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The replication initiator of the cholera pathogen's second chromosome shows structural similarity to plasmid initiators

Journal Article · · Nucleic Acids Research
DOI:https://doi.org/10.1093/nar/gkw1288· OSTI ID:1783960
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Research Organization:
Brookhaven National Lab. (BNL), Upton, NY (United States)
Sponsoring Organization:
~OTHER
DOE Contract Number:
SC0012704
OSTI ID:
1783960
Report Number(s):
BNL-221491-2021-JACI
Journal Information:
Nucleic Acids Research, Journal Name: Nucleic Acids Research
Country of Publication:
United States
Language:
English

References (67)

DNA replication initiation: mechanisms and regulation in bacteria journal May 2007
oriC-encoded instructions for the initiation of bacterial chromosome replication journal January 2015
Regulation of DnaA Assembly and Activity: Taking Directions from the Genome journal October 2011
Differentiation of the DnaA- oriC Subcomplex for DNA Unwinding in a Replication Initiation Complex journal August 2012
Bacterial replication, transcription and translation: mechanistic insights from single-molecule biochemical studies journal April 2013
Principles and Concepts of DNA Replication in Bacteria, Archaea, and Eukarya journal July 2013
The orisome: structure and function journal June 2015
Replication initiation at the Escherichia coli chromosomal origin journal October 2011
The right half of the Escherichia coli replication origin is not essential for viability, but facilitates multi-forked replication journal October 2009
DnaA structure, function, and dynamics in the initiation at the chromosomal origin journal September 2009
The Fis Protein Has a Stimulating Role in Initiation of Replication in Escherichia coli In Vivo journal December 2013
Beyond DnaA: The Role of DNA Topology and DNA Methylation in Bacterial Replication Initiation journal June 2014
DNA stretching by bacterial initiators promotes replication origin opening journal October 2011
Origin Remodeling and Opening in Bacteria Rely on Distinct Assembly States of the DnaA Initiator journal July 2010
Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling journal July 2006
Eukaryotic DNA replication control: Lock and load, then fire journal December 2009
The origin recognition complex protein family journal January 2009
Regulatory Cross-Talk Links Vibrio cholerae Chromosome II Replication and Segregation journal July 2011
Independent Control of Replication Initiation of the Two Vibrio cholerae Chromosomes by DnaA and RctB journal August 2006
Distinct Replication Requirements for the Two Vibrio cholerae Chromosomes journal August 2003
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae journal August 2000
rctB mutations that increase copy number of Vibrio cholerae oriCII in Escherichia coli journal November 2012
Replication regulation of Vibrio cholerae chromosome II involves initiator binding to the origin both as monomer and as dimer journal March 2012
Molecular Dissection of the Essential Features of the Origin of Replication of the Second Vibrio cholerae Chromosome journal July 2015
Targeting the Replication Initiator of the Second Vibrio Chromosome: Towards Generation of Vibrionaceae-Specific Antimicrobial Agents journal November 2009
DNA Adenine Methylation Is Required to Replicate Both Vibrio cholerae Chromosomes Once per Cell Cycle journal May 2010
Transition from a plasmid to a chromosomal mode of replication entails additional regulators journal March 2011
A 29-mer site regulates transcription of the initiator gene as well as function of the replication origin of Vibrio cholerae chromosome II journal March 2012
Atomic Structures of the Human Immunophilin FKBP-12 Complexes with FK506 and Rapamycin journal January 1993
Crystal Structure of Bacillus stearothermophilus UvrA Provides Insight into ATP-Modulated Dimerization, UvrB Interaction, and DNA Binding journal January 2008
Distinct Centromere-Like parS Sites on the Two Chromosomes of Vibrio spp. journal May 2007
A Robust, Detergent-Friendly Method for Mass Spectrometric Analysis of Integral Membrane Proteins journal November 2000
NMRPipe: A multidimensional spectral processing system based on UNIX pipes journal November 1995
PHENIX: a comprehensive Python-based system for macromolecular structure solution journal January 2010
Features and development of Coot journal March 2010
Dali server: conservation mapping in 3D journal May 2010
The EBI Search engine: providing search and retrieval functionality for biological data from EMBL-EBI journal April 2015
Overview of the CCP 4 suite and current developments journal March 2011
Validation of protein models from Cα coordinates alone journal October 1997
Use of Non-crystallographic Symmetry in Protein Structure Refinement journal July 1996
The atomic structure of protein-protein recognition sites 1 1Edited by A. R. Fersht journal February 1999
Crystal structure of   initiator protein-iteron complex of plasmid R6K: Implications for initiation of plasmid DNA replication journal November 2006
Structural basis for regulation of bifunctional roles in replication initiator protein journal November 2007
Crystal structure of a prokaryotic replication initiator protein bound to DNA at 2.6 A resolution journal September 1999
A conformational switch between transcriptional repression and replication initiation in the RepA dimerization domain
  • Giraldo, Rafael; Fernández-Tornero, Carlos; Evans, Philip R.
  • Nature Structural & Molecular Biology, Vol. 10, Issue 7 https://doi.org/10.1038/nsb937
journal May 2003
Initiator protein dimerization plays a key role in replication control of Vibrio cholerae chromosome 2 journal August 2014
Mini-F plasmid mutants able to replicate in Escherichia coli deficient in the DnaJ heat shock protein. journal September 1992
Reconstitution of R6K DNA Replication in Vitro Using 22 Purified Proteins journal September 2003
Crystal Structure of Bacteriophage λcII and Its DNA Complex journal July 2005
Nuclear-receptor interactions on DNA-response elements journal June 2001
Retinoid X receptor and its partners in the nuclear receptor family journal February 2001
Structural determinants of nuclear receptor assembly on DNA direct repeats journal May 1995
Structure of the RXR–RAR DNA-binding complex on the retinoic acid response element DR1 journal March 2000
Structural basis of VDR-DNA interactions on direct repeat response elements journal May 2002
Structural basis of androgen receptor binding to selective androgen response elements journal March 2004
Chromosome dynamics in multichromosome bacteria journal July 2012
Monomerization of RepA dimers by heat shock proteins activates binding to DNA replication origin. journal September 1991
MicroReview: Divided genomes: negotiating the cell cycle in prokaryotes with multiple chromosomes: Multiple chromosomes in prokaryotes journal March 2005
Management of multipartite genomes: the Vibrio cholerae model journal December 2014
Basic Local Alignment Search Tool journal October 1990
Amino acid substitution matrices from protein blocks. journal November 1992
Structural and Mechanistic Basis of Zinc Regulation Across the E. coli Zur Regulon journal November 2014
Structure of the LexA–DNA complex and implications for SOS box measurement journal August 2010
On the Transcriptional Regulation of Methicillin Resistance: MecI REPRESSOR IN COMPLEX WITH ITS OPERATOR journal February 2004
Crystal Structures, Metal Activation, and DNA-Binding Properties of Two-Domain IdeR from Mycobacterium tuberculosis † , ‡ journal January 2007
Crystal Structures of SlyA Protein, a Master Virulence Regulator of Salmonella , in Free and DNA-bound States journal May 2011
Water-mediated interactions between DNA and PhoB DNA-binding/transactivation domain: NMR-restrained molecular dynamics in explicit water environment journal January 2008

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