Epistasis as the primary factor in molecular evolution
|
journal
|
October 2012 |
Pervasive Cryptic Epistasis in Molecular Evolution
|
journal
|
October 2010 |
Stability-mediated epistasis constrains the evolution of an influenza protein
|
journal
|
May 2013 |
Adaptation in protein fitness landscapes is facilitated by indirect paths
|
journal
|
July 2016 |
Epistasis and intramolecular networks in protein evolution
|
journal
|
August 2021 |
Epistasis in protein evolution: Epistasis in Protein Evolution
|
journal
|
February 2016 |
Evolution of DNA Specificity in a Transcription Factor Family Produced a New Gene Regulatory Module
|
journal
|
September 2014 |
Experimental interrogation of the path dependence and stochasticity of protein evolution using phage-assisted continuous evolution
|
journal
|
May 2013 |
Pervasive degeneracy and epistasis in a protein-protein interface
|
journal
|
February 2015 |
Reverse evolution leads to genotypic incompatibility despite functional and active site convergence
|
journal
|
August 2015 |
The Biochemical Architecture of an Ancient Adaptive Landscape
|
journal
|
October 2005 |
Using ancient protein kinases to unravel a modern cancer drug's mechanism
|
journal
|
February 2015 |
Alternative evolutionary histories in the sequence space of an ancient protein
|
journal
|
September 2017 |
A Comprehensive Biophysical Description of Pairwise Epistasis throughout an Entire Protein Domain
|
journal
|
November 2014 |
Thermodynamic System Drift in Protein Evolution
|
journal
|
November 2014 |
Hyperstability and Substrate Promiscuity in Laboratory Resurrections of Precambrian β-Lactamases
|
journal
|
February 2013 |
Synergistic effects of functionally distinct substitutions in β-lactamase variants shed light on the evolution of bacterial drug resistance
|
journal
|
October 2018 |
Robustness–epistasis link shapes the fitness landscape of a randomly drifting protein
|
journal
|
November 2006 |
Adaptive protein evolution grants organismal fitness by improving catalysis and flexibility
|
journal
|
December 2008 |
Protein stability promotes evolvability
|
journal
|
March 2006 |
Allostery in Its Many Disguises: From Theory to Applications
|
journal
|
April 2019 |
The ensemble nature of allostery
|
journal
|
April 2014 |
Evolution of Minimal Specificity and Promiscuity in Steroid Hormone Receptors
|
journal
|
November 2012 |
Altering the allosteric pathway in IGPS suppresses millisecond motions and catalytic activity
|
journal
|
April 2017 |
Rewiring the Specificity of Two-Component Signal Transduction Systems
|
journal
|
June 2008 |
Crystal Structures of Multidrug Binding Protein TtgR in Complex with Antibiotics and Plant Antimicrobials
|
journal
|
June 2007 |
Antibiotic-Dependent Induction of Pseudomonas putida DOT-T1E TtgABC Efflux Pump Is Mediated by the Drug Binding Repressor TtgR
|
journal
|
September 2003 |
Domain Cross-talk during Effector Binding to the Multidrug Binding TTGR Regulator
|
journal
|
July 2010 |
Effector-Repressor Interactions, Binding of a Single Effector Molecule to the Operator-bound TtgR Homodimer Mediates Derepression
|
journal
|
March 2006 |
RosettaScripts: A Scripting Language Interface to the Rosetta Macromolecular Modeling Suite
|
journal
|
June 2011 |
Improving key enzyme activity in phenylpropanoid pathway with a designed biosensor
|
journal
|
March 2017 |
Engineering an allosteric transcription factor to respond to new ligands
|
journal
|
December 2015 |
Quantifying epistatic interactions among the components constituting the protein translation system
|
journal
|
January 2009 |
Rosetta3: An Object-Oriented Software Suite for the Simulation and Design of Macromolecules
|
book
|
January 2011 |
A Pareto-Optimal Refinement Method for Protein Design Scaffolds
|
journal
|
April 2013 |
Computational Design of an Enzyme Catalyst for a Stereoselective Bimolecular Diels-Alder Reaction
|
journal
|
July 2010 |
The T7 phage gene 10 leader RNA, a ribosome-binding site that dramatically enhances the expression of foreign genes in Escherichia coli
|
journal
|
December 1988 |
Enzymatic assembly of DNA molecules up to several hundred kilobases
|
journal
|
April 2009 |
Composability of regulatory sequences controlling transcription and translation in Escherichia coli
|
journal
|
August 2013 |
SciPy 1.0: fundamental algorithms for scientific computing in Python
|
journal
|
February 2020 |
The NumPy Array: A Structure for Efficient Numerical Computation
|
journal
|
March 2011 |
XDS
|
journal
|
January 2010 |
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
|
journal
|
October 2019 |
SOLVE and RESOLVE: automated structure solution, density modification and model building
|
journal
|
November 2003 |
Features and development of Coot
|
journal
|
March 2010 |
Towards automated crystallographic structure refinement with phenix.refine
|
journal
|
March 2012 |
MolProbity : all-atom structure validation for macromolecular crystallography
|
journal
|
December 2009 |
Matplotlib: A 2D Graphics Environment
|
journal
|
January 2007 |
POVME 3.0: Software for Mapping Binding Pocket Flexibility
|
journal
|
August 2017 |