Integrating biological pathways and genomic profiles with ChiBE 2
|
journal
|
January 2014 |
ChiBE: interactive visualization and manipulation of BioPAX pathway models
|
journal
|
December 2009 |
The histone demethylase KDM5A is a key factor for the resistance to temozolomide in glioblastoma
|
journal
|
November 2015 |
AML-induced osteogenic differentiation in mesenchymal stromal cells supports leukemia growth
|
journal
|
July 2017 |
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
|
journal
|
September 2006 |
AURKB as a target in non-small cell lung cancer with acquired resistance to anti-EGFR therapy
|
journal
|
April 2019 |
Comparison of imatinib mesylate, dasatinib (BMS-354825), and nilotinib (AMN107) in an N-ethyl-N-nitrosourea (ENU)–based mutagenesis screen: high efficacy of drug combinations
|
journal
|
October 2006 |
Identification of Interleukin-1 by Functional Screening as a Key Mediator of Cellular Expansion and Disease Progression in Acute Myeloid Leukemia
|
journal
|
March 2017 |
Kinase-Substrate Enrichment Analysis Provides Insights into the Heterogeneity of Signaling Pathway Activation in Leukemia Cells
|
journal
|
March 2013 |
Vitamin B6 Addiction in Acute Myeloid Leukemia
|
journal
|
January 2020 |
Gilteritinib: First Global Approval
|
journal
|
February 2019 |
Proteogenomic Characterization of Endometrial Carcinoma
|
journal
|
February 2020 |
Chemotherapy-Resistant Human Acute Myeloid Leukemia Cells Are Not Enriched for Leukemic Stem Cells but Require Oxidative Metabolism
|
journal
|
April 2017 |
Profile of Quizartinib for the Treatment of Adult Patients with Relapsed/Refractory FLT3-ITD-Positive Acute Myeloid Leukemia: Evidence to Date
|
journal
|
January 2020 |
Bone Marrow Mesenchymal Stem Cells Support Acute Myeloid Leukemia Bioenergetics and Enhance Antioxidant Defense and Escape from Chemotherapy
|
journal
|
November 2020 |
Glutaminolysis is a metabolic dependency in FLT3ITD acute myeloid leukemia unmasked by FLT3 tyrosine kinase inhibition
|
journal
|
April 2018 |
Red Blood Cell Metabolic Responses to Torpor and Arousal in the Hibernator Arctic Ground Squirrel
|
journal
|
February 2019 |
Bioconductor: open software development for computational biology and bioinformatics
|
journal
|
September 2004 |
ATM/G6PD-driven redox metabolism promotes FLT3 inhibitor resistance in acute myeloid leukemia
|
journal
|
October 2016 |
Glutaminase inhibition improves FLT3 inhibitor therapy for acute myeloid leukemia
|
journal
|
February 2018 |
Complex heatmaps reveal patterns and correlations in multidimensional genomic data
|
journal
|
May 2016 |
Tumor cells can follow distinct evolutionary paths to become resistant to epidermal growth factor receptor inhibition
|
journal
|
February 2016 |
Cdc7 kinase stimulates Aurora B kinase in M-phase
|
journal
|
December 2019 |
FGF2-FGFR1 signaling regulates release of Leukemia-Protective exosomes from bone marrow stromal cells
|
journal
|
February 2019 |
Inhibition of Amino Acid Metabolism Selectively Targets Human Leukemia Stem Cells
|
journal
|
November 2018 |
Nicotinamide Metabolism Mediates Resistance to Venetoclax in Relapsed Acute Myeloid Leukemia Stem Cells
|
journal
|
November 2020 |
A noncanonical FLT3 gatekeeper mutation disrupts gilteritinib binding and confers resistance
|
journal
|
April 2021 |
Spectral Probabilities and Generating Functions of Tandem Mass Spectra: A Strike against Decoy Databases
|
journal
|
August 2008 |
MS-GF+ makes progress towards a universal database search tool for proteomics
|
journal
|
October 2014 |
Robust rank aggregation for gene list integration and meta-analysis
|
journal
|
January 2012 |
Stromal cells prevent apoptosis of AML cells by up-regulation of anti-apoptotic proteins
|
journal
|
August 2002 |
Therapeutic targeting of microenvironmental interactions in leukemia: Mechanisms and approaches
