Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions

Name: Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions
Published: Thu Jul 09 00:00:00 EDT 2020

St. James, Andrew

doi:10.25982/51077.6/1637903

Title: Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions

Dataset · Thu Jul 09 00:00:00 EDT 2020

DOI:https://doi.org/10.25982/51077.6/1637903· OSTI ID:1637903

^[1]

Cornell Univ., Ithaca, NY (United States)

This Narrative is part of a collection used in a single publication. The paper took a metagnomic and metatranscriptomic approach to examine a bioreactor's response to the presence of sulfate, which reduces the production of methane, a valuable product, while producing hydrogen sulfide, a corrosive contaminant. This Narrative collection has been created to highlight the types of analyses done for this publication. They are as follows (in order): SJ1 Metagenomes: a metagenomic analysis of sample SJ1, the initial bioreactor. SJ1 Metatranscriptomes: QC-filtered raw RNA reads were aligned to individual MAGs and assembled into transcripts. Metagenome-discovered food webs in a long-term methanogenic bioreactor and rapid switch to sulfate reducing conditions (this Narrative): the public Narrative referenced in the paper, which contains several key MAGs.

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Research Organization:: Cornell Univ., Ithaca, NY (United States); Department of Energy Systems Biology Knowledgebase; Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States); Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER)

DOE Contract Number:: AC02–05CH11231

OSTI ID:: 1637903

Resource Relation:: Related Information: Andrew R St. James, Ruth E Richardson. Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions, FEMS Microbiology Ecology, Volume 96, Issue 5, May 2020, https://doi.org/10.1093/femsec/fiaa050

Country of Publication:: United States

Language:: English

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Title: Ecogenomics reveals community interactions in a long-term methanogenic bioreactor and a rapid switch to sulfate-reducing conditions

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References (37)

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