Skip to main content
U.S. Department of Energy
Office of Scientific and Technical Information

Epoxyqueuosine Reductase QueH in the Biosynthetic Pathway to tRNA Queuosine Is a Unique Metalloenzym

Journal Article · · Biochemistry-US

Research Organization:
Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Organization:
DOE - Office Of Science; National Institutes of Health (NIH)
OSTI ID:
1829882
Journal Information:
Biochemistry-US, Vol. 60, Issue (42)
Country of Publication:
United States
Language:
ENGLISH

References (64)

Biosynthesis and Function of Posttranscriptional Modifications of Transfer RNAs journal December 2012
Functions of Bacterial tRNA Modifications: From Ubiquity to Diversity journal January 2021
MODOMICS: a database of RNA modification pathways. 2017 update journal November 2017
tRNA Modifications: Impact on Structure and Thermal Adaptation journal April 2017
tRNA Stabilization by Modified Nucleotides journal May 2010
Transfer RNA modification and infection – Implications for pathogenicity and host responses journal April 2018
Rapid tRNA Decay Can Result from Lack of Nonessential Modifications journal January 2006
Amber Suppression: a Nucleotide Change in the Anticodon of a Tyrosine Transfer RNA journal March 1968
Structure of the modified nucleoside Q isolated from Escherichia coli transfer ribonucleic acid. 7-(4,5-cis-Dihydroxy-1-cyclopenten-3-ylaminomethyl)-7-deazaguanosine journal September 1975
Possible anticodon sequences of tRNAHis, tRNAAsn, and tRNAAsp from Escherichia coli. Universal presence of nucleoside O in the first position of the anticodons of these transfer ribonucleic acid journal January 1972
Queuine, a modified base incorporated posttranscriptionally into eukaryotic transfer RNA: wide distribution in nature journal April 1982
Isolation and characterization of an Escherichia coli mutant lacking tRNA-guanine transglycosylase. Function and biosynthesis of queuosine in tRNA. journal June 1982
Effects of tRNA modification on translational accuracy depend on intrinsic codon–anticodon strength journal December 2015
Queuosine‐modified tRNAs confer nutritional control of protein translation journal August 2018
Queuine links translational control in eukaryotes to a micronutrient from bacteria journal February 2019
Deazaguanine derivatives, examples of crosstalk between RNA and DNA modification pathways journal December 2016
Plant, Animal, and Fungal Micronutrient Queuosine Is Salvaged by Members of the DUF2419 Protein Family journal June 2014
Biosynthesis of pyrrolopyrimidines journal August 2012
Crystal structure of tRNA-guanine transglycosylase: RNA modification by base exchange. journal June 1996
A new function of S-adenosylmethionine: The ribosyl moiety of AdoMet is the precursor of the cyclopentenediol moiety of the tRNA wobble base queuine journal August 1993
Biochemical and Spectroscopic Studies of Epoxyqueuosine Reductase: A Novel Iron–Sulfur Cluster- and Cobalamin-Containing Protein Involved in the Biosynthesis of Queuosine journal July 2015
Identification of a Novel Epoxyqueuosine Reductase Family by Comparative Genomics journal February 2017
The Escherichia coli COG1738 Member YhhQ Is Involved in 7-Cyanodeazaguanine (preQ0) Transport journal February 2017
Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens journal September 2019
Discovery of epoxyqueuosine (oQ) reductase reveals parallels between halorespiration and tRNA modification journal April 2011
Epoxyqueuosine Reductase Structure Suggests a Mechanism for Cobalamin-dependent tRNA Modification journal September 2015
Molecular basis of cobalamin-dependent RNA modification journal September 2016
Genetic Analysis Identifies a Function for the queC ( ybaX ) Gene Product at an Initial Step in the Queuosine Biosynthetic Pathway in Escherichia coli journal October 2005
Identification of a gene involved in the generation of 4-thiouridine in tRNA journal June 1998
A tRNA-independent Mechanism for Transamidosome Assembly Promotes Aminoacyl-tRNA Transamidation journal February 2013
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories journal May 2018
Roll: a new algorithm for the detection of protein pockets and cavities with a rolling probe sphere journal October 2009
CASTp 3.0: computed atlas of surface topography of proteins journal June 2018
PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations journal July 2004
Electrostatics of nanosystems: Application to microtubules and the ribosome journal August 2001
XDS journal January 2010
Substructure search procedures for macromolecular structures journal October 2003
PHENIX : building new software for automated crystallographic structure determination journal October 2002
Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard journal May 2009
Coot model-building tools for molecular graphics journal November 2004
REFMAC 5 for the refinement of macromolecular crystal structures journal March 2011
electronic Ligand Builder and Optimization Workbench ( eLBOW ): a tool for ligand coordinate and restraint generation journal September 2009
MolProbity : all-atom structure validation for macromolecular crystallography journal December 2009
Diversity of Archaeosine Synthesis in Crenarchaeota journal November 2011
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants the Keio collection journal February 2006
Gene expression response to misfolded protein as a screen for soluble recombinant protein journal February 2002
Benchmarking fold detection by DaliLite v.5 journal July 2019
Structure of the non-redox-active tungsten/[4Fe:4S] enzyme acetylene hydratase journal February 2007
Exploring the Active Site of the Tungsten, Iron-Sulfur Enzyme Acetylene Hydratase journal March 2011
Vitamin K epoxide reductase: homology, active site and catalytic mechanism journal June 2004
Recognizing metal and acid radical ion-binding sites by integrating ab initio modeling with template-based transferals journal July 2016
Metal-Binding Sites Are Designed to Achieve Optimal Mechanical and Signaling Properties journal September 2010
Function and biogenesis of iron–sulphur proteins journal August 2009
Ferredoxin, in conjunction with NADPH and ferredoxin-NADP reductase, transfers electrons to the IscS/IscU complex to promote iron–sulfur cluster assembly journal September 2015
A Nutrient-Driven tRNA Modification Alters Translational Fidelity and Genome-wide Protein Coding across an Animal Genus journal December 2014
Chemistry and Enzymology of Vitamin B 12 journal June 2005
The Many Faces of Vitamin B12: Catalysis by Cobalamin-Dependent Enzymes journal June 2003
Uneven distribution of cobamide biosynthesis and dependence in bacteria predicted by comparative genomics journal November 2018
Chemical model studies for the mechanism of vitamin K epoxide reductase journal September 1981
The EFI Web Resource for Genomic Enzymology Tools: Leveraging Protein, Genome, and Metagenome Databases to Discover Novel Enzymes and Metabolic Pathways journal September 2019
Metal ions in biological catalysis: from enzyme databases to general principles journal July 2008
The Interface Between the Biological and Inorganic Worlds: Iron-Sulfur Metalloclusters journal May 2003
Iron-sulfur proteins: ancient structures, still full of surprises journal February 2000
Snapshots of tRNA sulphuration via an adenylated intermediate journal July 2006

Similar Records

Unique pathway of expression of an opal suppressor phosphoserine tRNA
Journal Article · 1987 · Proc. Natl. Acad. Sci. U.S.A.; (United States) · OSTI ID:6999943

Crystallization and preliminary X-ray characterization of the nitrile reductase QueF: a queuosine-biosynthesis enzyme
Journal Article · 2005 · Acta Crystallographica. Section F · OSTI ID:22356211

Structure of the Bacillus anthracis dTDP-L-rhamnose-biosynthetic enzyme dTDP-4-dehydrorhamnose reductase (RfbD)
Journal Article · 2017 · Acta Crystallographica. Section F, Structural Biology Communications · OSTI ID:1498424

Related Subjects