol pyrophosphate kinase TaVIH2-3B modulates cell-wall composition and drought tolerance in Arabidopsis Shukla, Anuj; Kaur, Mandeep; Kanwar, Swati BMC Biology, Vol. 19, Issue 1 https://doi.org/10.1186/s12915-021-01198-8	journal	December 2021
The versatility of inositol phosphates as cellular signals Shears, Stephen B. Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids, Vol. 1436, Issue 1-2 https://doi.org/10.1016/S0005-2760(98)00131-3	journal	December 1998
Metabolic and signaling properties of an Itpk gene family in Glycine max Stiles, Amanda R.; Qian, Xun; Shears, Stephen B. FEBS Letters, Vol. 582, Issue 13 https://doi.org/10.1016/j.febslet.2008.04.054	journal	May 2008
Integration of Inositol Phosphate Signaling Pathways via Human ITPK1 Chamberlain, Philip P.; Qian, Xun; Stiles, Amanda R. Journal of Biological Chemistry, Vol. 282, Issue 38 https://doi.org/10.1074/jbc.M703121200	journal	September 2007
A novel context for the `MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase Safrany, S. T. The EMBO Journal, Vol. 17, Issue 22 https://doi.org/10.1093/emboj/17.22.6599	journal	November 1998
Regulation of Ins(3,4,5,6)P4 Signaling by a Reversible Kinase/Phosphatase Ho, Melisa W. Y.; Yang, Xiaonian; Carew, Mark A. Current Biology, Vol. 12, Issue 6 https://doi.org/10.1016/S0960-9822(02)00713-3	journal	March 2002
Exploring the role of Inositol 1,3,4-trisphosphate 5/6 kinase-2 ( GmITPK2 ) as a dehydration and salinity stress regulator in Glycine max (L.) Merr. through heterologous expression in E. coli Marathe, Ashish; Krishnan, Veda; Vinutha, T. Plant Physiology and Biochemistry, Vol. 123 https://doi.org/10.1016/j.plaphy.2017.12.026	journal	February 2018
VIH2 Regulates the Synthesis of Inositol Pyrophosphate InsP ₈ and Jasmonate-Dependent Defenses in Arabidopsis Laha, Debabrata; Johnen, Philipp; Azevedo, Cristina The Plant Cell, Vol. 27, Issue 4 https://doi.org/10.1105/tpc.114.135160	journal	April 2015

Similar Records

Apo and InsP[subscript 3]-bound crystal structures of the ligand-binding domain of an InsP[subscript 3] receptor

Journal Article · 2012 · Nature Structural and Molecular Biology · OSTI ID:1039062

First synthetic analogues of diphosphoinositol polyphosphates: interaction with PP-InsP[subscript 5] kinase

Journal Article · 2013 · Chem. Commun. · OSTI ID:1076611

Structural and functional conservation of key domains in InsP[subscript 3] and ryanodine receptors

Journal Article · 2012 · Nature · OSTI ID:1037918

Structural and catalytic analyses of the InsP[subscript 6] kinase activities of higher plant ITPKs

Citation Formats

References (42)

Similar Records

Related Subjects