|
journal
|
August 2009 |
Distinct protein signatures of acute myeloid leukemia bone marrow-derived stromal cells are prognostic for patient survival
|
journal
|
March 2018 |
BCL-2 Inhibition Targets Oxidative Phosphorylation and Selectively Eradicates Quiescent Human Leukemia Stem Cells
|
journal
|
March 2013 |
Selected reaction monitoring for quantitative proteomics: a tutorial
|
journal
|
January 2008 |
Fast gapped-read alignment with Bowtie 2
|
journal
|
March 2012 |
Inhibition of Casein Kinase 1 Alpha Prevents Acquired Drug Resistance to Erlotinib in EGFR-Mutant Non–Small Cell Lung Cancer
|
journal
|
October 2015 |
voom: precision weights unlock linear model analysis tools for RNA-seq read counts
|
journal
|
January 2014 |
MAGeCK enables robust identification of essential genes from genome-scale CRISPR/Cas9 knockout screens
|
journal
|
December 2014 |
Using antagonistic pleiotropy to design a chemotherapy-induced evolutionary trap to target drug resistance in cancer
|
journal
|
March 2020 |
Skyline: an open source document editor for creating and analyzing targeted proteomics experiments
|
journal
|
February 2010 |
Cutadapt removes adapter sequences from high-throughput sequencing reads
|
journal
|
May 2011 |
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
|
journal
|
July 2010 |
The Ensembl Variant Effect Predictor
|
journal
|
June 2016 |
Clonal Selection with RAS Pathway Activation Mediates Secondary Clinical Resistance to Selective FLT3 Inhibition in Acute Myeloid Leukemia
|
journal
|
May 2019 |
Overcoming adaptive therapy resistance in AML by targeting immune response pathways
|
journal
|
September 2019 |
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry
|
journal
|
July 2018 |
MASIC: A software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC–MS(/MS) features
|
journal
|
June 2008 |
Phosphatidylinositol 3-kinase (PI3Kα)/AKT axis blockade with taselisib or ipatasertib enhances the efficacy of anti-microtubule drugs in human breast cancer cells
|
journal
|
August 2017 |
The TP53 Apoptotic Network Is a Primary Mediator of Resistance to BCL2 Inhibition in AML Cells
|
journal
|
May 2019 |
A three-minute method for high-throughput quantitative metabolomics and quantitative tracing experiments of central carbon and nitrogen pathways: Three-minute semi-targeted metabolomics
|
journal
|
March 2017 |
High-Throughput Metabolomics: Isocratic and Gradient Mass Spectrometry-Based Methods
|
book
|
January 2019 |
Identification of small molecules that support human leukemia stem cell activity ex vivo
|
journal
|
February 2014 |
Monocytic Subclones Confer Resistance to Venetoclax-Based Therapy in Patients with Acute Myeloid Leukemia
|
journal
|
January 2020 |
Gilteritinib or Chemotherapy for Relapsed or Refractory FLT3 -Mutated AML
|
journal
|
October 2019 |
Residual tissue repositories as a resource for population-based cancer proteomic studies
|
journal
|
August 2018 |
Role of MSC-derived galectin 3 in the AML microenvironment
|
journal
|
July 2018 |
FLT3 ligand impedes the efficacy of FLT3 inhibitors in vitro and in vivo
|
journal
|
March 2011 |
Metabolic adaptation of acute lymphoblastic leukemia to the central nervous system microenvironment depends on stearoyl-CoA desaturase
|
journal
|
September 2020 |
Aurora kinase A drives the evolution of resistance to third-generation EGFR inhibitors in lung cancer
|
journal
|
November 2018 |
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
|
journal
|
November 2003 |
A Chromatin-Mediated Reversible Drug-Tolerant State in Cancer Cell Subpopulations
|
journal
|
April 2010 |
Oncogene addiction: setting the stage for molecularly targeted cancer therapy
|
journal
|
December 2007 |
MEK inhibitors block growth of lung tumours with mutations in ataxia–telangiectasia mutated
|
journal
|
December 2016 |
Crenolanib is a selective type I pan-FLT3 inhibitor
|
journal
|
March 2014 |
FLT3 D835 mutations confer differential resistance to type II FLT3 inhibitors
|
journal
|
June 2015 |
Heterogeneous resistance to quizartinib in acute myeloid leukemia revealed by single-cell analysis
|
journal
|
July 2017 |
Validation of ITD mutations in FLT3 as a therapeutic target in human acute myeloid leukaemia
|
journal
|
April 2012 |
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
|
journal
|
January 2015 |
Mechanisms of disseminated cancer cell dormancy: an awakening field
|
journal
|
August 2014 |
Fatty acid metabolism underlies venetoclax resistance in acute myeloid leukemia stem cells
|
journal
|
October 2020 |
The role of FLT3 in haematopoietic malignancies
|
journal
|
September 2003 |
GLay: community structure analysis of biological networks
|
journal
|
November 2010 |
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
|
journal
|
November 2018 |
Gilteritinib is a clinically active FLT3 inhibitor with broad activity against FLT3 kinase domain mutations
|
journal
|
February 2020 |
Activation of the FGF2-FGFR1 Autocrine Pathway: A Novel Mechanism of Acquired Resistance to Gefitinib in NSCLC
|
journal
|
March 2013 |
Ponatinib overcomes FGF2-mediated resistance in CML patients without kinase domain mutations
|
journal
|
March 2014 |
FGF2 from Marrow Microenvironment Promotes Resistance to FLT3 Inhibitors in Acute Myeloid Leukemia
|
journal
|
September 2016 |
Combined EGFR/MEK Inhibition Prevents the Emergence of Resistance in EGFR -Mutant Lung Cancer
|
journal
|
June 2015 |
The Perseus computational platform for comprehensive analysis of (prote)omics data
|
journal
|
June 2016 |
Functional genomic landscape of acute myeloid leukaemia
|
journal
|
October 2018 |
A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia
|
journal
|
October 2016 |
Induction of a Timed Metabolic Collapse to Overcome Cancer Chemoresistance
|
journal
|
September 2020 |
Roles of the bone marrow niche in hematopoiesis, leukemogenesis, and chemotherapy resistance in acute myeloid leukemia
|
journal
|
June 2018 |
Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells
|
journal
|
April 2011 |
A mechanism of resistance to gefitinib mediated by cellular reprogramming and the acquisition of an FGF2-FGFR1 autocrine growth loop
|
journal
|
March 2013 |
CANCER: Enhanced: Addiction to Oncogenes--the Achilles Heal of Cancer
|
journal
|
July 2002 |
Using combination therapy to override stromal-mediated chemoresistance in mutant FLT3-positive AML: synergism between FLT3 inhibitors, dasatinib/multi-targeted inhibitors and JAK inhibitors
|
journal
|
April 2012 |
Widespread potential for growth-factor-driven resistance to anticancer kinase inhibitors
|
journal
|
July 2012 |
The KSEA App: a web-based tool for kinase activity inference from quantitative phosphoproteomics
|
journal
|
June 2017 |
Bone marrow stroma-mediated resistance to FLT3 inhibitors in FLT3-ITD AML is mediated by persistent activation of extracellular regulated kinase
|
journal
|
October 2013 |
The Hepatic Microenvironment Uniquely Protects Leukemia Cells through Induction of Growth and Survival Pathways Mediated by LIPG
|
journal
|
October 2020 |
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
|
journal
|
June 2009 |
Targeting the leukemia microenvironment by CXCR4 inhibition overcomes resistance to kinase inhibitors and chemotherapy in AML
|
journal
|
June 2009 |
Integrated analysis of patient samples identifies biomarkers for venetoclax efficacy and combination strategies in acute myeloid leukemia
|
journal
|
August 2020 |
Clinical resistance to crenolanib in acute myeloid leukemia due to diverse molecular mechanisms
|
journal
|
January 2019 |
Exploiting Temporal Collateral Sensitivity in Tumor Clonal Evolution
|
journal
|
March 2016 |